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2022 Fiscal Year Research-status Report

Specificities of cellular uptake of primary cilium-derived extracellular vesicles for intercellular communication

Research Project

Project/Area Number 21K15088
Research InstitutionHiroshima University

Principal Investigator

IJAZ FARYAL  広島大学, 医系科学研究科(医), 助教 (80845595)

Project Period (FY) 2021-04-01 – 2024-03-31
KeywordsPrimary Cilium / Ciliopathies
Outline of Annual Research Achievements

Cell-intrinsic mechanisms of ciliopathies have been well studied. In contrast, cell-extrinsic factors that underlie ciliopathies have barely been explored.
We investigated the effects of extracellular bioactive factors derived from wildtype NIH/3T3 cells culture supernatant on the migration/ proliferation of primary cilium-deficient NIH/3T3-Kif3a-KO cells after wounding. The factors derived from wildtype NIH/3T3 cells culture supernatant increased the rate of cell migration/proliferation in target cells as compared to the factors derived from primary cilium-deficient cells culture supernatant from NIH/3T3-Kif3a-KO cells and NIH/3T3-Dync2h1-KO cells. Furthermore, by omics analysis of the supernatants, we found a molecule that showed a decline in the culture supernatant of primary cilium-deficient cells. These findings suggest that fibroblasts regulate cellular migration/proliferation process in primary cilium-deficient target cells via cell-extrinsic regulatory mechanisms in a primary cilium-dependent manner.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

The project is rather going smoothly because we identified some of the factors involved in cell-extrinsic regulation of ciliopathies.

Strategy for Future Research Activity

Task1. Evaluation of secretion profile: Confirmation of biofactors and signaling pathways.
Task2. Generate invitro models of ciliopathies using human cell lines.

Causes of Carryover

The amount was meant to be used for service fee for RNA sequencing, however, there was some problems with sample analysis from the service company.
In FY2023, the amount will be used to pay the service fee after sample optimization for RNA- sequencing analysis. Rest will be used as paper publication fee.

  • Research Products

    (3 results)

All 2023 2022

All Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (1 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Time-lapse imaging of primary cilium behavior with physiological expression of fluorescent ciliary proteins2023

    • Author(s)
      Ryota Nakazato, Hiroshi Otani, Faryal Ijaz, Koji Ikegami
    • Journal Title

      Methods in Cell Biology

      Volume: 175 Pages: 45-68

    • DOI

      10.1016/bs.mcb.2022.10.003

    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A pair of primers facing at the double-strand break site enables to detect NHEJ-mediated indel mutations at a 1-bp resolution2022

    • Author(s)
      Faryal Ijaz, Ryota Nakazato, Mitsutoshi Setou & Koji Ikegami
    • Journal Title

      Scientific Reports

      Volume: 12 Pages: 1-12

    • DOI

      10.1038/s41598-022-15776-5

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Double-strand break Site-Targeted PCR coupled with high concentration TBE-PAGE enables to detect NHEJ-mediated indel mutations at a 1-bp resolution2022

    • Author(s)
      Faryal Ijaz
    • Organizer
      The 74th Annual Meeting of the Japan Society for Cell Biology
    • Int'l Joint Research

URL: 

Published: 2023-12-25  

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