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2013 Fiscal Year Final Research Report

Arsenic release from paddy soil by a dissimilatory arsenate-reducing bacterium Geobacter sp. OR-1

Research Project

  • PDF
Project/Area Number 23580103
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionChiba University

Principal Investigator

AMACHI Seigo  千葉大学, 園芸学研究科, 准教授 (80323393)

Co-Investigator(Renkei-kenkyūsha) YAMAGUCHI Noriko  (独)農業環境技術研究所, 土壌環境研究領域, 主任研究員 (80345090)
Project Period (FY) 2011 – 2013
Keywords環境微生物 / ヒ素 / 水田土壌 / 溶出 / Geobacter / ヒ酸還元 / ArrA / XANES
Research Abstract

Previously, we have succeeded to isolate a novel arsenate-reducing bacterium Geobacter sp. OR-1 from Japanese paddy soil. In this study, we isolated a new arsenate-reducing bacterium Anaeromyxobacter sp. PSR-1 from arsenic-polluted soil. When these bacterial strains were inoculated into sterile paddy soil, arsenic release was reproduced. XANES analysis revealed that these strains were able to reduce arsenate adsorbed on soil solid phase. In addition, the strains could release arsenic adsorbed on ferrihydrite. We also determined draft genome sequences of these strains. Preliminary draft genome analysis of strain OR-1 identified two arsenic islands containing multiple arsA and arsD genes, and possible dissimilatory arsenate-reductase genes (arrAB) were also found.

  • Research Products

    (15 results)

All 2014 2013 2012 2011 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (9 results) Book (1 results)

  • [Journal Article] Arsenic release from soil by a novel arsenate-reducing bacterium Anaeromyxobacter sp2013

    • Author(s)
      K. Kudo, N. Yamaguchi, T. Makino, T. Ohtsuka, K. Kimura. D. T. Dong and S. Amachi
    • Journal Title

      PSR-1, Appl. Environ. Microbiol

      Volume: 79 Pages: 4635-4642

    • Peer Reviewed
  • [Journal Article] Arsenic dissolution from Japanese paddy soil by a dissimilatory arsenate-reducing bacterium Geobacter sp2013

    • Author(s)
      T. Ohtsuka, N. Yamaguchi, T. Makino, K. Sakurai, K. Kimura, K. Kudo, E. Homma, D.T. Dong and S. Amachi
    • Journal Title

      OR-1, Environ. Sci. Technol

      Volume: 47 Pages: 6263-6271

    • Peer Reviewed
  • [Journal Article] Arsenic release from flooded paddy soils is influenced by speciation, Eh, pH, and iron dissolution2011

    • Author(s)
      N. Yamaguchi, T. Nakamura, D. Dong, Y. Takahashi, S. Amachi and T. Makino
    • Journal Title

      Chemosphere

      Volume: 83 Pages: 925-932

    • Peer Reviewed
  • [Journal Article] Effect of soil microorganisms on arsenite oxidation in paddy soils under oxic conditions

    • Author(s)
      D. T. Dong, N. Yamaguchi, T. Makino and S. Amachi
    • Journal Title

      Soil Sci. Plant Nutr

      Volume: (in press)

    • Peer Reviewed
  • [Journal Article] Microbiology of inorganic arsenic : From metabolism to bioremediation

    • Author(s)
      S. Yamamura and S. Amachi
    • Journal Title

      J. Biosci. Bioeng

      Volume: (in press)

    • DOI

      10.1016/j.jbiosc.2013.12.011

    • Peer Reviewed
  • [Presentation] 異化的ヒ酸還元細菌Geobacter sp. OR-1株のドラフトゲノム解析2013

    • Author(s)
      江原彩香、天知誠吾
    • Organizer
      第29回日本微生物生態学会大会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2013-11-23
  • [Presentation] Arsenic dissolution from Japanese paddy soil by a dissimilatory arsenate-reducing bacterium Geobacter sp2013

    • Author(s)
      S. Amachi, D. T. Dong, and N. Yamaguchi
    • Organizer
      OR-1, Goldschmidt 2013
    • Place of Presentation
      Florence, Italy
    • Year and Date
      2013-08-25
  • [Presentation] 新規ヒ酸還元細菌の分離:ヒ素の還元溶出へ与えるインパクト2013

    • Author(s)
      天知誠吾
    • Organizer
      第1回Metal(loid) Biogeochemistry勉強会
    • Place of Presentation
      千葉大学
    • Year and Date
      2013-06-14
  • [Presentation] 異化的ヒ酸還元能を有するAnaeromyxobacter sp. PSR-1株の性質2012

    • Author(s)
      工藤桂太郎、天知誠吾
    • Organizer
      第18回ヒ素シンポジウム
    • Place of Presentation
      宮日ホール
    • Year and Date
      2012-11-24
  • [Presentation] ヒ酸還元能を有する鉄還元細菌Geobacter sp. OR-1株の生理的特質2012

    • Author(s)
      本間瑛理、天知誠吾
    • Organizer
      第18回ヒ素シンポジウム
    • Place of Presentation
      宮日ホール
    • Year and Date
      2012-11-24
  • [Presentation] ヒ素呼吸能を持つ新規Geobacter属細菌による水田土壌からのヒ素の溶出2012

    • Author(s)
      天知誠吾
    • Organizer
      第28回日本微生物生態学会大会
    • Place of Presentation
      豊橋技術科学大学
    • Year and Date
      2012-09-19
  • [Presentation] 国内水田土壌からのヒ素の溶出に及ぼす微生物の影響2011

    • Author(s)
      天知誠吾、中村崇志、大塚俊彦、櫻井和宏、木村建太、工藤桂太郎、牧野知之、山口紀子
    • Organizer
      第17回ヒ素シンポジウム
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2011-11-19
  • [Presentation] 国内水田土壌からの異化的ヒ酸還元細菌の分離2011

    • Author(s)
      工藤桂太郎、天知誠吾、本間瑛理
    • Organizer
      第27回日本微生物生態学会大会
    • Place of Presentation
      京都大学
    • Year and Date
      2011-10-08
  • [Presentation] Microbial influences on arsenic release from Japanese paddy soils2011

    • Author(s)
      S. Amachi, S. Nakamura, T. Ohtsuka, K. Kimura, K. Sakurai, K. Kudo, T. Makino and N. Yamaguchi
    • Organizer
      IUMS2011 Sapporo
    • Place of Presentation
      Sapporo
    • Year and Date
      2011-09-06
  • [Book] 地球を救うメタルバイオロジー微生物と金属資源のはなし2014

    • Author(s)
      山村茂樹、天知誠吾
    • Total Pages
      105-113
    • Publisher
      成山堂書店

URL: 

Published: 2015-07-16  

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