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1987 Fiscal Year Final Research Report Summary

Studies on electronic structures and reactivities of an oxygenated form of heme-containing enzymes by vibrational spectroscopic methods

Research Project

Project/Area Number 61480469
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 代謝生物化学
Research InstitutionSchool of Medicine,Keio University

Principal Investigator

ISHIMURA Yuzuru  School of Medicine, Keio University, Professor, 医学部, 教授 (40025599)

Co-Investigator(Kenkyū-buntansha) IIZUKA Tetsutaro  School of Medicine, Keio University, Associate Professor (present affiliation; T, 医学部(現理化学研究所無機化学部門主任研究員), 助教授 (30029475)
WATANABE Yoshihito  School of Medicine, Keio University, Assistant Professor, 医学部, 助手 (10201245)
MITANI Fumiko  School of Medicine, Keio University, Assistant Professor, 医学部, 助手 (60041852)
MAKINO Ryu  School of Medicine, Keio University, Assistant Professor, 医学部, 講師 (40101026)
Project Period (FY) 1986 – 1987
Keywordsoxygen activation / infrared spectroscopy / resonance Raman spectroscopy / cytochrome P450cam O-O stretching frequency / プチダレドキシン / ペルオキシダーゼ / Compound II
Research Abstract

The electronic structure of oxygensted and carbonyl complexes of hemecontaining enzymes has been examined by infrared and resonance Raman spectroscopic methods. By comparing the results on cytochrome P450_<cam> with those on other enzymes, the oxygen activation mechanism of P450_<cam> has been beduced as follows.
1) Effector action of substrate; by analyzing the effects of a substrate on the Fe-CO stretch of P450_<cam>-CO complex, the substrate, camphor was found to interact with the Fe-CO portion, thereby weakening the strength of C-O bond.
2) O-O stretch of P450_<cam>-O_2 complex; the O-O stretching frequency of P450_<cam>-O_2 complex detected at 1141 dm ^<-1> was almost identical with that for the oxygenated form of myoglobin, suggesting that the electronic strucxture of both proteins was Fe^<3+>-O_2^-.
3) Effector action of putidaredoxin; by analyses of the C-O stretch in P450_<cam>-CO complex, putidaredoxin was found to bind stoichiometrically to P450_<cam>- CO complex with a weakening in the strength of the C-O bond. Weakening of the C-N bond in C^<15>N^-- ferric P450_<cam> complex was also observed by ^<15> N NMR analyses. From these findings, we speculate that the binding of putidaredoxin facilitates the O-O bond cleavage by weakening the O-O bond strength, being a most important step in the oxygen activation by cytochrome P450_<cam>.
4) The electronic structure of catalytically active intermediate, whose formation has been hypothesized during the one-electron reduction of oxygenated P450_<cam>, has been considered to be isoelectronic to peroxidase intermediate, compound I of II. Even for the peroxidase intermediate, however, its structure remained unclear. From this point of view, the coordination structure of compound II of native, and heme- and metalsubstituted peroxidase was analyzed by a resonance Raman spectroscopy. The results indicate definitively that the coordination structure of compound II is Fe(IV)=O,but not Fe(IV)-OH,

  • Research Products

    (22 results)

All Other

All Publications (22 results)

  • [Publications] Makino, R.;Uno, T.;Nishimura, Y.;Iizuka, T.;Tsuboi, M;Ishimura, Y.: Journal of Biological Chemistry. 261. 8376-8382 (1986)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Makino, R.;Tanaka, T.;Iizuka, T.;Ishimura, Y.;Kanegasaki, S.: Journal of Biological Chemistry. 261. 11444-11447 (1986)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kano, S.;Iizuka, T.;Ishimura, Y.;Fujuki, H.;Sugimura, T.: Biochemical and Biophysical Research Communications. 143. 672-677 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Uno,T.;Nishimura, Y;Tsuboi, M.;Makino, R.;Iizuka, T.;Ishimura, Y.: Journal of Biological Chemistry. 262.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tanaka, T.;Kanegasaki, S.;Makino, R.;Iizuka, T.;Ishimura, Y.: Biochemical and Biophysical Research Communications. 114. 606-612 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shinohara, A.;Kamataki, T.;Iizuka, T.;Ishimura, Y.;Ogoshi, H.;Okuda, K.;Kato, R.: Japan Journal of Pharmacology. 45. 107-114 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Oyanagi, T.;Iizuka, T.;Matsushita, T.;Saigo, S.;Makino, R.;Ishimura, Y.;Ishiguro, T.: Journal of the Physical Society of Japan. 56. 3381-3388 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nishimura, Y.;Uno, T.;Tsuboi, M;Makino, R.;Iizuka, T.;Ishimura, Y.: "Time Resolved Vibrational Spectroscopy-proceedtin of the JSPS/NSF symposium (Atkinson, G. H. ed) ---Active site confomations of horseradish peroxidase as reaveled by time resolved resonance Raman spectroscopy" Gordeon and Breach Science Publishers, 125-142 (1986)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 牧野龍, 石村巽: "蛋白質核酸酵素(臨時増刊血色素の分子生理と分子病理)トリプトファン二原子酸素添加酵素とその反応機構" 共立出版, 752-756 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Makino, R.;Uno, T.;Nishimura, Y.;Iizuka, T.;Tsuboi, M.;Ishimura, Y.: "The Role of Oxygen in Chmistry and Biochemistry -Coordination Structures and reactivities of compound II in iron and manganese horseradish peroxidase-" Elsevier publishing company, 477-482 (1988)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ishimura, Y.;Makino, R.;Iizuka, T.;Shimada, H.: "Proceedings of Yamada conference XVII on cytochrome P-450:new trends -Resonance Raman and infrared spectral studies on carbon monoxide complexs of cytochrome P-450cam-" Yamada Science Foundation, 151-153 (1987)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Makino,R.,Nishimura,Y.,Inzuka,T.,Tsuboi,M.,& Ishimura,Y.: "Coodination structures and reactivities of compound II in irom and manganese horseradish peroxidase" Journal of Biological Chemistry. 261. 8376-8382 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Makino,R.,Tanaka,T.,Iizuka,T.,Ishimura,Y.,& Kanegasaki,S.: "Stoichiometric conversion of oxygen to superoxide anion during the respiratory burst in neutrophils - Direct evidence by a new method for measurements of superoxide anion with diacetyldeuteroheme-substituted horseradish peroxidase" Journal of Biological Chemistry. 261. 11444-11447 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kano,S.,Iizuka,T.,Ishimura,Y.,Fujiki,H.,& Sugimura,T.: "Stimulation of superoxide anion formation by the non-TPA type tumor promoters palytoxin and thapsigargin in porcine and human neutrophils" Biochemical and Biophysical Research Communications. 143. 672-677 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Uno,T.,Nishimura,Y.,Tsuboi,M.,Makino,R.,Iizuka,T.,& Ishimura,Y.: "Two types of conformers with distinct Fe-CO configuration in the ferrous CO complex of horseradish peroxidase; resonance Raman and infrared studies" Journal of Biological Chemistry. 262. 4549-4556 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tanaka,T.,Kanegasaki,S.,Makino,R.,Iizuka,T.,& Ishimura,Y.: "Saturated and trans-unsaturated fatty acids elicit high level of superoxide generation in intact and cell-free preparations of neutrophils" Biochemical and Biophysical Research Communications. 114. 606-612 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shinohara,A.,Kamataki,T.,Iizuka,T.,Ishimura,Y.,Ogoshi,H.,Okuda,K.,& Kato,R.: "Drug oxidation activities of horseradish peroxidase, myoglobin and cytochrome P450cam reconstituted with synthetic hemes" Japan Journal of Pharmacology. 45. 107-114 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Oyanagi,T.,Iizuka,T.,Matsushita,T.,Saigo,S.,Makino,R.,Ishimura,Y.,& Ishiguro,T.: "Local structure of heme-iron studied by high-resolution XANES; thermal spin equilibrium in myoglobin" Journal of the Physical Society of Japan. 56. 3381-3388 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nishimura,Y.,Uno,T.,Tsuboi,M.,Mskino,R.,Iizuka,T.,& Ishimura: Gorden and Breach Science Publishers. Active site conformations of horserabish peroxidase as revealed by time resolved resonance Raman spectroscopy in Time Resolved Vibrational Spectroscopy (Atkinson,G,H. ed.), 125-142 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Makino,R.,& Ishimura,Y.: Kyoritsu Shuppan. Tryptophan 2,3-dioxyqenases and its reaction mechanism in Protein, Nucleic acid, Enzyme, 752-756 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Makino,R.,Uno,T.,Nishimura,Y.,Iizuka,T.,Tsuboi,M.,& Ishimura,y.: Elsevier. Coordination structures and reactivities of compoud II in iron and manganese horseradish peroxidase in The Role of Oxyen in Chemistry and Biochemistry, 477-482 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishimura,Y.,Makino,R.,Iizuka,T.,& Shimada,H.: Yamada Science Foundation. Resonance Raman and infrared spectral studies on carbon monoxide complex of cytochrome P450cam in Rpoceedings of Yamada conference XVII on cytochrome P-450: new trends, 151-153 (1987)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1989-03-30  

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