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2013 Fiscal Year Final Research Report

The analysis of the de-silencing mechanism in E. coli

Research Project

  • PDF
Project/Area Number 23580114
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionNara Institute of Science and Technology

Principal Investigator

OSHIMA Taku  奈良先端科学技術大学院大学, バイオサイエンス研究科, 助教 (50346318)

Project Period (FY) 2011 – 2013
Keywords微生物遺伝・育種 / 転写制御 / 核様体 / 大腸菌 / サイレンシング
Research Abstract

The transcriptome analysis with the deletion mutants of hha, ydgT, stpA and hns genes indicated that Hha and YdgT are the proteins which assist H-NS to repress the expression over 100 genes. In addition, lux and lacZ reporter analysis to elucidate the mechanisms of the transcriptional regulations in ybdO and ler promoters indicated that the wide areas in up and downstream of the ybdO promoter is essential for the transcriptional repression of ybdO which depends on H-NS and the derepression of ler promoter with Pch protein observed when the repression of ler genes was cooperatively regulated by H-NS and Hha.

  • Research Products

    (5 results)

All 2014 2013 2012

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (4 results)

  • [Journal Article] Functions of the Hha and YdgT Proteins in Transcriptional Silencing by the Nucleoid Proteins, H-NS and StpA, in Escherichia coli2013

    • Author(s)
      Takeshi Ueda, Hiroki Takahashi, Ebru Uyar, Ishikawa S, Ogasawara N, Oshima T.
    • Journal Title

      DNA Res

      Volume: 20 Pages: 263-271

    • Peer Reviewed
  • [Presentation] 細菌における外来遺伝子発現抑制機構2014

    • Author(s)
      大島拓
    • Organizer
      日本農芸化学会,シンポジウム「微生物ゲノム設計の時代に塩基組成の機能と進化を再考する」
    • Place of Presentation
      川崎
    • Year and Date
      2014-03-30
  • [Presentation] ゲノムワイドな解析手法により明らかになった核様体タンパク質の機能2013

    • Author(s)
      大島拓
    • Organizer
      日本遺伝学会第85回大会
    • Place of Presentation
      横浜
    • Year and Date
      2013-09-19
  • [Presentation] 大腸菌Hha, YdgTタンパク質による外来性遺伝子の転写抑制2013

    • Author(s)
      上田剛士,高橋弘喜,石川周,小笠原直毅、大島拓
    • Organizer
      第7回日本ゲノム微生物学会年会
    • Place of Presentation
      長浜
    • Year and Date
      2013-03-08
  • [Presentation] Comparative analysis of H-NS binding profiles suggests a role of H-NS in sequence diversification of bacterial genome2012

    • Author(s)
      大島拓
    • Place of Presentation
      ライデンオランダ
    • Year and Date
      2012-06-20

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Published: 2015-07-16  

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