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2023 Fiscal Year Research-status Report

Label-free volumetric microscopy for visualizing intracellular motility of tumor cell culture

Research Project

Project/Area Number 22KF0058
Allocation TypeMulti-year Fund
Research InstitutionUniversity of Tsukuba

Principal Investigator

安野 嘉晃  筑波大学, 医学医療系, 教授 (10344871)

Co-Investigator(Kenkyū-buntansha) HOSSEIN IBRAHIM  筑波大学, 医学医療系, 外国人特別研究員
Project Period (FY) 2023-03-08 – 2025-03-31
KeywordsDynamic OCT / Intra-tissue activity / Tumor spheroid imaging / Drug testing / Label-free oncology / Ex-vivo tissue functions
Outline of Annual Research Achievements

In FY 2023, our proposed OCT microscope was successfully used for anti-cancer drug response evaluation of the tumor spheroid. The results of two major drug response studies were published as journal papers. The first includes the evaluation of the drug-response patterns of human breast and human colon cancer spheroids, while the second paper involves drug-type dependent response pattern evaluation of human breast cancer spheroid.
Development of an integrated microscope of dynamic OCT and cell cultivation chamber has been conducted in FY2023. It allowed longitudinal time-lapse imaging over 100 hours of single tumor spheroid and successfully revealed the fine temporal and spatial responses of human breast cancer spheroids to different anti-cancer drugs. The results of this research have been presented at an international conference (Photonics West, BiOS 2024).
A close collaboration research with the members in the host laboratory was conducted. It includes evaluating the renal tubular function and morphology of mouse kidneys, developing a new dynamic OCT algorithm for quantitative assessment of intracellular activities, developing an in-vivo dynamic OCT method using hardware and software motion suppression methods, neural network-based high-speed dynamic OCT imaging and tissue density estimation. In addition, an investigation of the dynamic OCT signal properties and its relation to intracellular activities was conducted. The results of these researches were published either as co-authoring journal papers or presented at international and domestic conferences.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

So far, we believe that the project progress goes smoothly. This was confirmed by the research achievements as follows. Two journal papers demonstrating the success of the proposed OCT microscope for the anti-cancer drug response assessment of tumor spheroid were first authored by the JSPS fellow and published in FY2023. The results were also presented in several international and domestic conferences presentations.
In FY2023, the JSPS fellow also successfully developed an integrated microscopic system of OCT microscope and cultivation chamber for longitudinal tumor spheroid drug response assessment. The time-lapse drug response imaging of tumor spheroid was performed over 100 hours. The results were promising and further brings the proposed OCT microscope to practical use as a tool for tumor spheroid based anti-cancer. The results and presented in an international conference and are going to be published as a journal paper in FY2024.
In addition, several ongoing researches, including developing several functional extensions of the proposed OCT microscope, are done collaboratively with the host laboratory members. The JSPS fellow is actively involved in these researches and was included as a coauthor for several papers and conference presentations.

Strategy for Future Research Activity

In FY2024, I’m going to proceed with the development of the integrated dynamic OCT microscope and cell cultivation chamber. Several experiments and studies are going to be conducted to demonstrate the utility of this integrated system for longitudinal time-lapse evaluation of the tumor spheroid drug response. The results of this study will be published as a journal paper.
More quantitative evaluation of the tissue activity, including quantification of the tumor spheroid tissue activity alteration under anti-cancer drug administration, will be conducted using our newly proposed dynamic OCT algorithm.
We will proceed with the development of in-vivo dynamic OCT technique using a hybrid hardware and software motion suppression method and integrate it with our OCT microscope.
Tissue microstructure evaluation via polarization analysis will be integrated into our OCT microscope. An optic axis orientation algorithm, which is newly developed in the host laboratory is going to be adapted to the proposed OCT microscope. It will allow the assessment of fibrous structures and extracellular matrix abnormalities.
The above-mentioned developments will increase the tissue specificity of our proposed OCT microscope. Using the proposed microscope, we are going to perform several pre-clinical studies including longitudinal drug type- and drug concertation-dependent tumor spheroid response pattern evaluation, ex-vivo tissue biopsies investigation, and in-vivo drug response evaluation of small animal (mouse and zebrafish) tumor models will be investigated.

Causes of Carryover

In the next fiscal year, I’m planning to proceed with the study of the longitudinal time-lapse evaluation of the tumor spheroid drug response using our developed integrated system of dynamic OCT microscope and cell cultivation chamber. The experiments are going to be held in FY2024 and they require the purchase of some gadget. In addition, I will publish this study as a journal paper, which requires publication fees. So, I carried over an amount of 264,038 JPY to cover the costs of the experiments and journal publication fees.
Additionally, we plan to do several pre-clinical studies as explained in our future plan. Performing these experiments will require the purchase of several gadgets including chemicals, drugs, data storage, and so on. So, we carried over the amount of 264,038 JPY to cover a part of these purchases.

  • Research Products

    (23 results)

All 2024 2023

All Journal Article (5 results) (of which Int'l Joint Research: 5 results,  Peer Reviewed: 5 results,  Open Access: 5 results) Presentation (18 results) (of which Int'l Joint Research: 11 results)

  • [Journal Article] Label-free visualization and quantification of the drug-type-dependent response of tumor spheroids by dynamic optical coherence tomography2024

    • Author(s)
      Abd El-Sadek Ibrahim、Morishita Rion、Mori Tomoko、Makita Shuichi、Mukherjee Pradipta、Matsusaka Satoshi、Yasuno Yoshiaki
    • Journal Title

      Scientific Reports

      Volume: 14 Pages: -

    • DOI

      10.1038/s41598-024-53171-4

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Label-free drug response evaluation of human derived tumor spheroids using three-dimensional dynamic optical coherence tomography2023

    • Author(s)
      Abd El-Sadek Ibrahim、Shen Larina Tzu-Wei、Mori Tomoko、Makita Shuichi、Mukherjee Pradipta、Lichtenegger Antonia、Matsusaka Satoshi、Yasuno Yoshiaki
    • Journal Title

      Scientific Reports

      Volume: 13 Pages: -

    • DOI

      10.1038/s41598-023-41846-3

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Label-free intratissue activity imaging of alveolar organoids with dynamic optical coherence tomography2023

    • Author(s)
      Morishita Rion、Suzuki Toshio、Mukherjee Pradipta、Abd El-Sadek Ibrahim、Lim Yiheng、Lichtenegger Antonia、Makita Shuichi、Tomita Kiriko、Yamamoto Yuki、Nagamoto Tetsuharu、Yasuno Yoshiaki
    • Journal Title

      Biomedical Optics Express

      Volume: 14 Pages: 2333~2333

    • DOI

      10.1364/BOE.488097

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Theoretical model for en face optical coherence tomography imaging and its application to volumetric differential contrast imaging2023

    • Author(s)
      Tomita Kiriko、Makita Shuichi、Fukutake Naoki、Morishita Rion、Abd El-Sadek Ibrahim、Mukherjee Pradipta、Lichtenegger Antonia、Tamaoki Junya、Bian Lixuan、Kobayashi Makoto、Mori Tomoko、Matsusaka Satoshi、Yasuno Yoshiaki
    • Journal Title

      Biomedical Optics Express

      Volume: 14 Pages: 3100~3100

    • DOI

      10.1364/BOE.491510

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Renal tubular function and morphology revealed in kidney without labeling using three-dimensional dynamic optical coherence tomography2023

    • Author(s)
      Mukherjee Pradipta、Fukuda Shinichi、Lukmanto Donny、Tran Thi Hang、Okada Kosuke、Makita Shuichi、El-Sadek Ibrahim Abd、Lim Yiheng、Yasuno Yoshiaki
    • Journal Title

      Scientific Reports

      Volume: 13 Pages: -

    • DOI

      10.1038/s41598-023-42559-3

    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Longitudinal drug response imaging of tumor spheroids using dynamic optical coherence tomography in conjunction with cell cultivation2024

    • Author(s)
      Ibrahim G. Abd El-Sadek, Rion Morishita, Masato Iwatsuki, Atsuko Furukawa, Shuichi Makita, Pradipta Mukherjee, Satoshi Matsusaka, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Dynamics and Fluctuations in Biomedical Photonics XXI
    • Int'l Joint Research
  • [Presentation] Longitudinal drug response imaging of tumor spheroids using dynamic optical coherence tomography in conjunction with cell cultivation2024

    • Author(s)
      Pradipta Mukherjee, Shinichi Fukuda, Donny Lukmanto, Kosuke Okada, Thi Hang Tran, Ibrahim Abd El-Sadek, Shuichi Makita, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Dynamics and Fluctuations in Biomedical Photonics XXI
    • Int'l Joint Research
  • [Presentation] Wavelength and resolution dependency of dynamic optical coherence tomography2024

    • Author(s)
      Shumpei Fujimura, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Yiheng Lim, Lida Zhu, Rion Morishita, Yuanke Feng, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Label-free Biomedical Imaging and Sensing (LBIS) 2024
    • Int'l Joint Research
  • [Presentation] In-vivo dynamic and multi-contrast imaging of human skin by motion-suppressed dynamic optical coherence tomography2024

    • Author(s)
      Yu Guo, Rion Morishita, Ibrahim G. Abd El-Sadek, Pradipta Mukherjee, Yiqiang Zhu, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Photonics in Dermatology and Plastic Surgery 2024
    • Int'l Joint Research
  • [Presentation] Deep-learning-based high-speed volumetric dynamic optical coherence tomography2024

    • Author(s)
      Yusong Liu, Ibrahim Abd El-Sadek, Shuichi Makita, Tomoko Mori, Atsuko Furukawa, Satoshi Matsusaka, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVIII
    • Int'l Joint Research
  • [Presentation] Characterizing intracellular activities of dynamic optical coherence tomography: a mathematical modeling approach2024

    • Author(s)
      Yuanke Feng, Shumpei Fujimura, Yiheng Lim, Thitiya Seesan, Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Label-free Biomedical Imaging and Sensing (LBIS) 2024
    • Int'l Joint Research
  • [Presentation] In vivo dynamic optical coherence tomography with hardware- and software-based motion correction2024

    • Author(s)
      Yu Guo, Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Yiqiang Zhu, and Yoshiaki Yasuno
    • Organizer
      Photonics West, BiOS, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVIII
    • Int'l Joint Research
  • [Presentation] Quantitative dynamic optical coherence tomography by multi-time-window signal intensity variance2024

    • Author(s)
      Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Tanatchaya Seesan, Yiheng Lim, Tomoko Mori, Atsuko Furukawa, Satoshi Matsusaka, Shuichi Makita, and Yoshiaki Yasuno "Quantitative dynamic optical coherence tomography by multi-time-window signal intensity variance
    • Organizer
      Photonics West, BiOS, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXVIII
    • Int'l Joint Research
  • [Presentation] Human-derived tumor-spheroid-based anti-cancer drugs testing using dynamic optical coherence tomography2023

    • Author(s)
      Ibrahim Abd El-Sadek, Rion Morishita, Tomoko Mori, Shuichi Makita, Pradipta Mukherjee, Satoshi Matsusaka, and Yoshiaki Yasuno
    • Organizer
      European Conferences on Biomedical Optics, Optical Coherence Imaging Techniques and Imaging in Scattering Media
    • Int'l Joint Research
  • [Presentation] Label-free intra-tissue activity imaging of alveolar organoid with three-dimensional dynamic optical coherence tomography2023

    • Author(s)
      Rion Morishita, Pradipta Mukherjee, Ibrahim Abd El-Sadek, Toshio Suzuki, Antonia Lichtenegger, YiHeng Lim, Yiqiang Zhu, Shuichi Makita, Yuki Yamamoto, Tetsuharu Nagamoto, and Yoshiaki Yasuno
    • Organizer
      European Conferences on Biomedical Optics, Optical Coherence Imaging Techniques and Imaging in Scattering Media
    • Int'l Joint Research
  • [Presentation] New formulation of OCT for analytical signal-to-speckle separation and volumetric differential contrast imaging2023

    • Author(s)
      Kiriko Tomita, Shuichi Makita, Naoki Fukutake, Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Antonia Lichtenegger, and Yoshiaki Yasuno
    • Organizer
      European Conferences on Biomedical Optics, Optical Coherence Imaging Techniques and Imaging in Scattering Media
    • Int'l Joint Research
  • [Presentation] Longitudinal imaging of tumor spheroid response to anti-cancer drugs by dynamic optical coherence tomography integrated with cultivation chamber2023

    • Author(s)
      Ibrahim Abd El-Sadek,Rion Morishita,Masato Iwatsuki,Atsuko Furukawa,Shuichi Makita,Pradipta Mukherjee, Satoshi Matsusaka,Yoshiaki Yasuno
    • Organizer
      Optics and Photonics Japan
  • [Presentation] Investigating the wavelength and resolution dependency in dynamic optical coherence tomography signals2023

    • Author(s)
      Shumpei Fujimura,Ibrahim Abd El-Sadek, Pradipta Mukherjee,Yiheng Lim,Lida Zhu,Rion Morishita,Yuanke Feng,Yoshiaki Yasuno
    • Organizer
      Optics and Photonics Japan
  • [Presentation] Modeling intracellular dynamics and its relation to dynamic optical coherence tomography signals2023

    • Author(s)
      Feng Yuanke,Shumpei Fujimura,Yiheng Lim,Thitiya Seesan,Rion Morishita,Ibrahim Abd El-Sadek,Pradipta Mukherjee,Yoshiaki Yasuno
    • Organizer
      Optics and Photonics Japan
  • [Presentation] Quantitative intra-tissue activity imaging technique for evaluating in vitro cell culture samples by optical coherence tomography2023

    • Author(s)
      Rion Morishita, Toshio Suzuki, Pradipta Mukherjee, Ibrahim Abd El-Sadek, Tanatchaya Seesan, Yiheng Lim, Shuichi Makita, Yuki Yamamoto, Tetsuharu Nagamoto, Yoshiaki Yasuno
    • Organizer
      The Japan Society of Applied Physics (JSAP) autumn meeting
  • [Presentation] Deep learning based high-speed three-dimensional dynamic optical coherence tomography generation for tumor spheroid evaluation2023

    • Author(s)
      Yusong Liu, Ibrahim Abd El-Sadek, Shuichi Makita, Tomoko Mori, Atsuko Furukawa, Satoshi Matsusaka, Yoshiaki Yasuno
    • Organizer
      The Japan Society of Applied Physics (JSAP) autumn meeting
  • [Presentation] Assessing the effect of metabolic inhibitor drugs on liver functionality with dynamic optical coherence tomography2023

    • Author(s)
      Pradipta Mukherjee, Donny Lukmanto, Shinichi Fukuda, Toshiharu Yamashita, Kosuke Okada, Thi Hang Tran, Ibrahim Abd El-Sadek, Shuichi Makita, Yoshiaki Yasuno
    • Organizer
      The Japan Society of Applied Physics (JSAP) autumn meeting
  • [Presentation] In vivo dynamic optical coherence tomography with hardware- and software-based motion correction methods2023

    • Author(s)
      YU GUO, Rion Morishita, Ibrahim Abd El-Sadek, Pradipta Mukherjee, Yiqiang Zhu, Yoshiaki Yasuno
    • Organizer
      The Japan Society of Applied Physics (JSAP) autumn meeting

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Published: 2024-12-25  

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