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2013 Fiscal Year Final Research Report

Analysis for chromosomal regulation of HIV gene expression by proviral labeling

Research Project

  • PDF
Project/Area Number 24790438
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Virology
Research InstitutionKyoto University

Principal Investigator

EBINA Hirotaka  京都大学, ウイルス研究所, 助教 (60541951)

Project Period (FY) 2012-04-01 – 2014-03-31
KeywordsHIV / 潜伏感染 / クロマチン / ゲノム編集
Research Abstract

Aim of this study is to understand the chromosomal regulation for HIV expression. We planned to understand the spatial and chromosomal regulation of HIV provirus by using LacO/I system. To apply LacO/I system, Lac O repeat sequence must be inserted into HIV provirus in vivo. Therefore, we explored the potential of CRISPR/Cas9 system to edit HIV-1 genome as the first step. We found that CRISPR/Cas9 system efficiently cleaved and mutated HIV provirus in T cells, resulting in disturbing the expression. Furthermore, we established a new method that induces precise mutation in HIV provirus through HDR repair pathway using CRISPR/Cas9 system. It is suggested that these technologies enable to insert LacO repeat sequence into HIV provirus and have a potential to discover chromosomal regulation of HIV gene expression.

  • Research Products

    (14 results)

All 2013 2012 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (9 results) Remarks (2 results)

  • [Journal Article] Harnessing the CRISPR/Cas9 system to disrupt latent HIV-1 provirus2013

    • Author(s)
      Ebina H, Misawa N, Kanemura Y, Koyanagi Y
    • Journal Title

      Scientific Reports

      Volume: 3 Pages: 2510

    • Peer Reviewed
  • [Journal Article] Integrase-independent HIV-1 infection is augmented under conditions of DNA damage and produces a viral reservoir2012

    • Author(s)
      Ebina H, Kanemura Y, Suzuki Y, Urata K, Misawa N, Koyanagi Y
    • Journal Title

      Virology

      Volume: 427(1) Pages: 44-50

    • Peer Reviewed
  • [Journal Article] The hematopoietic cell-specific Rho GTPase inhibitor ARHGDIB/D4GDI limits HIV-1 replication2012

    • Author(s)
      Watanabe T, Urano E, Miyauchi K, Ichikawa R, Hamatake M, Misawa N, Sato K, Ebina H, Koyanagi Y, Komano J
    • Journal Title

      AIDS Res Hum Retroviruses

      Volume: 28(8) Pages: 913-22

    • Peer Reviewed
  • [Presentation] Development of the CRISPR/Cas9 system editing for latent HIV-1 provirus2013

    • Author(s)
      蝦名博貴、三沢尚子、金村優香、小柳義夫
    • Organizer
      第36回日本分子生物学会年会
    • Year and Date
      20130000
  • [Presentation] ゲノム編集技術による潜伏HIVプロウイルスの制御と除去2013

    • Author(s)
      蝦名博貴、三沢尚子、金村優香、小柳義夫
    • Organizer
      第27回日本エイズ学会学術集会
    • Year and Date
      20130000
  • [Presentation] ゲノム編集技術による潜伏HIVプロウイルスの制御と除去2013

    • Author(s)
      蝦名博貴
    • Organizer
      第3回ゲノム編集研究会
    • Year and Date
      20130000
  • [Presentation] I型IFN発現制御におけるSAMHD1の新規機能の解析2013

    • Author(s)
      金村優香、蝦名博貴、小柳義夫
    • Organizer
      第36回日本分子生物学会年会
    • Year and Date
      20130000
  • [Presentation] ウイルス感染により誘導されるIFNの発現制御とウイルス複製におけるSAMHD1の役割2012

    • Author(s)
      金村優香, Peter Gee,蝦名博貴,小柳義夫
    • Organizer
      第35回日本分子生物学年会
    • Place of Presentation
      福岡、4P-0447
    • Year and Date
      20121200
  • [Presentation] DNA damage induces illegitimate integration of HIV-1 in the presence of integrase inhibitor, leading to produce a viral reservoir2012

    • Author(s)
      Ebina H, Kanemura Y, Suzuki Y, Urata K, Misawa N, Koyanagi Y
    • Organizer
      37^<th> Retroviruses Meeting Cold Spring Harbor
    • Year and Date
      20120000
  • [Presentation] インテグラーゼ非依存的なHIV cDNAの組込み機構2012

    • Author(s)
      蝦名博貴
    • Organizer
      第14回白馬シンポジウム
    • Year and Date
      20120000
  • [Presentation] 生細胞におけるHIV cDNAの可視化とイメージング2012

    • Author(s)
      蝦名博貴、金村優香、小柳義夫
    • Organizer
      第35回日本分子生物学会年会
    • Year and Date
      20120000
  • [Presentation] HIV cDNAの可視化とライブイメージングの確立2012

    • Author(s)
      蝦名博貴、金村優香、小柳義夫
    • Organizer
      第60回日本ウイルス学会学術集会
    • Year and Date
      20120000
  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/virus/kansenbyoutai.html

  • [Remarks]

    • URL

      http://www.virus.kyoto-u.ac.jp/Lab/KoyanagiHP/saito/TOP.html

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Published: 2015-06-25  

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