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2011 Fiscal Year Final Research Report

Comparative transcriptome and methylome study in humans and chimpanzees

Research Project

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Project/Area Number 22770240
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Physical anthropology
Research InstitutionKyoto University

Principal Investigator

GO Yasuhiro  京都大学, 霊長類研究所, 助教 (50377123)

Project Period (FY) 2010 – 2011
Keywords進化 / 霊長類 / ゲノム / 遺伝子発現 / チンパンジー / トランスクリプトーム
Research Abstract

Whole transcriptome analyses were performed in a human and chimpanzee trio(father. mother. child) by quantifying mRNA level in each individual. Combined polymorphic information in parents and children with the amount of allele specific gene expression in children, we can quantify allele specific gene expression in children with known parental origin. The result reveals that around 17% of genes show allele biased expression in a chimpanzee child.

  • Research Products

    (29 results)

All 2012 2011 2010 Other 0

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (23 results) Book (2 results) Remarks (1 results)

  • [Journal Article] Diversification of bitter taste receptor gene family in wester nchimpanzees2011

    • Author(s)
      Toru Sugawara, Yasuhiro Go, Toshifumi Udono, Naruki Morimura, Masaki Tomonaga, Hirohisa Hirai, and Hiroo Imai
    • Journal Title

      Mol. Biol. Evol

      Volume: 28 Pages: 921-931

    • DOI

      DOI:10.1093/molbev/msq279

    • Peer Reviewed
  • [Journal Article] Identification of non-taster Japanese macaques for aspecific bitter taste2010

    • Author(s)
      Nami Suzuki, Toru Sugawara, Atsushi Matsui, Yasuhiro Go, Hirohisa Hirai, and Hiroo Imai
    • Journal Title

      Primates

      Volume: 51 Pages: 285-289

    • DOI

      DOI:10.1007/s10329-010-0209-3

    • Peer Reviewed
  • [Journal Article] Degeneration of olfactory receptor gene repertories in primates : no direct link to full trichromatic vision.2010

    • Author(s)
      Atsushi Matsui, Yasuhiro Go
    • Journal Title

      Mol. Biol. Evol

      Volume: 27 Pages: 1192-1200

    • DOI

      DOI:10.1093/molbev/msq003

    • Peer Reviewed
  • [Presentation] チンパンジーの味覚に地域差はあるか?~分子遺伝学からの考察~2011

    • Author(s)
      早川卓志
    • Organizer
      SAGA14
    • Place of Presentation
      熊本
    • Year and Date
      2011-11-12
  • [Presentation] Comparative transcriptome and genome analysis in a chimpanzee trio2011

    • Author(s)
      Yasuhiro Go
    • Organizer
      International Symposium of Developmental Systems Biologyon Gene Regulation and Aging
    • Place of Presentation
      Shanghai, China
    • Year and Date
      2011-10-13
  • [Presentation] コモンマーモセットにおける消化器系での味覚情報伝達物質の定量的解析2011

    • Author(s)
      権田彩
    • Organizer
      第45回味と匂い学会大会
    • Place of Presentation
      金沢
    • Year and Date
      2011-10-06
  • [Presentation] ニホンザルエキソーム解析-実験動物化にむけた遺伝的バックグラウンドの解明2011

    • Author(s)
      郷康広
    • Organizer
      日本進化学会第13回大会
    • Place of Presentation
      京都
    • Year and Date
      2011-07-30
  • [Presentation] ニホンザルにおける地域特異的な苦味感受性変異2011

    • Author(s)
      鈴木南美
    • Organizer
      日本進化学会第13回大会
    • Place of Presentation
      京都
    • Year and Date
      2011-07-30
  • [Presentation] チンパンジー3亜種における苦味受容体遺伝子ファミリーの分子進化2011

    • Author(s)
      早川卓志
    • Organizer
      日本進化学会第13回大会
    • Place of Presentation
      京都
    • Year and Date
      2011-07-30
  • [Presentation] ゲノムを通して我が身を知る-ヒトとチンパンジーの間にあるもの2011

    • Author(s)
      郷康広
    • Organizer
      第27回日本霊長類学会大会
    • Place of Presentation
      犬山
    • Year and Date
      2011-07-18
  • [Presentation] ニホンザルにおける苦味受容体TAS2R38の地域特異的な感受性変異2011

    • Author(s)
      鈴木南美
    • Organizer
      第27回日本霊長類学会大会
    • Place of Presentation
      犬山
    • Year and Date
      2011-07-17
  • [Presentation] チンパンジー3亜種における苦味受容体遺伝子ファミリーの分子進化2011

    • Author(s)
      早川卓志
    • Organizer
      第27回日本霊長類学会大会
    • Place of Presentation
      犬山
    • Year and Date
      2011-07-17
  • [Presentation] ニホンザルエクソーム解析-実験動物化にむけた遺伝的バックグラウンドの解明-2011

    • Author(s)
      郷康広
    • Organizer
      第27回日本霊長類学会大会
    • Place of Presentation
      犬山
    • Year and Date
      2011-07-17
  • [Presentation] 霊長類における味覚受容体の進化2010

    • Author(s)
      郷康広
    • Organizer
      第82回日本遺伝学会
    • Place of Presentation
      札幌
    • Year and Date
      2010-09-22
  • [Presentation] Evolutionary dynamics of bitter taste receptor gene repertoires in primates2010

    • Author(s)
      Yasuhiro Go
    • Organizer
      European Chemoreception Research Organization XXth CONGRESS
    • Place of Presentation
      Avignon, France
    • Year and Date
      2010-09-18
  • [Presentation] Genetic Polymorphismin Sensory Receptor Genesof Primates2010

    • Author(s)
      Nami Suzuki
    • Organizer
      The 4th International Symposium of the Biodiversity and Evolution Global COE project
    • Place of Presentation
      Kyoto
    • Year and Date
      2010-09-12
  • [Presentation] チンパンジー亜種集団間における苦味受容体遺伝子配列の比較解2010

    • Author(s)
      早川卓志
    • Organizer
      第12回日本進化学会大会
    • Place of Presentation
      東京
    • Year and Date
      2010-08-04
  • [Presentation] チンパンジー親子トリオトランスクリプトーム解析による遺伝子発現制御機構の解明2010

    • Author(s)
      郷康広
    • Organizer
      第12回日本進化学会
    • Place of Presentation
      東京
    • Year and Date
      2010-08-03
  • [Presentation] Comparative transcriptome analysis in a chimpanzee trio2010

    • Author(s)
      Yasuhiro Go
    • Organizer
      Society Molecular Biology and Evolution
    • Place of Presentation
      Lyon, France
    • Year and Date
      2010-07-07
  • [Presentation] DEGENERATION OF OLFACTORY RECEPTOR GENE REPERTORIES IN PRIMATES : NO DIRECT LINK TO FULL TRICHROMATIC VISION0

    • Author(s)
      Atsushi Matsui
    • Organizer
      International Primatological Society XXIII Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      00000916
  • [Presentation] Comparative Transcriptome Analysisin Chimpanzee Trio0

    • Author(s)
      Yasuhiro Go
    • Organizer
      International Primatological Society XXIII Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      00000913
  • [Presentation] Region-specific distribution of non-taster Japanes emacaques0

    • Author(s)
      Nami Suzuki
    • Organizer
      International Primatological Society XXIII Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      00000913
  • [Presentation] DIVERSIFICATION OF BITTER TASTE RECEPTOR GENE FAMILY IN CHIMPANZEES0

    • Author(s)
      Toru Sugawara
    • Organizer
      International Primatological Society XXIII Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      00000913
  • [Presentation] INTRASUBSPECIFIC POLYMORPHISMS AND INTERSUBSPECIFIC DIVERGENECE OF BITTER TASTE RECEPTOR GENES IN CHIMPANZEES0

    • Author(s)
      Takashi Hayakawa
    • Organizer
      International Primatological Society XXIII Congress
    • Place of Presentation
      Kyoto
    • Year and Date
      00000913
  • [Presentation] Comparative transcriptome and genome analysis in a chimpanzee trio0

    • Author(s)
      Yasuhiro Go
    • Organizer
      Young Researchers Conferenceon Evolutionary Genomics
    • Place of Presentation
      Tokyo
    • Year and Date
      00000802
  • [Presentation] Molecular Evolution of the Bitter Taste Receptor Gene Familyin Three Chimpanzee Subspecies0

    • Author(s)
      Takashi Hayakawa
    • Organizer
      Young Researchers Conferenceon Evolutionary Genomics
    • Place of Presentation
      Tokyo
    • Year and Date
      00000802
  • [Book] Post Genome Biology of Primates2012

    • Author(s)
      Hirohisa Hirai, Hiroo Imai, Yasuhiro Go
    • Publisher
      Primatology Monographs
  • [Book] 受容体遺伝子の進化「化学受容の科学」2012

    • Author(s)
      郷康広
    • Total Pages
      71-82
    • Publisher
      化学同人
  • [Remarks]

    • URL

      http://www.pri.kyoto-u.ac.jp/bunshi/idenshi/index.html

URL: 

Published: 2013-07-31  

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