• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2011 Fiscal Year Final Research Report

Single-Molecules Tunnel-Current Imaging for DNA duplex by using STM.

Research Project

  • PDF
Project/Area Number 22750078
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Analytical chemistry
Research InstitutionOsaka University

Principal Investigator

OHSHIRO Takahito  大阪大学, 産業科学研究所, 特任助教(常勤) (10462665)

Project Period (FY) 2010 – 2011
Keywords表面分析 / DNA / 走査型トンネル顕微鏡 / 電気計測
Research Abstract

I developed methods on single-molecule tunnel-current identification with STM and nanogap-electrode. By using these methods, the electron-conductance values were determined for perfect-matched and miss-matched DNA duplexes, and single DNA/ RNA nucleotides, and post-transcriptional modified-nucleotides. Based on these relative conductance values, the sequence of oligonucleotides was successfully determined. In addition, methodologies, for a molecule-control by using nanopore, molecule-recognition by using photonic waveguide, and a construction of DNA-based nanostructures, were also developed.

  • Research Products

    (20 results)

All 2012 2011 2010

All Journal Article (7 results) (of which Peer Reviewed: 7 results) Presentation (13 results)

  • [Journal Article] Synthesis and Chracterization of Small Circular Double-Stranded RNAs2011

    • Author(s)
      N. Ito, H. Abe, T. Ohshiro, Y. Nakashima, M. Maeda, and Y. Ito
    • Journal Title

      Chemical Communication.

      Volume: 47巻 Pages: 2125-2127

    • Peer Reviewed
  • [Journal Article] Electrical detection of single methylcytosines in a DNA oligomer.2011

    • Author(s)
      M. Tsutsui., K. Matsubara, T. Ohshiro, M. Furuhashi, M. Taniguchi, T. Kawai
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 133巻 Pages: 9124-9128

    • Peer Reviewed
  • [Journal Article] Synthsis, Structure, and Biological Activity of Dumbbell-Shaped Nanocircular RNAs for RNA Interference2011

    • Author(s)
      N. Abe, H. Abe, C. Nagai, M. Harada, H. Hatakeyama, H. Harashima, T. Ohshiro, M. Nishihara, K. Furukawa, M. Maeda, S. Tsuneda, Y. Ito
    • Journal Title

      Bioconjugate Chemistry

      Volume: 22巻 Pages: 2082-2092

    • Peer Reviewed
  • [Journal Article] Development of microfabricated TiO2 channel wave guides2011

    • Author(s)
      M. Furuhashi, M. Fujiwara, T. Ohshiro, M. Tsutsui, K. Matsubara, M. Taniguchi, T. Kawai
    • Journal Title

      AIP Advances

      Volume: 1巻 Pages: 032102

    • Peer Reviewed
  • [Journal Article] Single-Molecule Imaging of DNA Duplex Immobilized on Surfaces with Scanning Tunneling Microscope2010

    • Author(s)
      T. Ohshiro, M. Mizuo
    • Journal Title

      Chemical Communication

      Volume: 46巻 Pages: 2581-2583

    • Peer Reviewed
  • [Journal Article] A Facile Method Towards Cyclic Assembly of Gold Nanoparticles Using DNA Template Alone2010

    • Author(s)
      T. Ohshiro, T. Zako, R. Watanabe-Tamaki, T. Tanaka, Mizuo, S
    • Journal Title

      Chemical Communication

      Volume: 46巻 Pages: 6132-6134

    • Peer Reviewed
  • [Journal Article] Atomically controlled fabrications of subnanometer scale electrode gaps2010

    • Author(s)
      M. Tustsui, T. Ohshiro
    • Journal Title

      J. Appl. Phys.

      Volume: 108巻 Pages: 064312

    • Peer Reviewed
  • [Presentation] トンネル電流を指標とした単分子DNA/ RNA配列決定法の開発2012

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      日本化学会第92春季年会
    • Place of Presentation
      慶応大学(神奈川)
    • Year and Date
      2012-03-28
  • [Presentation] Single-Molecule Identification of DNA/ RNA Towards Tunnel-Current Based Genome Sequencing2012

    • Author(s)
      Takahito Ohshiro, Kazuki Matsubara, Makusu Tsutsui, Masayuki Furuhashi, Masateru Taniguchi, Tomoji Kawai
    • Organizer
      International Symposium on Innovative Nano-Biodevices(ISIN2012)
    • Place of Presentation
      Nagoya University(Nagoya)
    • Year and Date
      2012-03-21
  • [Presentation] ゲーティングナノデバイスによる単一バイオ分子計測2012

    • Author(s)
      大城敬人, 佐々木優太, 筒井真楠, 川野, 谷口正輝, 川合知二
    • Organizer
      第59回応用物理学関係連合講演会
    • Place of Presentation
      早稲田大学(東京)
    • Year and Date
      2012-03-16
  • [Presentation] トンネル電流による単分子DNA/ RNAの配列決定2011

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      日本分析化学第60回年回
    • Place of Presentation
      名古屋大学(名古屋)
    • Year and Date
      2011-09-14
  • [Presentation] トンネル電流を指標とした単分子DNA/ RNA鎖の配列決定2011

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      第72回応用物理学
    • Place of Presentation
      山形大学(山形)
    • Year and Date
      2011-08-25
  • [Presentation] Single-Molecule Tunnel-Current Detection Towards a Sequencing of Oligonucleotides, Global Technology Congress2011

    • Author(s)
      Takahito Ohshiro, Kazuki Matsubara, Makusu Tsutsui, Masayuki Furuhashi, Masateru Taniguchi, Tomoji Kawai
    • Organizer
      1^<st> Next Generation Sequencer Congress
    • Place of Presentation
      Hyatt at Fisherman' s Wharf(San Francisco, USA)
    • Year and Date
      2011-07-06
  • [Presentation] トンネル電流を指標とした神経伝達分子の単分子計測2011

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(横浜)
    • Year and Date
      2011-03-26
  • [Presentation] トンネル電流を指標とした単分子DNAコドンの配列決定2011

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      第58回応用物理学関係連合講演会
    • Place of Presentation
      神奈川工科大(厚木)
    • Year and Date
      2011-03-24
  • [Presentation] Single-Molecule Identification of DNA/ RNA Towards Tunnel-Current Based Genome Sequencing2011

    • Author(s)
      Takahito Ohshiro, Kazuki Matsubara, Makusu Tsutsui, Masayuki Furuhashi, Masateru Taniguchi, Tomoji Kawai
    • Organizer
      International Symposium : Advanced Science and Technology for Single Molecular Analysis of DNA and Rerated Molecules(ISSMA2011)
    • Place of Presentation
      Kyoto International Convention Center(Kyoto, Japan)
    • Year and Date
      2011-01-22
  • [Presentation] Single-molecule Imaging of DNA Immobilized on Surfaces with Scanning Tunneling Microscope2010

    • Author(s)
      Takahito Ohshiro, Mizuo Maeda
    • Organizer
      Pacifichem 2011
    • Place of Presentation
      Hawaii Convention Center(Hawaii, USA)
    • Year and Date
      2010-12-18
  • [Presentation] Single-Molecule Identification of DNA/ RNA Towards Tunnel-Current based Genome Sequencing2010

    • Author(s)
      Takahito Ohshiro, Kazuki Matsubara, Makusu Tsutsui, Masayuki Furuhashi, Masateru Taniguchi, Tomoji Kawai
    • Organizer
      7^<th> Handai Nanoscience and Nanotecnonology International Sympisium
    • Place of Presentation
      Osaka University(Osaka, Japan)
    • Year and Date
      2010-11-10
  • [Presentation] トンネル電流を指標とした生理活性核酸分子の単分子計測2010

    • Author(s)
      大城敬人, 松原一喜, 筒井真楠, 古橋匡幸, 谷口正輝, 川合知二
    • Organizer
      第71回応用物理学会
    • Place of Presentation
      長崎大学(長崎)
    • Year and Date
      2010-09-08
  • [Presentation] 走査型トンネル顕微鏡による基板上に固定したDNA二重鎖の単分子観察2010

    • Author(s)
      大城敬人, 前田瑞夫
    • Organizer
      第59回高分子年会
    • Place of Presentation
      国際フォーラム(横浜)
    • Year and Date
      2010-05-26

URL: 

Published: 2013-07-31   Modified: 2014-12-10  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi