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2013 Fiscal Year Final Research Report

Formation mechanism of proteasome granules

Research Project

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Project/Area Number 24657097
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Functional biochemistry
Research InstitutionTokyo Metropolitan Institute of Medical Science

Principal Investigator

SAEKI Yasushi  公益財団法人東京都医学総合研究所, 生体分子先端研究分野, 副参事研究員 (80462779)

Project Period (FY) 2012-04-01 – 2014-03-31
Keywords細胞内タンパク質分解 / ユビキチン / プロテアソーム / 酵母
Research Abstract

The proteasome is an ATP-dependent protease complex responsible for targeted protein degradation in eukaryotic cells. To identify factors that affect the proteasome dynamics, we screened a yeast mutant library and found that the proteasome formed a large cytoplasmic granule in almost all the mitochondrial mutants. We found that lowered cellular ATP levels induce the granule formation of the proteasome even in the wild-type cells. Importantly, the granule formation of the proteasome is conserved in yeast and humans. Furthermore, the purified proteasomes formed fibrous aggregated structures by ATP depletion. Taken together, these results suggest that the proteasome itself senses cellular ATP levels and autonomously forms reversible granule structure in responding to cellular environments.

  • Research Products

    (24 results)

All 2014 2013 2012 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (12 results) Book (3 results) Remarks (1 results)

  • [Journal Article] Structural basis of proteasome formation controlled by an assembly chaperone Nas22014

    • Author(s)
      Satoh, T., Saeki, Y., Hiromoto, T., Wang, Y., Uekusa, Y., Yagi, H., Yoshihara, H., Yagi-Utsumi, M., Mizushima, T., Tanaka, K. and Kato, K.
    • Journal Title

      Structure

      Volume: 22 Pages: 731-743

    • DOI

      10.1016/j.str.2014.02.014

    • Peer Reviewed
  • [Journal Article] Quantitative live-cell imaging reveals spatio-temporal dynamics and cytoplasmic assembly of the 26S proteasome2014

    • Author(s)
      Pack, CG., Yukii, H., Toh-e, A., Kudo, T., Tsuchiya, H., Kaiho, A., Sakata, E., Murata, S., Sako, Y., Baumeister, W., Tanaka, K., and Saeki, Y.
    • Journal Title

      Nature Commun.

      Volume: 5 Pages: 3396

    • DOI

      10.1038/ncomms4396

    • Peer Reviewed
  • [Journal Article] Cytoplasmic proteasomes are not indispensable for cell growth in Saccharomyces cerevisiae2013

    • Author(s)
      Tsuchiya, H., Arai, N., Tanaka, K., and Saeki, Y.
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 436 Pages: 372-376

    • DOI

      10.1016/j.bbrc.2013.05.080

    • Peer Reviewed
  • [Journal Article] Structural basis for specific recognition of Rpt1p, an ATPase subunit of 26 S proteasome, by proteasome-dedicated chaperone Hsm3p2012

    • Author(s)
      Takagi, K., Kim, S., Yukii, H., Ueno, M., Morishita, R., Endo, Y., Kato, K., Tanaka, K., Saeki, Y., and Mizushima, T.
    • Journal Title

      J. Biol. Chem.

      Volume: 287 Pages: 12172-12182

    • DOI

      10.1074/jbc.M112.345876

    • Peer Reviewed
  • [Journal Article] Proteasomal degradation resolves competition between cell polarization and cellular wound healing2012

    • Author(s)
      Kono, K., Saeki, Y., Yoshida, S., Tanaka, K., and Pellman, D.
    • Journal Title

      Cell

      Volume: 150 Pages: 151-164

    • Peer Reviewed
  • [Journal Article] Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy2012

    • Author(s)
      Sakata, E., Bohn, S., Mihalache, O., Kiss, P., Beck, B., Nagy, I., Nickell, S., Tanaka, K., Saeki, Y., Förster, F., and Baumeister, W.
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 109 Pages: 1479-1484

    • DOI

      10.1073/pnas.1119394109

    • Peer Reviewed
  • [Journal Article] The proteasome : molecular machinery and pathophysiological roles2012

    • Author(s)
      Tanaka, K., Mizushima, T., and Saeki, Y.
    • Journal Title

      Biol Chem

      Volume: 393 Pages: 217-234

    • Peer Reviewed
  • [Journal Article] Assembly and function of the proteasome2012

    • Author(s)
      Saeki, Y and Tanaka, K
    • Journal Title

      Methods Mol Biol

      Volume: 832 Pages: 315-337

    • Peer Reviewed
  • [Presentation] 細胞内タンパク質分解装置プロテアソーム研究の最前線2014

    • Author(s)
      佐伯泰
    • Organizer
      金沢大学バイオAFM先端研究センターセミナー
    • Place of Presentation
      金沢
    • Year and Date
      2014-01-08
  • [Presentation] Quantitative Live-Cell Imaging Reveals Spatio- Temporal Dynamics and Cytoplasmic Assembly of the 26S Proteasome2013

    • Author(s)
      Yasushi Saeki, Chan-Gi Pack,1 Haruka Yukii, and Keiji Tanaka
    • Organizer
      EMBO Conference on Ubiquitin and ubiquitin-like proteins"From structure to function"
    • Place of Presentation
      Italy
    • Year and Date
      20131001-05
  • [Presentation] The formation mechanism of the proteasome granules2013

    • Author(s)
      Yasushi Saeki, Haruka Yukii, Naoko Arai, Ai Kaiho, and Keiji Tanaka
    • Organizer
      The 35^<th> Natio Conference"The Ubiquitin-Proteasome System : From Basic Mechanisms to Pathophysiological Roles"
    • Place of Presentation
      Sapporo
    • Year and Date
      20130709-12
  • [Presentation] プロテアソームは細胞内ATPレベルの低下を感知して顆粒を形成する2013

    • Author(s)
      佐伯泰,雪井悠,田中啓二
    • Organizer
      第65回日本細胞生物学会大会シンポジウム「細胞の中の生々流転—「もの」の動態に基づく機能制御」
    • Place of Presentation
      名古屋
    • Year and Date
      20130619-21
  • [Presentation] ユビキチンコード解析法とプロテアソーム研究の最前線2013

    • Author(s)
      佐伯泰
    • Organizer
      東京工業大学フロンティア研究機構セミナー
    • Place of Presentation
      横浜
    • Year and Date
      2013-08-30
  • [Presentation] プロテアソームダイナミクス2013

    • Author(s)
      佐伯泰
    • Organizer
      理化学研究所シンポジウム「プロテアソームダイナミクスの理解を目指して」
    • Place of Presentation
      東京
    • Year and Date
      2013-01-17
  • [Presentation] Structure and dynamics of the 26S proteasome2012

    • Author(s)
      Yasushi Saeki
    • Organizer
      熊本大学発生医学研究所リエゾンラボ研究会
    • Place of Presentation
      熊本
    • Year and Date
      2012-12-19
  • [Presentation] 出芽酵母の休止期において形成されるプロテアソーム顆粒の解析2012

    • Author(s)
      雪井悠,新井直子,田中啓二,佐伯泰
    • Organizer
      第35回分子生物学会
    • Place of Presentation
      博多
    • Year and Date
      2012-12-14
  • [Presentation] プロテアソーム可塑性 : 分子集合から顆粒形成まで2012

    • Author(s)
      佐伯泰,雪井悠,土屋光,田中啓二
    • Organizer
      第85回日本生化学会大会シンポジウム
    • Place of Presentation
      博多
    • Year and Date
      2012-12-14
  • [Presentation] 出芽酵母の休止期において形成されるプロテアソームストレージ顆粒の解析2012

    • Author(s)
      雪井悠,新井直子,田中啓二,佐伯泰
    • Organizer
      酵母遺伝学フォーラム第45回研究報告会
    • Place of Presentation
      宇治
    • Year and Date
      2012-09-05
  • [Presentation] 細胞内タンパク質分解装置プロテアソームの分子集合と作動機構2012

    • Author(s)
      佐伯泰,坂田絵理,雪井悠,水島恒祐, W. Baumeister,田中啓二
    • Organizer
      酵母遺伝学フォーラム第45回研究報告会
    • Place of Presentation
      宇治
    • Year and Date
      2012-09-05
  • [Presentation] 細胞内タンパク質分解装置プロテアソームの分子集合と作動機構2012

    • Author(s)
      佐伯泰,坂田絵理,白燦基,佐甲靖志, W. Baumeister,田中啓二
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋
    • Year and Date
      2012-06-21
  • [Book] プロテアソームの作動機構とダイナミクス「構造生命科学で何がわかるのか何ができるのか」実験医学・増刊号32巻(10号)2014

    • Author(s)
      佐伯泰,水島恒裕
    • Total Pages
      1617-1622
    • Publisher
      羊土社
  • [Book] 細胞膜修復機構におけるプロテアソームの役割.細胞工学31巻2012

    • Author(s)
      河野恵子,佐伯泰,吉田知史,田中啓二,David Pellman
    • Total Pages
      1152-1153
    • Publisher
      秀潤社
  • [Book] 巨大で複雑な蛋白分解装置の立体構造と活性調節機構.「特集/蛋白構造-機能連関解析と治療薬開発への応用」内分泌・糖尿病・代謝内科、第35巻12月号2012

    • Author(s)
      佐伯泰
    • Total Pages
      523-532
    • Publisher
      科学評論社
  • [Remarks]

    • URL

      http://www.igakuken.or.jp/pro-meta/

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Published: 2015-06-25  

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