• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

2012 Fiscal Year Final Research Report

Challenges for the structure determination of GPCR active conformation

Research Project

  • PDF
Project/Area Number 23657074
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionKyoto University

Principal Investigator

SHIMAMURA Tatsuro  京都大学, 大学院・医学研究科, 特定講師 (90391979)

Co-Investigator(Renkei-kenkyūsha) OGASAWARA Satoshi  京都大学, 医学研究科, 研究員 (30546685)
ASADA Hidetsugu  京都大学, 医学研究科, 研究員 (20399041)
Project Period (FY) 2011 – 2012
KeywordsX線結晶解析 / 受容体 / GPCR / 膜タンパク質
Research Abstract

In order to understand the GPCR-mediated signal transduction mechanisms, it is essential to determine the GPCR structures in the active and inactive conformations. We published the structure of Histamine H1 receptor in complex with an inverse agonist doxepin. The structure revealed the reason why doxepin shows high affinities to aminergic receptors. We also published the structure of Adenosine A2a receptor in the inactive conformation. For crystallization, the receptor was stabilized in the inactive conformation by the binding of Fab fragment. The antibody that stabilizes the receptor in the active conformation was successfully obtained. This antibody will be useful for the determination of the Adenosine A2a receptor structure in the active conformation.

  • Research Products

    (22 results)

All 2012 2011 Other

All Journal Article (9 results) (of which Peer Reviewed: 7 results) Presentation (11 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Structural biology and molecular targets2012

    • Author(s)
      Shimamura T, Iwata S.
    • Journal Title

      Nihon Rinsho

      Volume: Nov;70 Suppl 8 Pages: 316-20

  • [Journal Article] Structure of histamine H1 receptor2012

    • Author(s)
      Shimamura T
    • Journal Title

      Seikagaku.

      Volume: 84(9) Pages: 772-6

  • [Journal Article] Conformational transition of the lid helix covering the proteaseactive site is essential for the ATP-dependent protease activity of FtsH.2012

    • Author(s)
      Suno R, Shimoyama M, Abe A, Shimamura T, Shimodate N, Watanabe YH, Akiyama Y, Yoshida M.
    • Journal Title

      FEBS Lett

      Volume: 586(19) Pages: 3117-21

    • Peer Reviewed
  • [Journal Article] Platform for the rapidconstruction and evaluation of GPCRs forcrystallography in Saccharomycescerevisiae.2012

    • Author(s)
      Shiroishi M, Tsujimoto H, Makyio H, Asada H, Yurugi-Kobayashi T, Shimamura T, Murata T, Nomura N, Haga T, Iwata S, Kobayashi T.
    • Journal Title

      Microb Cell Fact.

      Volume: 11 Pages: 78

    • DOI

      doi:10.1186/1475-2859-11-78.

    • Peer Reviewed
  • [Journal Article] G-protein-coupled receptor inactivation by anallosteric inverse-agonist antibody.2012

    • Author(s)
      Hino T, Arakawa T, Iwanari H, Yurugi-Kobayashi T, Ikeda-Suno C, Nakada-Nakura Y, Kusano-Arai O, Weyand S, Shimamura T, Nomura N, Cameron AD, Kobayashi T,Hamakubo T, Iwata S, Murata T.
    • Journal Title

      Nature.

      Volume: 482(7384) Pages: 237-40

    • DOI

      doi:10.1038/nature10750.

    • Peer Reviewed
  • [Journal Article] Crystal structure-based virtual screening for fragment-like ligands of the human histamine H(1) receptor.2011

    • Author(s)
      de Graaf C, Kooistra AJ, Vischer HF, Katritch V, Kuijer M, Shiroishi M, Iwata S, Shimamura T, Stevens RC, de Esch IJ, Leurs R.
    • Journal Title

      J Med Chem.

      Volume: 54(23) Pages: 8195-206

    • DOI

      doi:10.1021/jm2011589.

    • Peer Reviewed
  • [Journal Article] Production of the stable human histamine H_1 receptor in Pichiapastoris for structural determination.2011

    • Author(s)
      Shiroishi M, Kobayashi T, Ogasawara S, Tsujimoto H, Ikeda-Suno C, Iwata S,Shimamura T.
    • Journal Title

      Methods.

      Volume: 55(4) Pages: 281-6

    • DOI

      doi:10.1016/j.ymeth.2011.08.015.

    • Peer Reviewed
  • [Journal Article] Structure of the human histamine H1 receptor complex with doxepin.2011

    • Author(s)
      Shimamura T, Shiroishi M, Weyand S, Tsujimoto H, Winter G, Katritch V, AbagyanR, Cherezov V, Liu W, Han GW, Kobayashi T, Stevens RC, Iwata S.
    • Journal Title

      Nature

      Volume: 475 (7354) Pages: 65-70

    • DOI

      doi:10.1038/nature10236.

    • Peer Reviewed
  • [Journal Article] Cloning,expression and purification of the anion exchanger 1 homologue from thebasidiomycetePhanerochaete chrysosporium.2011

    • Author(s)
      Tokuda N, Igarashi K, Shimamura T, Yurugi-Kobayashi T, Shiroishi M, Ito K,Sugawara T, Asada H, Murata T, Nomura N, Iwata S, Kobayashi T.
    • Journal Title

      Protein Expr Purif.

      Volume: 79(1) Pages: 81-7

    • DOI

      doi:10.1016/j.pep.2011.04.006.

    • Peer Reviewed
  • [Presentation] ヒスタミンH1受容体の構造により解明された抗ヒスタミン薬選択性機構2012

    • Author(s)
      島村 達郎
    • Organizer
      第34回生体膜と薬物の相互作用シンポジウム
    • Place of Presentation
      京都
    • Year and Date
      2012-11-15
  • [Presentation] キュービックフェーズ法による膜タンパク質の結晶化2012

    • Author(s)
      島村 達郎
    • Organizer
      蛋白研セミナー
    • Place of Presentation
      大阪
    • Year and Date
      2012-09-21
  • [Presentation] 膜蛋白質の結晶化2012

    • Author(s)
      島村 達郎
    • Organizer
      第12回 日本蛋白質科学会
    • Place of Presentation
      名古屋
    • Year and Date
      2012-06-20
  • [Presentation] ヒト由来ヒスタミンH1受容体の立体構造2012

    • Author(s)
      島村 達郎
    • Organizer
      第9回 GPCR研究会
    • Place of Presentation
      東京
    • Year and Date
      2012-05-11
  • [Presentation] Structural studies of human G-protein coupled receptors2012

    • Author(s)
      Shimamura T.
    • Organizer
      日本農芸化学会2012 年度大会
    • Place of Presentation
      京都
    • Year and Date
      2012-03-25
  • [Presentation] 微結晶を用いた創薬ターゲット膜タンパク質の構造解析とSACLAの可能性2012

    • Author(s)
      島村 達郎
    • Organizer
      第25回日本放射光学会年会放射光科学合同シンポジウム
    • Place of Presentation
      鳥栖
    • Year and Date
      2012-01-09
  • [Presentation] ヒスタミンH1 受容体の立体構造から分かった抗ヒスタミン薬選択性の分子機構2011

    • Author(s)
      島村 達郎
    • Organizer
      第18回創薬情報研究会
    • Place of Presentation
      大阪
    • Year and Date
      2011-12-22
  • [Presentation] Structural basis of secondary active transport in the sodium-hydantoin transporter Mhp1.2011

    • Author(s)
      Shimamura T.
    • Organizer
      The JSPS/iCeMS International Symposium.
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2011-11-17
  • [Presentation] ヒト由来ヒスタミン受容体H1 の構造解析戦略2011

    • Author(s)
      島村 達郎
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都
    • Year and Date
      2011-09-24
  • [Presentation] ヒダントイン輸送体Mhp1の基質輸送中の動き2011

    • Author(s)
      島村 達郎, 岩田想
    • Organizer
      生理研研究会「作動中の膜機能分子の姿を捉える - 静止画から動画へ -」
    • Place of Presentation
      岡崎
    • Year and Date
      2011-09-08
  • [Presentation] Structure of the human histamine H1 receptor with doxepin.2011

    • Author(s)
      Shimamura T.
    • Organizer
      International Union of Crystallography, XXII Congress and General Assembly.
    • Place of Presentation
      Madrid, Spain.
    • Year and Date
      2011-08-29
  • [Remarks]

    • URL

      http://www.kyoto-u.ac.jp/ja/news_data/h/h1/news6/2010/100423_1.htm

  • [Patent(Industrial Property Rights)] アゴニストの親和性を亢進する抗ヒトアデノシンA2a受容体モノクローナル抗体2012

    • Inventor(s)
      小笠原諭 日野智也 島村達郎荒川孝俊 万木貴美 寿野千代 村田武士小林拓也 岩田想
    • Industrial Property Number
      特願2012-49812
    • Filing Date
      2012-03-06

URL: 

Published: 2014-09-25  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi