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2013 Fiscal Year Final Research Report

Screening of the direct target genes of Nodal signaling in the mouse epiblast

Research Project

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Project/Area Number 23770254
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Developmental biology
Research InstitutionKyushu University

Principal Investigator

OKI Shinya  九州大学, 医学(系)研究科(研究院), 助教 (90452713)

Project Period (FY) 2011 – 2012
Keywordsマウスエピブラスト / Nodal / 多能性
Research Abstract

We performed transcriptome analysis with mouse epiblasts, which were isolated from the E5.5 mouse embryos cultured for short time in the presence or absence of a chemical inhibitor specific to Nodal signaling. As the result, we identified a number of direct target genes whose expression level was altered by the inhibitor. In particular, genes upregulated by the inhibitor included those involved in neural fate decision. We further validated the transcriptome analyses with in situ hybridization method for genes involved in mouse early development. Therefore, we could list the direct target genes of Nodal signaling out of those already known to be altered in Nodal knock-out mice.

  • Research Products

    (9 results)

All 2013 2012 Other

All Journal Article (4 results) Presentation (3 results) Remarks (2 results)

  • [Journal Article] Wnt signaling regulates left-right axis formation in the node of mouse embryos2013

    • Author(s)
      Kitajima K, Oki S, Ohkawa Y, Sumi T, Meno C.
    • Journal Title

      Dev Biol.

      Volume: 15;380(2) Pages: 222-32

  • [Journal Article] Epiblast ground state is controlled by canonical Wnt/β-catenin signaling in the postimplantation mouse embryo and epiblast stem cells2013

    • Author(s)
      Sumi T, Oki S, Kitajima K, Meno C.
    • Journal Title

      PLoS One

      Volume: 14;8(5) Pages: e63378

  • [Journal Article] Fate maps of ventral and dorsal pancreatic progenitor cells in early somite stage mouse embryos2012

    • Author(s)
      Miki R, Yoshida T, Murata K, Oki S, Kume K, Kume S.
    • Journal Title

      Mech Dev.

      Volume: 128(11-12) Pages: 597-609

  • [Journal Article] Restriction of Wnt signaling in the dorsal otocyst determines semicircular canal formation in the mouse embryo2012

    • Author(s)
      Noda T, Oki S, Kitajima K, Harada T, Komune S, Meno C.
    • Journal Title

      Dev Biol.

      Volume: 1;362(1) Pages: 83-93

  • [Presentation] Development of a GUI software to visualize high through-put sequence read archives2013

    • Author(s)
      Shinya Oki, Kazumitsu Maehara, Yasuyuki Ohkawa, Chikara Meno
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場
    • Year and Date
      20131203-06
  • [Presentation] 既報の次世代シーケンサ解析データを可視化するための簡易ソフトウェア2013

    • Author(s)
      沖真弥
    • Organizer
      定量生物学の会第六回年会
    • Place of Presentation
      大阪大学吹田キャンパス銀杏会館
    • Year and Date
      20131122-24
  • [Presentation] Development of a Mac GUI Application to Visualize Published Raw ChIP-seq data2013

    • Author(s)
      Shinya Oki and Chikara Meno
    • Organizer
      The 61st NIBB Conference "Cellular Community in Mammalian Embryogenesis"
    • Place of Presentation
      岡崎コンファレンスセンター
    • Year and Date
      20130710-13
  • [Remarks]

    • URL

      http://www.dev.med.kyushu-u.ac.jp

  • [Remarks]

    • URL

      http://www.devbio.med.kyushu-u.ac.jp

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Published: 2015-06-25  

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