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2023 Fiscal Year Research-status Report

Establishment of innovative antimicrobial therapy by developing customizable bacteriophage

Research Project

Project/Area Number 23K13876
Research InstitutionNational Institute of Infectious Diseases

Principal Investigator

アザム アアハエルマン  国立感染症研究所, 治療薬・ワクチン開発研究センター, 研究員 (80852780)

Project Period (FY) 2023-04-01 – 2025-03-31
KeywordsPhage therapy / Bacteriophage / Antimicrobial resistance
Outline of Annual Research Achievements

At the beginning of this research, an assessment was conducted to compare the therapeutic efficacy of bacteriophages against that of antibiotics. The results demonstrated that the optimal therapeutic outcomes were achieved through a combination of bacteriophages and antibiotics, underscoring the significance of carefully selecting the appropriate bacteriophages for use (Azam et al., Microbiology Spectrum, 2024). Subsequently, a synthetic approach was developed and implemented, leading to the successful generation of various synthetic bacteriophages for various purposes including for detection (Tamura et al. Communication Biology. 2024) or phage with enhanced therapeutic activity through this methodology (Azam et al. BioRxive 2024).

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

The progress of the research project has been notably positive, with several significant milestones having been achieved. Among these accomplishments, two peer-reviewed publications have been produced. In one of these publications, I have been credited as the first author, demonstrating primary responsibility and substantial involvement in the study. In the other publication, I have been acknowledged as the second author, reflecting a significant, role in the research efforts. These achievements underscore the productive and impactful nature of the ongoing research activities.

Strategy for Future Research Activity

In the current study, we identified that the synthetic method for bacteriophage production is limited to phages with genomes up to 60 kilobases. This limitation necessitates protocol optimization, as many phages with broad host ranges typically possess genomes exceeding 100 kilobases. Additionally, we discovered that many clinically significant bacteria harbor anti-phage defense systems, potentially compromising the efficacy of phage therapy. However, it was also found that certain phages contain anti-defense mechanisms, referred to as anti-defense canceller, which can counteract these bacterial defenses (Azam et al., BioRxiv, 2024). We aim to further evaluate this anti-defense strategy in the ongoing study.

Causes of Carryover

We propose to allocate the remaining funds towards the procurement of essential materials, specifically oligonucleotide DNA and synthetic DNA. These materials are crucial for conducting advanced molecular work and comprehensive biochemical analyses. The acquisition of oligonucleotide DNA will facilitate precise genetic manipulations and sequence verification, while synthetic DNA is necessary for constructing and engineering specific genetic constructs required for our experimental protocols. These resources are indispensable for the successful continuation and completion of our research objectives.

  • Research Products

    (3 results)

All 2024 2023

All Journal Article (3 results)

  • [Journal Article] Selective bacteriophages reduce the emergence of resistant bacteria in bacteriophage-antibiotic combination therapy2024

    • Author(s)
      Azam Aa Haeruman、Sato Koji、Miyanaga Kazuhiko、Nakamura Tomohiro、Ojima Shinjiro、Kondo Kohei、Tamura Azumi、Yamashita Wakana、Tanji Yasunori、Kiga Kotaro
    • Journal Title

      Microbiology Spectrum

      Volume: 2024 Pages: 1-14

    • DOI

      10.1128/spectrum.00427-23

  • [Journal Article] Synthetic phage-based approach for sensitive and specific detection of Escherichia coli O1572024

    • Author(s)
      Tamura Azumi、Azam Aa Haeruman、Nakamura Tomohiro、Lee Kenichi、Iyoda Sunao、Kondo Kohei、Ojima Shinjiro、Chihara Kotaro、Yamashita Wakana、Cui Longzhu、Akeda Yukihiro、Watashi Koichi、Takahashi Yoshimasa、Yotsuyanagi Hiroshi、Kiga Kotaro
    • Journal Title

      Communications Biology

      Volume: 2024 Pages: 1-13

    • DOI

      10.1038/s42003-024-06247-w

  • [Journal Article] Viruses encode tRNA and anti-retron to evade bacterial immunity2023

    • Author(s)
      Azam Aa Haeruman、Chihara Kotaro、Kondo Kohei、Nakamura Tomohiro、Ojima Shinjiro、Tamura Azumi、Yamashita Wakana、Cui Longzhu、Takahashi Yoshimasa、Watashi Koichi、Kiga Kotaro
    • Journal Title

      BioRxive

      Volume: 2024 Pages: 1-12

    • DOI

      10.1101/2023.03.15.532788

URL: 

Published: 2024-12-25  

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