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2010 Fiscal Year Final Research Report

Construction of stabilized PNA/DNA invasion complex for the analysis of higher-order structure of DNA

Research Project

  • PDF
Project/Area Number 22850004
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Chemistry related to living body
Research InstitutionThe University of Tokyo

Principal Investigator

AIBA Yuichiro  The University of Tokyo, 先端科学技術研究センター, 特任助教 (10581085)

Project Period (FY) 2010
Keywords核酸 / バイオテクノロジー / 遺伝子 / ゲノム / PNA
Research Abstract

Peptide Nucleic Acid (PNA) is a one of DNA analogues and it can form stable duplex with its complementary DNA. Furthermore, PNA can "invade" a double-stranded DNA sequence-selectively (formation of invasion complex) and this special recognition mode of double-stranded DNA is called "strand invasion". In this study, we developed a strategy to stabilize the invasion complex for the analysis of higher-order structure of DNA.

  • Research Products

    (13 results)

All 2011 2010 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (10 results) Remarks (1 results)

  • [Journal Article] Manipulation of Single-Stranded DNA Using Artificial Site-Selective DNA Cutter Composed of Ce(IV)/EDTA and Phosphonate- Oligonucleotide Conjugates2011

    • Author(s)
      Y.Aiba, T.Lonnberg, M.Komiyama
    • Journal Title

      Chemistry-An Asian Journal (accepted.)

    • Peer Reviewed
  • [Journal Article] Artificial DNA Cutters for DNA Manipulation and Genome Engineering2011

    • Author(s)
      Y.Aiba, J.Sumaoka, M.Komiyama
    • Journal Title

      Chemical Society Reviews 10

      Pages: 1039/C1CS15039A

    • Peer Reviewed
  • [Presentation] PNA-peptide conjugateによる2重鎖DNA位置選択的切断への応用2011

    • Author(s)
      愛場雄一郎・濱野悠也・亀島渡・Accetta Alessandro・Sforza Stefano・Marchelli Rosangela・Corradini Roberto・小宮山眞
    • Organizer
      第60回高分子討論会
    • Place of Presentation
      岡山大学(発表予定)
    • Year and Date
      20110900
  • [Presentation] 細胞内応用を志向した人工DNAカッター(ARCUT)の開発2011

    • Author(s)
      愛場雄一郎・濱野悠也・本田祐太・亀島渡・菊池宏海・鴫成美・須磨岡淳・小宮山眞
    • Organizer
      第21回バイオ・高分子シンポジウム
    • Place of Presentation
      関西大学(口頭発表予定)
    • Year and Date
      20110700
  • [Presentation] Ce(IV)/EDTAとペプチド核酸・ペプチドコンジュゲートによる位置選択的DNA切断2011

    • Author(s)
      愛場雄一郎・濱野悠也・Accetta Alessandro・Sforza Stefano・Marchelli Rosangela・Corradini Roberto・小宮山眞
    • Organizer
      第28回希土類討論会
    • Place of Presentation
      タワーホール船堀(口頭発表)
    • Year and Date
      2011-05-12
  • [Presentation] PNA-Peptide conjugateを利用したDNA位置選択的切断2011

    • Author(s)
      愛場雄一郎・濱野悠也・Accetta Alessandro・Sforza Stefano・Marchelli Rosangela・Corradini Roberto・小宮山眞
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(口頭発表)
    • Year and Date
      2011-03-29
  • [Presentation] Strict recognition of double- stranded DNA by chemically modified PNA (Peptide Nucleic Acid).2010

    • Author(s)
      Y.Aiba・M.Komiyama
    • Organizer
      2010 International Chemical Congress of Pacific Basin Societies
    • Place of Presentation
      Honolulu, Hawaii, USA(ポスター発表)
    • Year and Date
      2010-12-17
  • [Presentation] Site-selective scission of double- stranded DNA by Ce(IV)/EDTA and only one mixed-base PNA.2010

    • Author(s)
      Y.Aiba・Y.Hamano・A.Accetta・S.Sforza・R.Marchelli・R.Corradini・M.Komiyama
    • Organizer
      2010 International Chemical Congress of Pacific Basin Societies
    • Place of Presentation
      Honolulu, Hawaii, USA(ポスター発表)
    • Year and Date
      2010-12-16
  • [Presentation] Incorporation of a flexible linker into pseudo-complementary PNA for the strict recognition of DNA.2010

    • Author(s)
      Y.Aiba・Y.Nishiyama・M.Komiyama
    • Organizer
      The 37th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Yokohama, Japan(ポスター発表)
    • Year and Date
      2010-11-10
  • [Presentation] 単一のPNA-peptide コンジュゲートを利用した位置選択的DNA切断2010

    • Author(s)
      愛場雄一郎・濱野悠也・Accetta Alessandro・Sforza Stefano・Marchelli Rosangela・Corradini Roberto・小宮山眞
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪大学(ポスター発表)
    • Year and Date
      2010-09-26
  • [Presentation] 単一のPNA-peptideコンジュゲートを利用した位置選択的DNA 切断2010

    • Author(s)
      愛場雄一郎・濱野悠也・Accetta Alessandro・Sforza Stefano・Marchelli Rosangela・Corradini Roberto・小宮山眞
    • Organizer
      第25回生体機能関連化学シンポジウム「若手フォーラム」
    • Place of Presentation
      大阪大学(ポスター発表)
    • Year and Date
      2010-09-23
  • [Presentation] 機能性リンカー導入による新規PNA修飾法の開発2010

    • Author(s)
      愛場雄一郎・小宮山眞
    • Organizer
      第22回生体機能関連化学部会若手の会サマースクール
    • Place of Presentation
      三重県(ポスター発表)
    • Year and Date
      2010-07-16
  • [Remarks] ホームページ等

    • URL

      http://www.mkomi.rcast.u-tokyo.ac.jp/member/aiba.html

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Published: 2012-01-26   Modified: 2016-04-21  

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