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2012 Fiscal Year Final Research Report

Cloning and Expression of Siderophore Biosynthetic Gene Clusters from Marine Metagenome

Research Project

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Project/Area Number 23790134
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Drug development chemistry
Research InstitutionHokkaido University

Principal Investigator

FUJITA Masaki  北海道大学, 創成研究機構, 特任助教 (30505251)

Project Period (FY) 2011 – 2012
Keywords天然物化学 / 生合成 / メタゲノム
Research Abstract

More than 50 siderophore producing clones were found from the marine metagenomic library. Among them, DNA sequences of the four clones were determined. By chemical and spectroscopic methods, vibrioferrin and bisucaberin were identified as active products from the obtained clones. Especially, isolation yield of vibrioferrin was 40 times higher than that of the original producer. The other clone had a biosynthetic gene cluster whose total size was about 25 kbp which is one of the largest one found by functional metagenomic screening. These results suggested the promising potential of the functional metagenomic technique for cloning of biosynthetic genes and heterologous production of active molecules.

  • Research Products

    (15 results)

All 2013 2012 2011 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (9 results) Book (1 results) Remarks (1 results)

  • [Journal Article] a Linear Hydroxamate Class Siderophore from the Marine Bacterium Tenacibaculum mesophilum2013

    • Author(s)
      Fujita, M. J.; Nakano, K.; Sakai, R.; Bisucaberin B
    • Journal Title

      Molecules

      Volume: 18,4 Pages: 3917-3926

    • DOI

      doi:10.3390/molecules18043917

    • Peer Reviewed
  • [Journal Article] Phylogenetically novel LuxI/LuxR-type Quorum Sensing Systems Isolated Using a Metagenomic Approach; Appl2012

    • Author(s)
      Nasuno, E.; Kimura, N.; Fujita, M. J.; Nakatsu C.; Kamagata, Y.; Hanada, S.
    • Journal Title

      Environ. Microbiol.

      Volume: 22 Pages: 8067-8074

    • DOI

      doi:10.1128/AEM.01442-12

    • Peer Reviewed
  • [Journal Article] Heterologous production of bisucaberin using a biosynthetic gene cluster cloned from adeep sea metagenome.2012

    • Author(s)
      Fujita, M. J.; Kimura, N.; Yokose, H.; Otsuka,M.
    • Journal Title

      Mol. BioSyst.

      Volume: 8 Pages: 482-485

    • DOI

      doi:10.1039/C1MB05431G

    • Peer Reviewed
  • [Journal Article] Cloning and heterologous expression of the vibrioferrin biosynthetic gene cluster from a marine metagenomic library.2011

    • Author(s)
      Fujita, M. J.; Kimura, N.; Sakai, A.; Ichikawa, Y. Hanyu, T.; Otsuka, M.
    • Journal Title

      Biosci. Biotechnol. Biochem.

      Volume: 75,12 Pages: 2283-2287

    • DOI

      doi:10.1271/bbb.110379

    • Peer Reviewed
  • [Presentation] 海洋細菌からの非環状ヒドロキサム酸型シデロフォアの単離と推定生合成遺伝子のクローニング2013

    • Author(s)
      藤田雅紀・酒井隆一
    • Organizer
      平成25年度日本水産学会春季大会
    • Place of Presentation
      東京海洋大学(東京)
    • Year and Date
      20130326-30
  • [Presentation] Functional metagenomic study on marine natural products chemistry2012

    • Author(s)
      Masaki Fujita
    • Organizer
      2012International Conference of Natural Products Biosynthesis (8th US-Japan Seminar on the Biosynthesis of Natural Products)
    • Place of Presentation
      淡路夢舞台(兵庫)
    • Year and Date
      20120617-22
  • [Presentation] 海洋メタゲノム由来シデロフォア生産クローンの解析2012

    • Author(s)
      藤野悠那・大塚雅巳・藤田雅紀
    • Organizer
      第132回日本薬学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      20120326-30
  • [Presentation] Heterologous Production of Siderophores by Metagenomic Approach2012

    • Author(s)
      Masaki Fujita, Masami Otsuka
    • Organizer
      Gordon Research Conference, Marine Natural Products
    • Place of Presentation
      Ventura Beach Marriott (California, USA)
    • Year and Date
      20120226-0302
  • [Presentation] メタゲノム法による難培養海洋環境微生物からの新規生合成マシナリーの探索と物質生産2012

    • Author(s)
      藤田雅紀
    • Organizer
      生合成マシナリー第4回公開シンポジウム
    • Place of Presentation
      東京大学(東京)
    • Year and Date
      2012-12-07
  • [Presentation] メタゲノム法を用いた海洋天然物の異宿主生産2012

    • Author(s)
      藤田雅紀
    • Organizer
      日本農芸化学会東北支部会第13回若手の会
    • Place of Presentation
      星と森のロマントピア(青森)
    • Year and Date
      2012-10-05
  • [Presentation] Heterologous Production of Siderophores by the Genes Cloned from a Marine Metagenome2011

    • Author(s)
      Masaki Fujita
    • Organizer
      2011US-Japan Bioorganic Marine Chemistry
    • Place of Presentation
      沖縄コンベンションセンター(沖縄)
    • Year and Date
      20111211-16
  • [Presentation] メタゲノム法による難培養海洋環境微生物からの新規生合成マシナリーの探索と物質生産2011

    • Author(s)
      藤田雅紀
    • Organizer
      生合成マシナリー第3回公開シンポジウム
    • Place of Presentation
      東京大学(東京)
    • Year and Date
      2011-12-03
  • [Presentation] メタゲノム法による難培養海洋環境微生物からの新規生合成マシナリーの探索と物質生産2011

    • Author(s)
      藤田雅紀
    • Organizer
      生合成マシナリー第2回公開シンポジウム
    • Place of Presentation
      東京大学(東京)
    • Year and Date
      2011-06-04
  • [Book] 生体有機化学2012

    • Author(s)
      藤田雅紀,他
    • Total Pages
      3-14
    • Publisher
      東京化学同人
  • [Remarks]

    • URL

      http://www.cris.hokudai.ac.jp/fujita/index.html/

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Published: 2014-09-25  

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