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2011 Fiscal Year Final Research Report

Molecular phylogeny using multiple nuclear gene sequences

Research Project

  • PDF
Project/Area Number 22657060
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Evolutionary biology
Research InstitutionNagoya City University

Principal Investigator

KUMAZAWA Yoshinori  名古屋市立大学, 大学院・システム自然科学研究科, 教授 (60221941)

Research Collaborator KURISAKI Masaki  名古屋市立大学, 大学院・システム自然科学研究科, 博士
Project Period (FY) 2010 – 2011
Keywords分子系統 / 次世代シーケンサー / 爬虫類 / ヘビ類 / 核ゲノム / cDNA
Research Abstract

We conducted high-throughput analyses using 4 squamate species and determined cDNA sequences of many highly expressed genes in the liver. Using the Blast analyses, we assessed the similarity of the cDNA representation between species, as well as the occurrence of paralogy for the highly expressed genes. Tree analyses suggested the phylogenetic position of snakes.

  • Research Products

    (9 results)

All 2012 2011 2010 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (4 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Characterization of squamate olfactory receptor genes and their transcripts by the high-throughput sequencing approach2012

    • Author(s)
      Dehara Y, Hashiguchi Y, Matsubara K, Yanai T, Kubo M and Kumazawa Y
    • Journal Title

      Genome Biology and Evolution

      Volume: 4(4) Pages: 602-616

    • DOI

      DOI:10.1093/gbe/evs041

    • Peer Reviewed
  • [Journal Article] Mitochondrial genomes of acrodont lizards : timing of gene rearrangements and phylogenetic and biogeographic implications2010

    • Author(s)
      Okajima Y and Kumazawa Y
    • Journal Title

      BMC Evolutionary Biology

      Volume: 10 Pages: 141

    • DOI

      DOI:10.1186/1471-2148-10-141

    • Peer Reviewed
  • [Presentation] 有鱗目におけるトランスクリプトームプロファイル:核遺伝子を用いた系統解析を目指して2011

    • Author(s)
      栗崎政希、松原和純、鳥羽通久、熊澤慶伯
    • Organizer
      日本進化学会第13回大会
    • Place of Presentation
      京都大学(京都市)
    • Year and Date
      2011-08-30
  • [Presentation] 次世代シーケンシングによる新規ミトコンドリアゲノム配列決定の効率性と正確性2011

    • Author(s)
      熊澤慶伯
    • Organizer
      日本進化学会第13回大会
    • Place of Presentation
      京都大学(京都市)
    • Year and Date
      2011-08-30
  • [Presentation] 中-新生代の大陸移動と爬虫類の進化2010

    • Author(s)
      熊澤慶伯
    • Organizer
      日本進化学会第12回大会「大陸移動と動物の進化2億年」シンポジウム
    • Place of Presentation
      東京工業大学(東京都)
    • Year and Date
      2010-08-05
  • [Presentation] Molecular phylogeny and biogeography of lizards2010

    • Author(s)
      Kumazawa Y and Okajima Y
    • Organizer
      The International Symposium on Biodiversity Sciences 2010 "Genome, Evolution and Environment"
    • Place of Presentation
      ルブラ王山ホテル(名古屋市)
    • Year and Date
      2010-08-01
  • [Book] 第2版古生物学事典、日本古生物学会編2010

    • Author(s)
      熊澤慶伯
    • Total Pages
      211, 338, 444-445, 476-477, 584
    • Publisher
      朝倉書店
  • [Book] 第1版生物の事典2010

    • Author(s)
      熊澤慶伯、石原勝敏・末光隆
    • Total Pages
      43-45, 47-49, 560
    • Publisher
      朝倉書店
  • [Remarks]

    • URL

      http://www.nsc.nagoya-cu.ac.jp/~kuma/

URL: 

Published: 2013-07-31  

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