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2013 Fiscal Year Final Research Report

Molecular basis for the maintenance of envelope integrity in Selenomonas ruminantium: Controlled mechanism of cadaverine biosynthesis which covalently links to the peptidoglycan

Research Project

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Project/Area Number 23380046
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionShokei Gakuin College (2013)
Tohoku University (2012)
Yamagata University (2011)

Principal Investigator

KAMIO Yoshiyuki  尚絅学院大学, 総合人間科学部, 名誉教授 (00109175)

Co-Investigator(Kenkyū-buntansha) TANAKA Isao  北海道大学, 大学院・先端科学研究科, 特任教授 (70093052)
KANEKO Jun  東北大学, 大学院・農学研究科, 准教授 (30221188)
Co-Investigator(Renkei-kenkyūsha) TAKATSUKA Yumiko  山形大学, 大学院・理工学研究科, 助教 (70570810)
Project Period (FY) 2011-04-01 – 2014-03-31
Keywordsバクテリアアンチザイム / リボソーム蛋白質L-10 / L10遺伝子 / ポリアミン生合成制御機構 / ペプチドグリカン結合型ポリアミン / ClpXP protease
Research Abstract

Selenomonas ruminantium has cadaverine(Cad),which links covalently to the peptidoglycan (PG) for the cell devision.In this bacterium,Cad is synthesized constitutively from L-lysine by lysine/ornithine decarboxylase (LDC/ODC) and transferred to PG. Here,we found that (1) LDC/ODC was degraded at an early stationary phase by ATP dependent ClpXP.This degradation requires a ribosomal protein L10 which is induced into cytoplasm by putrescine in the cells. The induced L10 has similar biochemical and biophysical characteristics to those of an antizyme (AZ),which have been reported only in mammalian cells.(2) PG-bound Cad mediates an interaction between PG and the periplasm-exposed S-layer homologous domain of Mep45, a major outer membrane (OM) protein of this bacterium, thereby forms the structural linkage between the PG and OM.(3)The gene of lipid intermediate:diamine transferase (Ldt) for cadaverine-adding reaction into the lipid intermediate was cloned and the gene product was purified.

  • Research Products

    (18 results)

All 2013 2012 2011 Other

All Journal Article (9 results) Presentation (8 results) (of which Invited: 4 results) Book (1 results)

  • [Journal Article] Preliminary X-ray crystallographic study of staphylococcal α-haemolysin monomer2013

    • Author(s)
      T . Sugawara, D. Y amashita, Y . T anaka, J. Kaneko, Y . Kamio, I. T anaka & M.Y ao
    • Journal Title

      Acta Cryst

      Volume: F69 Pages: 868-870

  • [Journal Article] Molecular basis for the maintenance of envelope integrity in Selenomona s r umina ntium : Cadaverine biosynthesis and covalent modification into the peptidoglycan play a major role2013

    • Author(s)
      S. Kojima & Y . Kamio
    • Journal Title

      J . Nutr. Sci. Vitaminol

      Volume: 58 Pages: 153-160

  • [Journal Article] AxyR, an AraC family transcriptional activator of the xylanase 3 gene requires xyloolygosaccharides as a cofactor for DNA binding in Pa eniba cillus strain W-612012

    • Author(s)
      M. Fukuda, S. Y oshida, H. Itoh, S. Watanabe, Y . Itoh, Y . Kamio, & J. Kaneko
    • Journal Title

      Biosci. Biotechnol. Biochem

      Volume: 78 Pages: 1051-1054

  • [Journal Article] 偏性嫌気性細菌Selenomonas ruminantium の表層膜安定機構 -細胞壁結合型カダベリンの分子機能およびその合成・制御系-2012

    • Author(s)
      児島征司, 神尾好是
    • Journal Title

      ビタミン

      Volume: 86 Pages: 1-12

  • [Journal Article] Cadaverine covalently linked to the peptidoglycan serves as the correct constituent for the anchoring mechanism between the outer membrane and peptideglycan in Selenomona s r uminantium2011

    • Author(s)
      S. Kojima, J. Kaneko, N. Abe, Y . Takatsuka & Y . Kamio
    • Journal Title

      J . Bacteriol

      Volume: 193 Pages: 2347-2350

  • [Journal Article] 2-Methyl-2, 4-pentanediol induces spontaneous assembly of staphylococcal α-hemolysin into heptameric pore structure2011

    • Author(s)
      Y. Tanaka, N. Hirano, J. Kaneko, Y. Kamio, M. Yao, & I. Tanaka
    • Journal Title

      Protein Science

      Volume: 20 Pages: 448-456

  • [Journal Article] Cluster-forming property correlated with hemolytic activity by staphylococcal γ-hemolysin transmembrane pores2011

    • Author(s)
      N. Tomita, K. Abe, Y . Kamio & M. Ohta
    • Journal Title

      FEBS Letter

      Volume: 585 Pages: 2452-2456

  • [Journal Article] Crystal structure of the octameric pore of staphylococcal γ-hemolysin reveals the β-barrel pore formation mechanism by two components2011

    • Author(s)
      K. Yamashita, Y . Kawai, Y . Tanaka, M. Hirano, J. Kaneko, N. Tomita, M. Ohta, Y . Kamio, M. Yao & I. T anaka
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 108 Pages: 17314-17319

  • [Journal Article] Probabilistic study on subunit mismatch arrangement in staphylococcal γ-hemolysin heteroheptameric trans-membrane pore2011

    • Author(s)
      N. T omita, K. Abe, J. Kaneko, Y . Kamio & M. Ohta
    • Journal Title

      J . Biomecha nical Science and Engineering

      Volume: 6 Pages: 286-298

  • [Presentation] 細菌細胞壁結合ポリアミンの膜安定化機構と合成制御2013

    • Author(s)
      神尾好是
    • Organizer
      日本農芸化学会大会シンポジウム
    • Place of Presentation
      仙台
    • Year and Date
      2013-03-28
    • Invited
  • [Presentation] ルーメン細菌 Selenomona s r umina ntium subsp. lactilytica T AM6421 株のゲノム解析2013

    • Author(s)
      小野寺智子, 神尾好是, 金子淳
    • Organizer
      日本農芸化学会大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-03-25
  • [Presentation] Molecular basis for the maintenance of cell envelope integrity in Selenomona s r umina ntium which possesses cadaverine as an essential constituent of the peptidoglycan and regulation of the biosynthesis of cadaverine2013

    • Author(s)
      Y . Kamio
    • Organizer
      第4回ポリアミン学会大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-01-24
    • Invited
  • [Presentation] Degradation of a Selenomona srumina ntium lysine/ornithine decarboxylase by ClpX/P proteolysis system which requires bacterial antizyme2012

    • Author(s)
      Y . Kamio
    • Organizer
      Japan-Finland Biotechnology Symposium
    • Place of Presentation
      Sendai
    • Year and Date
      2012-06-04
    • Invited
  • [Presentation] Bacterial two component, and hetero-oligomeric cytolytic toxin : Structure, pore forming mechanism, and organization of the genes2011

    • Author(s)
      Y . Kamio
    • Organizer
      8th Inter na tiona l conf erence of Fluid Science of Flow dy namics
    • Place of Presentation
      Hotel Metropolitan Sendai, Sendai
    • Year and Date
      2011-11-09
    • Invited
  • [Presentation] Degradation of a Selenomonas ruminantium lysine/ornithine decarboxylase by ClpXP proteolysis system which requires bacterial antizyme, P222011

    • Author(s)
      H. Numako, Y. Takatsuka, S.Yamada-Narita, J. Kaneko, N. Fujita & Y. Kamio
    • Organizer
      International Union of Microbiological Society 2011 Congress
    • Place of Presentation
      Sapporo
    • Year and Date
      2011-09-14
  • [Presentation] Selenomonas ruminantium におけるペプチドグリカン(PG) 結合型カダベリンを介した外膜-PG 間接着機構の解析2011

    • Author(s)
      児島征司, 高塚由美子, 阿部直, 金子淳, 神尾好是
    • Organizer
      日本農芸化学会全国大会
    • Place of Presentation
      京都
    • Year and Date
      2011-03-27
  • [Presentation] Selenomonas ruminantium におけるペプチドグリカン(PG) 結合型カダベリンを介した外膜-PG 間安定化機構の解析2011

    • Author(s)
      児島征司, 高塚由美, 阿部直, 金子淳, 神尾好是
    • Organizer
      日本ポリアミン学会 第2回年会
    • Place of Presentation
      宇都宮
    • Year and Date
      2011-01-28
  • [Book] Bacterial antizyme in "Poly a mines : A univer sal molecular nexus for gr owth, survival and specialized meta bolism", edited by T. Kusano and H. Suzuki

    • Author(s)
      Y . Kamio, Y . Y amaguchi & J. Kaneko
    • Publisher
      Springer, Tokyo(印刷中)

URL: 

Published: 2015-06-25  

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