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2013 Fiscal Year Final Research Report

Elucidation of the true picture of the hemoglobin allosteric equilibrium

Research Project

  • PDF
Project/Area Number 23570197
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Biophysics
Research InstitutionJichi Medical University

Principal Investigator

SHIBAYAMA Naoya  自治医科大学, 医学部, 教授 (20196439)

Co-Investigator(Renkei-kenkyūsha) PARK Sam-yong  横浜市立大学, 大学院医科学研究科, 教授 (20291932)
Project Period (FY) 2011 – 2013
Keywordsヘモグロビン / アロステリー / X線結晶構造解析 / 酸素平衡曲線 / 2状態モデル
Research Abstract

The molecular mechanisms of protein allostery have been attributed to the two-state transition between T (tense) and R (relaxed) states, based largely on the knowledge about hemoglobin (Hb). However, an equilibrium ensemble for solution Hb cannot be adequately described by just these two states. Here we report an unprecedented crystal form in which Hb is free to adopt any allosteric structure, depending on the conditions, and at the same time allows oxygen binding to be monitored directly in the crystal. We identify nine conformations including a new intermediate between T and R. Our findings give a comprehensive picture of the equilibrium conformers and transition pathway for Hb.

  • Research Products

    (7 results)

All 2014 2013 2012 2011 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (3 results) Remarks (1 results)

  • [Journal Article] Capturing the Hemoglobin Allosteric Transition in a Single Crystal Form2014

    • Author(s)
      Naoya Shibayama, Kanako Sugiyama, Jeremy R. H. Tame, and Sam-Yong Park.
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 136 (13) Pages: 5097–5105

    • DOI

      10.1021/ja500380e

    • Peer Reviewed
  • [Journal Article] Symmetry Distortion in the Human Hemoglobin Tetramer Induced by Asymmetric Ligation2012

    • Author(s)
      Naoya Shibayama.
    • Journal Title

      FEBS Letters

      Volume: 586(1) Pages: 74–78

    • DOI

      10.1016/j.febslet.2011.11.027

    • Peer Reviewed
  • [Journal Article] Structures and Oxygen Affinities of Crystalline Human Hemoglobin C (β6 Glu→Lys) in the R and R2 Quaternary Structures2011

    • Author(s)
      Naoya Shibayama, Kanako Sugiyama, and Sam-Yong Park.
    • Journal Title

      J. Biol. Chem.

      Volume: 286(38) Pages: 33661-33668

    • DOI

      10.1074/jbc.M111.266056

    • Peer Reviewed
  • [Presentation] 単一結晶形中でのヘモグロビンのアロステリック転移2013

    • Author(s)
      柴山修哉
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2013-10-29
  • [Presentation] ヘモグロビンのアロステリック平衡のリアルな描像2012

    • Author(s)
      柴山修哉, 朴三用
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋大学・東山キャンパス
    • Year and Date
      2012-09-24
  • [Presentation] 2種類のリラックス状態ヘモグロビン結晶の機能比較2011

    • Author(s)
      柴山修哉
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学・姫路書写キャンパス
    • Year and Date
      2011-09-16
  • [Remarks]

    • URL

      http://www.jichi.ac.jp/news/research/2013/20140327.html

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Published: 2015-07-16  

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