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2012 Fiscal Year Final Research Report

Structural analysis of the Rab and SNARE localization

Research Project

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Project/Area Number 23770107
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

ITO Sakurako  東京大学, 放射光連携研究機構, 特任助教 (60597152)

Project Period (FY) 2011 – 2012
KeywordsX線結晶構造解析
Research Abstract

In eukaryotic cells, Rab and SNARE regulate the fusion of membrane compartments. Rabs are inseted into membranes via the prenylated moieties which are post-translationally attached. A membrane protein called GDF is proposed to catalyze the membrane insertion of Rab. As GDF and VAMP2, one of the SNARE protein, is shown to interact with each other, we are trying to reveal the structural basis of GDF-SNARE cooperation. So far, we have succeeded in the crystallization of GDF, and now trying to improve thediffraction quality of crystals. Also, we are trying to prepare GDF-VAMP2 complex.

  • Research Products

    (3 results)

All 2012 2011

All Journal Article (3 results) (of which Peer Reviewed: 3 results)

  • [Journal Article] Get1 stabilizes an open dimer conformation of get3 ATPase by binding two distinct interfaces.2012

    • Author(s)
      Kubota K, Yamagata A, Sato Y, Goto-Ito S, Fukai S.
    • Journal Title

      J Mol Biol.

      Volume: 422(3) Pages: 366-75

    • DOI

      doi:10.1016/j.jmb.2012.05.045. Epub 2012Jun 7.

    • Peer Reviewed
  • [Journal Article] Molecular basis of Lys-63-linked polyubiquitination inhibition by the interaction between human deubiquitinating enzyme OTUB1 and ubiquitin-conjugating enzyme UBC13.2012

    • Author(s)
      Sato Y, Yamagata A, Goto-Ito S, Kubota K, Miyamoto R, Nakada S, Fukai S.
    • Journal Title

      J Biol Chem.

      Volume: 287(31) Pages: 25860-8

    • DOI

      doi:10.1074/jbc.M112.364752. Epub 2012Jun 7.

    • Peer Reviewed
  • [Journal Article] Differentiating analogous tRNA methyltransferases by fragments of the methyl donor.2011

    • Author(s)
      Lahoud G, Goto-Ito S, Yoshida K, Ito T, Yokoyama S
    • Journal Title

      Hou YM.RNA.

      Volume: 17(7) Pages: 1236-46

    • DOI

      doi:10.1261/rna.2706011. Epub 2011 May 20.

    • Peer Reviewed

URL: 

Published: 2014-09-25  

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