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Modeling of 3D morphogenesis through rotational and collective cell migration

Planned Research

Project AreaDiscovery of the logic that establishes the 3D structure of organisms
Project/Area Number 15H05859
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionThe University of Tokyo

Principal Investigator

HIroyuki Takeda  東京大学, 大学院理学系研究科(理学部), 教授 (80179647)

Project Period (FY) 2015-06-29 – 2020-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥119,210,000 (Direct Cost: ¥91,700,000、Indirect Cost: ¥27,510,000)
Fiscal Year 2019: ¥23,140,000 (Direct Cost: ¥17,800,000、Indirect Cost: ¥5,340,000)
Fiscal Year 2018: ¥23,270,000 (Direct Cost: ¥17,900,000、Indirect Cost: ¥5,370,000)
Fiscal Year 2017: ¥23,270,000 (Direct Cost: ¥17,900,000、Indirect Cost: ¥5,370,000)
Fiscal Year 2016: ¥23,140,000 (Direct Cost: ¥17,800,000、Indirect Cost: ¥5,340,000)
Fiscal Year 2015: ¥26,390,000 (Direct Cost: ¥20,300,000、Indirect Cost: ¥6,090,000)
Keywordsゼブラフィッシュ / 体節形成 / 3次元 / シミュレーション / 形態形成 / 3次元
Outline of Final Research Achievements

3D tissue morphogenesis in animals accompanies massive cell proliferation, cell migration and compartmentalization of a cell population. To understand these processes, we examined cellular and molecular mechanisms underlying 3D morphogenesis of somites using medaka and zebrafish as models, focusing dorsoventral patterning and elongation along the dorso-ventral axis. We identified a subgroup of dermomyotomal cells called horizontal boundary cells (HBCs) as crucial players for compartmentalization of dorsal and ventral cells. Embryological and genetic analyses demonstrated that HBCs play crucial roles in
the two major events of the process, i.e., refinement and maintenance. Furthermore, by tracking cell behavior of all cells in a somite, we elucidated a logic for somite tissue elongation, in which the regional difference in the speed of migrating cells in a somite facilitates cell rearrangement and promote elongation.

Academic Significance and Societal Importance of the Research Achievements

iPSやES細胞など幹細胞の研究が進み、再生医療などへの応用が進んでいる。これらの幹細胞は試験管内で様々な細胞種へ分化誘導することが可能である。一方、成体を維持する器官や組織は、複数の細胞種で構成され、それらが特定の高次構造の下に配置されている。このような構造があってはじめて器官は正常にかつ効率よく機能する。現在、分化した細胞から試験管内で3次元構造の組織構造を有するオルガノイドを作成する研究は進んでいるが、3次元構造を作るロジックは理解できていない。成体内の器官に近い、または任意の形のオルガノイドを作成するために、本研究の器官形成ロジックの理解は重要である。

Report

(6 results)
  • 2020 Final Research Report ( PDF )
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (37 results)

All 2020 2019 2018 2017 2016 Other

All Int'l Joint Research (6 results) Journal Article (5 results) (of which Peer Reviewed: 5 results,  Open Access: 4 results) Presentation (20 results) (of which Int'l Joint Research: 15 results,  Invited: 1 results) Remarks (6 results)

  • [Int'l Joint Research] COS, Heidelberg University(ドイツ)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Havard Medical School(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Heidelberg University(ドイツ)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] COS, Heiderberg University(ドイツ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Harvard Medical School(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Institute of Science and Technology(Austria)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Noonan syndrome‐associated biallelic LZTR1 mutations cause cardiac hypertrophy and vascular malformations in zebrafish2019

    • Author(s)
      Nakagama Yu、Takeda Norihiko、Ogawa Seishi、Takeda Hiroyuki、Furutani Yoshiyuki、Nakanishi Toshio、Sato Tatsuyuki、Hirata Yoichiro、Oka Akira、Inuzuka Ryo
    • Journal Title

      Molecular Genetics & Genomic Medicine

      Volume: 8 Issue: 3

    • DOI

      10.1002/mgg3.1107

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Horizontal Boundary Cells, a Special Group of Somitic Cells, Play Crucial Roles in the Formation of Dorsoventral Compartments in Teleost Somite2019

    • Author(s)
      Kota Abe,Atsuko Shimada,Sayaka Tayama,Hotaka Nishikawa,Takuya Kaneko, Sachiko Tsuda,Akari Karaiwa,Takaaki Matsui,Tohru Ishitani,Hiroyuki Takeda
    • Journal Title

      Cell Reports

      Volume: 27 Issue: 3 Pages: 928-939

    • DOI

      10.1016/j.celrep.2019.03.068

    • Related Report
      2019 Annual Research Report 2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Systematic studies of all PIH proteins in zebrafish reveal their distinct roles in axonemal dynein assembly.2018

    • Author(s)
      Yamaguchi H, Oda T, Kikkawa M, Takeda H
    • Journal Title

      Elife

      Volume: 7

    • DOI

      10.7554/elife.36979

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Zic Genes in Teleosts: Their Roles in Dorsoventral Patterning in the Somite2018

    • Author(s)
      Abe K., Kawanishi T., Takeda H.
    • Journal Title

      Advances in Experimental Medicine and Biology

      Volume: 1046 Pages: 141-156

    • DOI

      10.1007/978-981-10-7311-3_8

    • ISBN
      9789811073106, 9789811073113
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Targeted ablation of pancreatic β cells in medaka2017

    • Author(s)
      Takayoshi Otsuka and Hiroyuki Takeda
    • Journal Title

      Zoological Science

      Volume: 印刷中

    • NAID

      40021219582

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Wnt11r is a myotome dorsalization factor during somite differentiation2020

    • Author(s)
      Ann Kathrin Heilig, Atsuko Shimada, Ryohei Nakamura, Toru Kawanishi, Jochen Wittbrodt, Hiroyuki Takeda
    • Organizer
      The 26th Japanese Medaka and Zebrafish Meeting
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Coordinated growth of midline tissues in the zebrafish body axis elongation2020

    • Author(s)
      Toru Kawanishi, HIroyuki Takeda, Sean Megason
    • Organizer
      53rd Annual Meeting of the Japanese Society of Developmental Biology
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Coordinated growth of midline tissues in the zebrafish axis elongation2019

    • Author(s)
      2.Toru Kawanishi T, HIroyuki Takeda
    • Organizer
      52nd Annual Meeting of the Japanese Society of Developmental Biology
    • Related Report
      2019 Annual Research Report
  • [Presentation] Zic1/Zic4 mediate between canonical Wnt signaling and Wnt11r during somite differentiation2019

    • Author(s)
      Ann Kathrin Heilig, Atsuko Shimada, Ryohei Nakamura, Jochen Wittbrodt, Hiroyuki Takeda
    • Organizer
      52nd Annual Meeting of the Japanese Society of Developmental Biology
    • Related Report
      2019 Annual Research Report
  • [Presentation] Zic1/Zic4 mediate between canonical Wnt signaling and Wnt11r during somite differentiation2019

    • Author(s)
      Ann Kathrin Heilig, Atsuko Shimada, Ryohei Nakamura, Jochen Wittbrodt, Hiroyuki Takeda
    • Organizer
      2nd JSDB-GfE Young scientist exchange meeting
    • Related Report
      2019 Annual Research Report
  • [Presentation] Coordinated growth of midline tissues in the zebrafish axis elongation2019

    • Author(s)
      Kawanishi T, Takeda H, Megason S
    • Organizer
      52nd Annual Meeting of the Japanese Society of Developmental Biology
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Canonical and non-canonical Wnt signaling are linked by zic1/zic4 in dorsal somite patterning2019

    • Author(s)
      Heilig AK, Nakamra R, Shimada A, Wittbrodt J, Takeda H
    • Organizer
      52nd Annual Meeting of the Japanese Society of Developmental Biology
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Live-imaging and 3D analysis of zebrafish somite morphogenesis2018

    • Author(s)
      Tong Y, Kametani H, Shimada A, Akiyama M, Inoue Y, Takeda H
    • Organizer
      12th Gfe School 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Coordinated tissue elongation in the zebrafish posterior body2018

    • Author(s)
      Kawanishi T, Megason S
    • Organizer
      Japan-Tronto Morphogenesis Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Rotational cell migration: a new logic behind 3D somite morphogenesis2018

    • Author(s)
      Tong Y, Kametani H, Shimada A, Akiyama M, Inoue Y, Takeda H
    • Organizer
      Japan-Tronto Morphogenesis Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 3D Cell behavior in zebrafish somite morphogenesis2018

    • Author(s)
      Tong Y, Kametani H, Shimada A, Akiyama M, Inoue Y, Takeda H
    • Organizer
      第70回日本細胞生物学会 第51回日本発生生物学会合同大会
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Role of rotational collective cell migration in somite morphogenesis2018

    • Author(s)
      Kametani H, Tong Y, Shimada A, Takeda H
    • Organizer
      第70回日本細胞生物学会 第51回日本発生生物学会合同大会
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 3D morphogenesis and dorsoventral patterning in zebrafish somites2017

    • Author(s)
      Hiroyuki Takeda
    • Organizer
      3D morphogenesis Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Cellular and molecular mechanisms for the establishment of the lifelong dorsoventral compartment boundary in the teleost trunk2017

    • Author(s)
      Kota Abe
    • Organizer
      18th International Congress of Developmental Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ゼブラフィッシュ体節形態形成の3次元解析2017

    • Author(s)
      仝 由悦
    • Organizer
      日本発生生物学会第50回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Cellular and molecular mechanisms for the establishment of the dorsal and ventral compartments in the teleostsomite2017

    • Author(s)
      阿部 耕太
    • Organizer
      日本発生生物学会第50回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Dorsoventral patterning and 3D morphogenesis of teleost somites.2016

    • Author(s)
      Hiroyuki Takeda
    • Organizer
      Austria-Japan joint meeting "Understanding the logic behind developmental dynamics"at IST Austria
    • Place of Presentation
      Klosterneuburg(Austria)
    • Year and Date
      2016-11-28
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Toward understanding of the mechanical force during tissue morphogenesis in zebrafish2016

    • Author(s)
      Harunobu Kametani
    • Organizer
      The Joint meeting of the 22nd International Congress of Zoology & the87th meeting of the Zoological Society of Japan
    • Place of Presentation
      Okinawa Convention Center(沖縄県宜野湾市)
    • Year and Date
      2016-11-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The establishment of the zic1-expression boundary that demarcates the dorso-ventral module in the medaka trunk throughout life.2016

    • Author(s)
      Kota Abe
    • Organizer
      The Joint meeting of the 22nd International Congress of Zoology & the87th meeting of the Zoological Society of Japan
    • Place of Presentation
      Okinawa Convention Center(沖縄県宜野湾市)
    • Year and Date
      2016-11-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of the zic-expressing dorsal compartment in fish and its implications for evolution of the vertebrate.2016

    • Author(s)
      Kota Abe
    • Organizer
      The Joint meeting of the 22nd International Congress of Zoology & the87th meeting of the Zoological Society of Japan
    • Place of Presentation
      Okinawa Institute of Science and Technology Graduate University(沖縄県国頭郡)
    • Year and Date
      2016-11-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Remarks] 東京大学大学院理学系研究科生物科学専攻動物発生学研究室

    • URL

      http://www.bs.s.u-tokyo.ac.jp/~hassei/index.html

    • Related Report
      2019 Annual Research Report
  • [Remarks] 東京大学大学院理学系研究科生物科学専攻動物発生学研究室

    • URL

      http://www.bs.s.u-tokyo.ac.jp/~hassei/

    • Related Report
      2018 Annual Research Report
  • [Remarks]

    • URL

      http://www.bs.s.u-tokyo.ac.jp/~hassei/index.html

    • Related Report
      2017 Annual Research Report
  • [Remarks] Virtual labratory of 3D Molphologic

    • URL

      http://www.3d-logic.jp/publication.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 東京大学大学院理学系研究科生物科学専攻動物発生学研究室

    • URL

      http://www.biol.s.u-tokyo.ac.jp/users/hassei/

    • Related Report
      2016 Annual Research Report
  • [Remarks] 東京大学大学院理学系研究科動物発生学研究室

    • URL

      http://www.biol.s.u-tokyo.ac.jp/users/hassei/

    • Related Report
      2015 Annual Research Report

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Published: 2015-07-02   Modified: 2022-11-04  

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