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2013 Fiscal Year Final Research Report

Development of artificial peptidase domains

Research Project

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Project/Area Number 24655146
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Chemistry related to living body
Research InstitutionThe University of Tokyo

Principal Investigator

GOTO Yuki  東京大学, 理学(系)研究科(研究院), 助教 (70570604)

Project Period (FY) 2012-04-01 – 2014-03-31
Keywordsペプチド / 人工酵素 / 試験管内分子進化
Research Abstract

Although artificial proteases with novel substrate specificities and unique catalytic properties would have potential utility in useful analytical methods and new therapeutic approaches, de novo creation of artificial protease domain has never achieved. This program aims at development of artificial small peptidase domains, which catalyzes self-cleavage of an amide bond.
By using the translation initiation reprogramming method, a short (20-40 aa length) random peptide library with a 1013 diversity was prepared. In vitro selection experiments of active species from the resulting peptide library has provided 22 novel peptide sequences that could exhibit the desired self-cleavage activity.

  • Research Products

    (13 results)

All 2014 2013 2012

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (7 results) (of which Invited: 2 results) Book (2 results)

  • [Journal Article] Selection-based discovery of druglike macrocyclic peptides2014

    • Author(s)
      Passioura, T.; Katoh, T.; Goto, Y.; Suga, H.
    • Journal Title

      Annu. Rev. Biochem.

      Volume: (in press)

    • DOI

      10.1146/annurev-biochem-060713-035456

    • Peer Reviewed
  • [Journal Article] Nonstandard peptide expression under the genetic code consisting of reprogrammed dual sense codons2013

    • Author(s)
      Goto, Y.; Iseki, M.; Hitomi, A.; Murakami, H.; Suga, H.
    • Journal Title

      ACS Chem. Biol.

      Volume: 8 Pages: 2630-2634

    • DOI

      10.1021/cb400549p

    • Peer Reviewed
  • [Journal Article] Reevaluation of the D-amino acid compatibility with the elongation event in translation2013

    • Author(s)
      Fujino, T.; Goto, Y.; Suga, H; Murakami, H.
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Pages: 1830-1837

    • DOI

      10.1021/ja309570x

    • Peer Reviewed
  • [Journal Article] Flexizymes as a tRNA acylation tool facilitating genetic code reprogramming2012

    • Author(s)
      Goto, Y.; Suga, H.
    • Journal Title

      Methods Mol. Biol.

      Volume: 848 Pages: 465-478

    • DOI

      10.1007/978-1-61779-545-9_29

    • Peer Reviewed
  • [Presentation] 改変翻訳反応を用いた特殊環状ペプチドの合成2014

    • Author(s)
      後藤佑樹、山岸祐介、加藤敬行、菅裕明
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋(特別講演)
    • Year and Date
      20140327-30
  • [Presentation] 人工環状ペプチドは核内増殖抗原PCNAを細胞内で阻害する2014

    • Author(s)
      村上直央、後藤佑樹、加藤敬行、Kun Yang、William Bozza、Zhihao Zhuang、菅裕明
    • Organizer
      第16回生命化学研究会
    • Place of Presentation
      熱海
    • Year and Date
      20140109-10
  • [Presentation] 人工生合成系による特殊ペプチドの合成2013

    • Author(s)
      後藤佑樹
    • Organizer
      第45回若手ペプチド夏の勉強会
    • Place of Presentation
      八王子
    • Year and Date
      20130728-30
    • Invited
  • [Presentation] N-アルキルアミノ酸含有大環状擬天然ペプチドライブラリーからのHECT型E3ユビキチン転移酵素Smurf2阻害剤の探索2012

    • Author(s)
      山口淳、山岸祐介、後藤佑樹、加藤敬行、菅裕明
    • Organizer
      第35回日本分子生物学会
    • Place of Presentation
      福岡
    • Year and Date
      20121211-14
  • [Presentation] 酸化的カップリング反応により環状化したペプチドのin vitroセレクション2012

    • Author(s)
      村上直央、後藤佑樹、山岸祐介、加藤敬行、William Bozza、Kun Yang、Zhihao Zhuang、菅裕明
    • Organizer
      第49回ペプチド討論会
    • Place of Presentation
      鹿児島
    • Year and Date
      20121107-09
  • [Presentation] In vitro selection of macrocyclic peptides against human aminoacyl-tRNA synthetase complex interacting protein-12012

    • Author(s)
      Xiao Song、Kibom Kim、Sunghoon Kim、加藤敬行、後藤佑樹、菅裕明
    • Organizer
      第49回ペプチド討論会
    • Place of Presentation
      鹿児島
    • Year and Date
      20121107-09
  • [Presentation] 翻訳合成系を用いた新規生理活性ペプチドの探索2012

    • Author(s)
      後藤佑樹、菅裕明
    • Organizer
      BIA Symposium2012
    • Place of Presentation
      東京
    • Year and Date
      2012-07-20
    • Invited
  • [Book] 最新ペプチド合成技術とその創薬研究への応用(第3章4節)2012

    • Author(s)
      伊藤悠美、後藤佑樹、菅裕明
    • Total Pages
      125-130
    • Publisher
      メディカルドゥ
  • [Book] 生命システム工学(第5章)2012

    • Author(s)
      加藤敬行、後藤佑樹、菅裕明
    • Total Pages
      71-100
    • Publisher
      化学同人

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Published: 2015-06-25  

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