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2012 Fiscal Year Final Research Report

Elucidation of relaxation and reaction dynamics using simulations of linear and nonlinear spectroscopy

Research Project

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Project/Area Number 22350013
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research InstitutionInstitute for Molecular Science

Principal Investigator

SAITO Shinji  分子科学研究所, 理論・計算分子科学研究領域, 教授 (70262847)

Project Period (FY) 2010 – 2012
Keywords化学反応
Research Abstract

For the understanding of ultrafast dynamics, we have investigated the fluctuations and energy relaxation dynamics of intra- and inter-molecular motions in liquid water by exploiting molecular dynamics simulations. In addition, we have examined chemical reaction dynamics in solutions and proteins. For the understanding of slow dynamics, we elucidated the molecular origin of the rapid increase in isobaric specific heat of water with decreasing temperature and revealed the relationship between the temperature dependence of the lifetime of dynamic heterogeneity and fragility based on the systematic analysis of the lifetime of heterogeneous dynamics in supercooled liquids.

  • Research Products

    (29 results)

All 2013 2012 2011 2010 Other

All Journal Article (14 results) (of which Peer Reviewed: 14 results) Presentation (8 results) Book (6 results) Remarks (1 results)

  • [Journal Article] Frequency dependence of specific heat in supercooled liquid water and emergence of correlated dynamics2013

    • Author(s)
      S. Saito, I. Ohmine, and B. Bagch
    • Journal Title

      J. Chem. Phys.

      Volume: 138 Pages: 094503

    • Peer Reviewed
  • [Journal Article] Molecular origin of the difference in the HOH bend of the IR spectra between liquid water and ice2013

    • Author(s)
      S. Imoto, S. S. Xantheas, and S. Saito
    • Journal Title

      J. Chem. Phys.

      Volume: 138 Pages: 054506

    • Peer Reviewed
  • [Journal Article] Theoretical and Experimental Studies on Vibrational Energy Relaxation of the CO Stretching Mode of Acetone in Alcohol Solutions2013

    • Author(s)
      M. Higashi, S. Hirai, M. Banno, K. Ohta, S. Saito, and K. Tominaga
    • Journal Title

      J. Phys. Chem.

      Volume: B,117 Pages: 4723-4731

    • Peer Reviewed
  • [Journal Article] Multiple Length and Time Scales of Dynamic Heterogeneities in Model Glass-Forming Liquids: A Systematic Analysis of Multi-Point and Multi-Time Correlations2013

    • Author(s)
      K. Kim and S. Saito
    • Journal Title

      J. Chem. Phys., Special Topic: Glass Transition

      Volume: 138 Pages: 12A506

    • Peer Reviewed
  • [Journal Article] Fluctuations and Relaxation Dynamics of Liquid Water Revealed by Linear and Nonlinear Spectroscopy2013

    • Author(s)
      T. Yagasaki and S. Saito
    • Journal Title

      Annu. Rev. Phys. Chem.

      Volume: 64 Pages: 55-75

    • Peer Reviewed
  • [Journal Article] Energy Relaxation of Intermolecular Motions in Supercooled Water and Ice: A Molecular Dynamics Study2011

    • Author(s)
      T. Yagasaki and S. Saito
    • Journal Title

      J. Chem. Phys.

      Volume: 135 Pages: 244511

    • Peer Reviewed
  • [Journal Article] Insights in Quantum Dynamical Effects in the Infrared Spectroscopy of Liquid Water from a Semiclassical Study with an Ab Initio-Based Flexible and Polarizable Force Field2011

    • Author(s)
      J. Liu, W. H. Miller, G. S. Fanourgakis, S. S. Xantheas, S. Imoto, and S. Saito
    • Journal Title

      J. Chem. Phys.

      Volume: 135 Pages: 244503 (14 pages)

    • Peer Reviewed
  • [Journal Article] Direct Simulation of Excited-State Intra molecular Proton Transfer and Vibrational Coherence of 10-Hydroxy benzo[h]quinoline in Solution2011

    • Author(s)
      M. Higashi and S. Saito
    • Journal Title

      J. Phys. Chem. Letters

      Volume: 2 Pages: 2366-2371

    • Peer Reviewed
  • [Journal Article] A Novel Method for Analyzing Energy Relaxation in Condensed Phases Using Nonequilibrium Molecular Dynamics Simulations: Application to the Energy Relaxation of Intermolecular Motions in Liquid Water2011

    • Author(s)
      T. Yagasaki and S. Saito
    • Journal Title

      J. Chem. Phys.

      Volume: 134 Pages: 184503 (9 pages)

    • Peer Reviewed
  • [Journal Article] Hidden Slow Time Scale of Correlated Motions in Supercooled Liquids: Multi-Time Correlation Function Approach2010

    • Author(s)
      K. Kim and S. Saito
    • Journal Title

      J. Non-Crystalline. Solids

      Volume: 357 Pages: 371-375

    • Peer Reviewed
  • [Journal Article] Effects of Nonadditive Interactions on Ion Solvation at the Water/Vapor Interface: A Molecular Dynamics Study2010

    • Author(s)
      T. Yagasaki, S. Saito, and I. Ohmine
    • Journal Title

      J. Phys. Chem. A

      Volume: 114 Pages: 12573-12584

    • Peer Reviewed
  • [Journal Article] Relation between Conformational Heterogeneity and Reaction Cycle of Ras: Molecular Simulation of Ras2010

    • Author(s)
      C. Kobayashi and S. Saito
    • Journal Title

      Biophys. J.

      Volume: 99 Pages: 3726-3734

    • Peer Reviewed
  • [Journal Article] Role of the Lifetime of Dynamic Heterogeneity in the Frequency Dependent Stokes-Einstein Relation of Supercooled Liquids2010

    • Author(s)
      K. Kim and S. Saito
    • Journal Title

      J. Phys. Soc. Jpn.

      Volume: 79 Pages: 093601 (4 pages)

    • Peer Reviewed
  • [Journal Article] Multi-Time Density Correlation Functions in Glass-Forming Liquids: Probing Dynamical Heterogeneity and its Lifetime2010

    • Author(s)
      K. Kim and S. Saito
    • Journal Title

      J. Chem. Phys.

      Volume: 133 Pages: 044511 (10 pages)

    • Peer Reviewed
  • [Presentation] Dynamics of Liquid and Supercooled Water2012

    • Author(s)
      S. Saito
    • Organizer
      Indo-Japan Bilateral Collaboration Seminar
    • Place of Presentation
      Hyderabad, India
    • Year and Date
      20121121-22
  • [Presentation] Relaxation and Fluctuation2012

    • Author(s)
      S. Saito
    • Organizer
      244th American Chemical Society National Meeting and Exposition
    • Place of Presentation
      Philadelphia, USA
    • Year and Date
      20120819-22
  • [Presentation] Chemical Reaction, Fluctuation, and Relaxation in Liquids2012

    • Author(s)
      S. Saito
    • Organizer
      Marie Curie IRSES meeting on "1st International Workshop on Computer Simulations of Thermally Excited Molecules and Materials by First Principles"
    • Place of Presentation
      Nagoya
    • Year and Date
      20120310-11
  • [Presentation] Dynamics of liquid water: Energy relaxation and fluctuation2012

    • Author(s)
      S. Saito
    • Organizer
      4th Japan-Korea Seminar on "Biomolecular Sciences: Experiments and Simulations"
    • Place of Presentation
      Nara
    • Year and Date
      20120109-11
  • [Presentation] 水の多次元分光法の理論計算-揺らぎ、緩和、物性-、テラヘルツ分光法の最先端V2011

    • Author(s)
      S. Saito
    • Organizer
      日本分光学会テラヘルツ分光部会
    • Place of Presentation
      パシフィコ横浜、Yokohama
    • Year and Date
      20110928-29
  • [Presentation] Dynamics in water and ice revealed by theoretical nonlinear IR spectroscopy2010

    • Author(s)
      S. Saito, and T. Yagasaki
    • Organizer
      Pacifichem
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      20101215-21
  • [Presentation] Ultrafast water dynamics and low heterogeneous dynamics robed by multi-time correlation functions2010

    • Author(s)
      T. Yagasaki, K. Kim, and S. Saito
    • Organizer
      5th International Conference on Coherent Multidimensional Spectroscopy
    • Place of Presentation
      University of Minnesota, USA
    • Year and Date
      20100818-20
  • [Presentation] Intermolecular dynamics in water: From normal liquid state to supercooled liquid state2010

    • Author(s)
      T. Yagasaki and S. Saito
    • Organizer
      Flemingfest: Frontiers in Condensed Phase Physical Chemistry
    • Place of Presentation
      Berkeley, USA
    • Year and Date
      20100615-16
  • [Book] Solvation Dynamics of Vibrational State in Hydrogen-bonding Solvents: Vibrational Frequency Fluctuation Studied by Three-Pulse Infrared Photon Echo Method in "Ultrafast Infrared Vibrational Spectroscopy"2013

    • Author(s)
      K. Ohta, J. Tayama, S. Saito, and K. Tominaga
    • Total Pages
      149-169
    • Publisher
      CRC press
  • [Book] 二次元赤外分光法の理論および水の分子間ダイナミックスの解析2012

    • Author(s)
      斉藤真司
    • Total Pages
      22-30
    • Publisher
      日本赤外線学会
  • [Book] 凝縮系の揺らぎ、緩和と分光法(CSJ カレントレビュー 08 巨大分子系の計算化学)2012

    • Author(s)
      斉藤真司
    • Total Pages
      76-81
    • Publisher
      化学同人
  • [Book] ミクロな水の性質:揺らぎ、相転移、反応、応用物理 802011

    • Author(s)
      大峯 巖、斉藤真司、松本正和
    • Total Pages
      0853-0861
  • [Book] 水の揺らぎと反応、化学と工業 642011

    • Author(s)
      大峯 巖、斉藤真司
    • Total Pages
      532
  • [Book] ガラス転移の動的不均一性とその時間スケール:多時間相関関数による解析、アンサンブル 122010

    • Author(s)
      金鋼、斉藤真司
    • Total Pages
      16-21
  • [Remarks]

    • URL

      http://dyna.ims.ac.jp/shinji/NewHP_Group/

URL: 

Published: 2014-08-29  

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