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2011 Fiscal Year Final Research Report

Analysis of Cellular Factors Regulating HIV-1 Infection in Small Animals

Research Project

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Project/Area Number 22890144
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Virology
Research InstitutionKumamoto University

Principal Investigator

IKEDA Terumasa  熊本大学, 大学院・生命科学研究部, 学術研究員 (00588410)

Project Period (FY) 2010 – 2011
KeywordsAPOBEC1 / HIV-1 / 脱アミノ化 / leucine-rich motif / dimerization
Research Abstract

APOBEC1(A1) is the catalytic component of a complex that mediates C-to-U deamination of mRNA for apolipoprotein B(apoB), and is involved in lipid transport in gastrointestinal tissues. However, various mammalian A1s are also potent DNA C-to-U deaminases, suggesting possible innate immune functions. We previously reported that A1s from rodents(mouse, rat and hamster) and lagomorphs(rabbit) are capable of inhibiting the infectivity of HIV-1. A rank order in anti-HIV-1 potency was seen with rabbit A1 showing greatest activity. In contrast, human A1 did not show any anti-HIV-1 activity. To determine the region responsible for rabbit A1 anti-HIV-1 activity, we constructed 14 chimeras of human and rabbit A1 using overlapping PCR and tested them against HIV-1 using single-round infectivity assays. Results showed that the C-terminal region containing a leucine-rich motif and two putative dimerization domains is important for anti-HIV-1 activity. A1 chimeras showing anti-HIV-1 activity tended to be incorporated into HIV-1 virions more efficiently and these chimeras induced higher G-to-A and C-to-T mutations in the viral DNA and RNA. Taken together, these findings suggest that the C-terminal region containing a leucine-rich motif and dimerization domains are involved in both packaging into the HIV-1 virion and deamination activity. These findings may be applicable to understanding the roles of the broader APOBEC family in virus restriction.

  • Research Products

    (17 results)

All 2012 2011 2010

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (14 results)

  • [Journal Article] APOBEC cytidine deaminases and retroviral restriction2012

    • Author(s)
      Koito A, and Ikeda T.
    • Journal Title

      Wiley Interdisciplinary Reviews(WIREs) RNA

      Volume: (In press)

    • Peer Reviewed
  • [Journal Article] Intrinsic restriction activity by AID/APOBEC family of enzymes against the mobility of retroelements2011

    • Author(s)
      Koito A, and Ikeda T.
    • Journal Title

      Mobile Genetic Elements

      Volume: 1 Pages: 197-202

    • Peer Reviewed
  • [Journal Article] Intrinsic restriction activity by apolipoprotein B mRNA editing enzyme APOBEC1 against the mobility of autonomous retrotransposons2011

    • Author(s)
      Ikeda T, Abd El Galil KH, Tokunaga K, Maeda K, Sata T, Sakaguchi N, Heidmann T, and Koito A.
    • Journal Title

      Nucleic Acids Res

      Volume: 39 Pages: 5538-54

    • Peer Reviewed
  • [Presentation] Intrinsic restriction activity by APOBEC enzymes against HIV and retroelement2012

    • Author(s)
      Koito A, and Ikeda T.
    • Organizer
      4^<th> International Conference on Drug Discovery & Therapy(ICDDT) 2012
    • Place of Presentation
      United Arab Emirate, Dubai, UAE.
    • Year and Date
      2012-12-15
  • [Presentation] キメラタンパク質を用いたAPOBEC1の抗HIV-1活性に関する責任部位の機能解析2011

    • Author(s)
      池田輝政、小糸厚
    • Organizer
      第25回日本エイズ学会学術集会総会
    • Place of Presentation
      ハイアットリージェンシー東京,東京
    • Year and Date
      20111130-1202
  • [Presentation] Intrinsic restriction activity by apoB mRNA editing enzyme APOBEC1 against the mobility of retroelements. Frontiers of Retrovirology Conference2011

    • Author(s)
      Koito A and Ikeda T.
    • Organizer
      Movenpick Hotel Amsterdam City Centre
    • Place of Presentation
      Amsterdam, Netherlands
    • Year and Date
      20111003-05
  • [Presentation] Identification of the functional region required for anti-HIV-1 activity of APOBEC12011

    • Author(s)
      Ikeda T and Koito A.
    • Organizer
      International Union of Microbiological Societies 2011 Congress, international Congress of Virology
    • Place of Presentation
      Sapporo Convention Center, Sapporo, Japan
    • Year and Date
      20110911-16
  • [Presentation] Intrinsic restriction activity by APOBEC cytidine deaminases against the mobility of retroelements2011

    • Author(s)
      Koito A and Ikeda T.
    • Organizer
      BIT's 1^<st> Annual World Congress of Molecular & Cell Biology(CMCB) 2011
    • Place of Presentation
      Beijing International Convention Center(BICC), Beijing, China
    • Year and Date
      20110806-08
  • [Presentation] APOBEC1の抗HIV-1活性に関する責任部位の機能解析2011

    • Author(s)
      池田輝政、小糸厚
    • Organizer
      日本レトロウイルス研究会2011年度夏季セミナー(SRC2011)
    • Place of Presentation
      大木山,河口湖,山梨県
    • Year and Date
      20110728-30
  • [Presentation] Identification of the functional region required for anti-HIV-1 activity of APOBEC12011

    • Author(s)
      Ikeda T and Koito A.
    • Organizer
      Cold Spring Harbor Laboratory Meeting, Retroviruses
    • Place of Presentation
      Cold Spring Harbor Loboratory, New York, USA
    • Year and Date
      20110523-28
  • [Presentation] Intrinsic Restriction Activity by APOBEC1 against the Mobility of Autonomous Retrotransposons. Keystone Symposia2011

    • Author(s)
      Ikeda T, Abd El Galil KH, Tokunaga K, Maeda K, Sata T, Sakaguchi N, Heidmann T, and Koito A.
    • Organizer
      Whistler Conference Centre, Whistler
    • Place of Presentation
      Canada
    • Year and Date
      20110320-25
  • [Presentation] APOBEC1キメラタンパク質の抗HIV-1活性における解析2010

    • Author(s)
      池田輝政、小糸厚
    • Organizer
      第24回日本エイズ学会学術集会
    • Place of Presentation
      グランドプリンスホテル高輪,ザ・プリンスさくらタワー東京,東京
    • Year and Date
      20101124-26
  • [Presentation] 哺乳類APOBEC1による内在性レトロエレメント制御機構の解析2010

    • Author(s)
      池田輝政、Abd El Galil Khaled Hussein、徳永研三、前田和彦、佐多徹太郎、阪口薫雄、Heidman Thierry、小糸厚
    • Organizer
      第58回日本ウイルス学会学術集会
    • Place of Presentation
      徳島県郷土文化会館,徳島
    • Year and Date
      20101107-09
  • [Presentation] Identification of the functional region required for anti-HIV-1 activity of APOBEC12010

    • Author(s)
      Ikeda T, and Koito A.
    • Organizer
      11^<th> Kumamoto AIDS seminar GCOE joint international symposium
    • Place of Presentation
      Aso Resort GRANDVRIOHOTEL, Kumamoto, Japan
    • Year and Date
      20101006-08
  • [Presentation] ApoB mRNA editing enzyme APOBEC1-mediated intrinsic restriction activity against HIV-1 and retrotransposons in small species2010

    • Author(s)
      Koito A, Abd El Galil Khaled Hussein, and Ikeda T.
    • Organizer
      11^<th> Kumamoto AIDS seminar GCOE joint international symposium
    • Place of Presentation
      Aso Resort GRANDVRIOHOTEL, Kumamoto, Japan
    • Year and Date
      20101006-08
  • [Presentation] 哺乳類APOBEC1による内在性レトロエレメント制御機構の解析2010

    • Author(s)
      池田輝政
    • Organizer
      日本レトロウイルス研究会2010年度夏季セミナー(SRC2010)
    • Place of Presentation
      犬山温泉犬山館,愛知県
    • Year and Date
      20100831-0902
  • [Presentation] Intrinsic Restriction Activity by APOBEC1 against the Mobility of Autonomous Retrotransposons2010

    • Author(s)
      Ikeda T, Abd El Galil KH, Tokunaga K, Maeda K, Sata T, Sakaguchi N, Heidmann T, and Koito A.
    • Organizer
      Cold Spring Harbor Laboratory Meeting, Retroviruses
    • Place of Presentation
      Cold Spring Harbor Laboratory, New York, USA
    • Year and Date
      20100524-29

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Published: 2013-07-31  

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