2011 Fiscal Year Final Research Report
RNA interactome prediction in eukaryotic genomes
| Project/Area Number |
22700304
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| Research Category |
Grant-in-Aid for Young Scientists (B)
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| Allocation Type | Single-year Grants |
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| Research Field |
Bioinformatics/Life informatics
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| Research Institution | Hirosaki University |
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Principal Investigator |
TANEDA Akito 弘前大学, 大学院・理工学研究科, 准教授 (70332492)
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| Project Period (FY) |
2010 – 2011
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| Keywords | 生体生命情報学 / RNA工学 / ゲノム / 遺伝子 |
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| Research Abstract |
We have developed computational RNA sequence analysis tools including a prediction system for RNA sequence alignment and an RNA sequence design method on the basis of multi-objective genetic algorithm. Alignments and secondary structures predicted by our system can give useful information for RNA-RNA interaction prediction. Moreover, our RNA sequence design method can be applied to RNA device design problems which are difficult for the other previous RNA sequence design methods.
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