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Development of mimic biological systems for multimolecular crowding and functional materials working in cells

Planned Research

Project AreaChemical Approaches for Miscellaneous / Crowding Live Systems
Project/Area Number 17H06351
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionKonan University

Principal Investigator

Sugimoto Naoki  甲南大学, 先端生命工学研究所, 教授 (60206430)

Co-Investigator(Kenkyū-buntansha) 三好 大輔  甲南大学, フロンティアサイエンス学部, 教授 (50388758)
Project Period (FY) 2017-06-30 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥146,510,000 (Direct Cost: ¥112,700,000、Indirect Cost: ¥33,810,000)
Fiscal Year 2021: ¥27,300,000 (Direct Cost: ¥21,000,000、Indirect Cost: ¥6,300,000)
Fiscal Year 2020: ¥27,300,000 (Direct Cost: ¥21,000,000、Indirect Cost: ¥6,300,000)
Fiscal Year 2019: ¥27,300,000 (Direct Cost: ¥21,000,000、Indirect Cost: ¥6,300,000)
Fiscal Year 2018: ¥27,300,000 (Direct Cost: ¥21,000,000、Indirect Cost: ¥6,300,000)
Fiscal Year 2017: ¥37,310,000 (Direct Cost: ¥28,700,000、Indirect Cost: ¥8,610,000)
Keywords分子夾雑 / 細胞模倣実験系 / 生体分子の機能-環境定量相関 / 核酸構造 / 遺伝子発制御 / 生体分子の定量的機能-環境定量相関 / 遺伝子発現制御 / 定量的解析 / 擬似細胞内環境 / 核酸 / セントラルドグマ / 遺伝子発現の制御 / 細胞内活性分子 / 核酸非標準構造 / 物理化学的解析
Outline of Final Research Achievements

In this study, we carried out with our research the aim of chemically understanding the role of "multi-molecular crowding environment" and developing techniques to control the gene expression. First, cell-mimicked experimental systems in vitro were created by adding macromolecules and metabolites as co-solutes in aqueous solution. Under the cell-mimicked experimental systems, the structure and function of nucleic acids were analyzed using thermodynamic and kinetic analyses. Moreover, we developed database to predict nucleic acid structure and function in cells. Furthermore, using the database, we analyzed changes in the stability and function of the non-canonical DNA and RNA structures. Moreover, we found that the gene expressions were regulated by structure and stability of nucleic acids. Thus, we proposed “Quantitative Function-Environment Relationship (QFER)” of nucleic acids in the cell and developed methods to regulate gene expression based on QFER.

Academic Significance and Societal Importance of the Research Achievements

核酸の非二重らせん構造の代表例である四重鎖構造は、ヒトゲノムの30万カ所で形成できる可能性がある。さらに、がんや神経疾患関連遺伝子等の発現を制御することも報告され、医学、創薬、診断分野等で注目されている。本領域研究では、核酸の非二重らせん構造、さらには遺伝子発現を、細胞環境因子で制御する技術を開発した。細胞の夾雑環境による遺伝子発現制御システムを開発できたことで、分子夾雑の細胞機能における役割を世界に先駆けて提示ができ、医療、診断、創薬など、実社会に貢献する幅広い応用分野への研究展開が期待される。

Report

(6 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (320 results)

All 2022 2021 2020 2019 2018 2017 Other

All Int'l Joint Research (16 results) Journal Article (67 results) (of which Int'l Joint Research: 18 results,  Peer Reviewed: 59 results,  Open Access: 36 results) Presentation (225 results) (of which Int'l Joint Research: 85 results,  Invited: 76 results) Book (5 results) Remarks (6 results) Patent(Industrial Property Rights) (1 results)

  • [Int'l Joint Research] Reading大学(英国)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] 国立NMRセンター(スロベニア)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] コルカタ大学(インド)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] 長春中医薬大学(中国)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] National Institute of Chemistry(スロベニア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] KU Leuven(ベルギー)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Slovenian NMR Centre(スロベニア)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] University of Calcutta(インド)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Changchun Univ. of Chinese Medicine(中国)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] National Institute of Chemistry(スロベニア)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Russian Academy of Sciences(ロシア連邦)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Chinese Academy of Sciences(中国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] POSTECH(韓国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Calcutta(インド)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Cambridge/University of Reading(英国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] University of Calcutta(インド)

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Ruthenium Polypyridyl Complex Bound to a Unimolecular Chair-Form G-Quadruplex2022

    • Author(s)
      K. T. McQuaid, S. Takahashi, L. Baumgaertner, D. J. Cardin, N. G. Paterson, J. P. Hall, N. Sugimoto, and C. J. Cardin
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 144 Issue: 13 Pages: 5956-5964

    • DOI

      10.1021/jacs.2c00178

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Dielectricity of a molecularly crowded solution accelerates NTP misincorporation during RNA-dependent RNA polymerization by T7 RNA polymerase2022

    • Author(s)
      S. Takahashi, S. Matsumoto, P. Chilka, S. Ghosh, H. Okura, and N. Sugimoto
    • Journal Title

      Sci. Rep.

      Volume: 12 Issue: 1 Pages: 1149-1149

    • DOI

      10.1038/s41598-022-05136-8

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Replication Control of Human Telomere G-Quadruplex DNA by G-Quadruplex Ligands Dependent on Solution Environment2022

    • Author(s)
      S. Takahashi, S. Bhowmik, S. Sato, S. Takenaka, and N. Sugimoto
    • Journal Title

      Life

      Volume: 12 Issue: 4 Pages: 533-533

    • DOI

      10.3390/life12040553

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Applicability of Nearest-neighbour Model for Pseudoknot RNAs2022

    • Author(s)
      S. Satpathi, T. Endoh, and N. Sugimoto
    • Journal Title

      Chem. Commun.

      Volume: in press Issue: 40 Pages: 5952-5955

    • DOI

      10.1039/d1cc07094k

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A volumetric strategy for quantitatively elucidating local hydration network around a G-quadruplex2022

    • Author(s)
      S. Matsumoto, S. Takahashi, S. Bhowmik, T. Ohyama, and N. Sugimoto
    • Journal Title

      Anal. Chem.

      Volume: in press

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Significant structural change in human c-Myc promoter G-quadruplex upon peptide binding in potassium2022

    • Author(s)
      Nikita Kundu, Taniya Sharma, Sarvpreet Kaur, Mamta Singh, Vinit Kumar, Uttam Sharma, Aklank Jain, Jadala Shankaraswamy, Daisuke Miyoshi, Sarika Saxena
    • Journal Title

      RSC Adv.

      Volume: 12 Issue: 13 Pages: 7594-7604

    • DOI

      10.1039/d2ra00535b

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Chemical Modulation of DNA Replication along G-Quadruplex Based on Topology-Dependent Ligand Binding2021

    • Author(s)
      S. Takahashi, A. Kotar, H. Tateishi-Karimata, S. Bhowmik, Z.-F. Wang, T.-C. Chang, S, Sato, S. Takenaka, J. Plavec, and N. Sugimoto
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 143 Issue: 40 Pages: 16458-16469

    • DOI

      10.1021/jacs.1c05468

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Intramolecular G-quadruplex-hairpin loop structure competition of a GC-rich exon region in the TMPRSS2 gene2021

    • Author(s)
      W. Sugimoto, N. Kinoshita, M. Nakata, T. Ohyama, H. Tateishi-Karimata, T. Nishikata, N. Sugimoto, D. Miyoshi, and K. Kawauchi
    • Journal Title

      Chem. Commun.

      Volume: 58 Issue: 1 Pages: 48-51

    • DOI

      10.1039/d1cc05523b

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effect of DNA modifications on the transition bet and non-canoncial DNA stransures in CpG islands during senescence2021

    • Author(s)
      S. Matsumoto, H. Tateishi-Karimata, T. Ohyama, and N. Sugimoto
    • Journal Title

      RSC Adv.

      Volume: 11 Issue: 59 Pages: 37205-37217

    • DOI

      10.1039/d1ra07201c

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Combined Effects of Methylated Cytosine and Molecular Crowding on the Thermodynamic Stability of DNA Duplexes2021

    • Author(s)
      Mitsuki Tsuruta, Yui Sugitani, Naoki Sugimoto, Daisuke Miyoshi
    • Journal Title

      Int. J. Mol. Sci.

      Volume: 22 Issue: 2 Pages: 947-947

    • DOI

      10.3390/ijms22020947

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 核酸の化学修飾と構造や相分離能の相関2021

    • Author(s)
      鶴田 充生, 取井 猛流, 杉本 渉, 川内 敬子, 三好 大輔
    • Journal Title

      月刊「細胞」

      Volume: 53 Pages: 910-913

    • NAID

      40022799104

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] がん関連mRNAと光線力学療法2021

    • Author(s)
      三好 大輔, 杉本 直己
    • Journal Title

      CSJカレントレビュー

      Volume: 39 Pages: 75-83

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] がん関連RNAを破壊する分子標的型光線力学療法2021

    • Author(s)
      杉本 渉, 橋本 佳樹, 川内 敬子, 三好 大輔
    • Journal Title

      BIO Clinica

      Volume: 36 Pages: 65-67

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detection of Intracellular Reactive Oxidative Species Using the Fluorescent Probe Hydroxyphenyl Fluorescein2021

    • Author(s)
      Sugimoto Wataru、Miyoshi Daisuke、Kawauchi Keiko
    • Journal Title

      Methods Mol Biol (Live Cell Imaging)

      Volume: 2274 Pages: 207215-207215

    • DOI

      10.1007/978-1-0716-1258-3_18

    • ISBN
      9781071612576, 9781071612583
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Watson-Crick versus Hoogsteen Base Pairs: Chemical Strategy to Encode and Express Genetic Information in Life2021

    • Author(s)
      Takahashi Shuntaro、Sugimoto Naoki
    • Journal Title

      Accounts of Chemical Research

      Volume: 54 Issue: 9 Pages: 2110-2120

    • DOI

      10.1021/acs.accounts.0c00734

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] New Insights into the Functions of Nucleic Acids Controlled by Cellular Microenvironments2021

    • Author(s)
      Matsumoto Saki、Sugimoto Naoki
    • Journal Title

      Topics in Current Chemistry

      Volume: 379 Issue: 3 Pages: 17-17

    • DOI

      10.1007/s41061-021-00329-7

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Roles of non-canonical structures of nucleic acids in cancer and neurodegenerative diseases2021

    • Author(s)
      H. Tateishi-Karimata and N. Sugimoto
    • Journal Title

      Nucleic Acids Res

      Volume: 49 Issue: 14 Pages: 7839-7855

    • DOI

      10.1093/nar/gkab580

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chemical Biology of Double Helical and Non-Double Helical Nucleic Acids: “To <i>B</i> or Not To <i>B</i>, That Is the Question”2021

    • Author(s)
      Sugimoto Naoki、Endoh Tamaki、Takahashi Shuntaro、Tateishi-Karimata Hisae
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: 94 Issue: 7 Pages: 1970-1998

    • DOI

      10.1246/bcsj.20210131

    • NAID

      130008076882

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 分子夾雑によって制御される核酸機能と疾患発症2021

    • Author(s)
      松本 咲, 杉本 直己
    • Journal Title

      月刊細胞

      Volume: 53 Pages: 4-7

    • Related Report
      2021 Annual Research Report
  • [Journal Article] 7章 がん関連mRNAと光線力学療法2021

    • Author(s)
      三好 大輔, 杉本 直己
    • Journal Title

      CSJカレントレビュー「生体分子と疾患」

      Volume: 39 Pages: 75-83

    • Related Report
      2021 Annual Research Report
  • [Journal Article] PartⅡ研究最前線, 14章 遺伝子発現における核酸の新機能2021

    • Author(s)
      松本 咲, 杉本 直己
    • Journal Title

      CSJカレントレビュー「進化を続ける核酸化学―ゲノム編集、非二重らせん、核酸医薬―」

      Volume: 41 Pages: 146-154

    • Related Report
      2021 Annual Research Report
  • [Journal Article] PartⅠ基礎概念と研究現場, 2章 細胞内の核酸物理化学2021

    • Author(s)
      高橋 俊太郎, 杉本 直己
    • Journal Title

      CSJカレントレビュー「進化を続ける核酸化学―ゲノム編集、非二重らせん、核酸医薬―」

      Volume: 41 Pages: 14-21

    • Related Report
      2021 Annual Research Report
  • [Journal Article] 第1章フロントランナーに聞く「令和の時代も進化を続ける核酸化学」2021

    • Author(s)
      神谷 真子、建石 寿枝、永 次史、山吉 麻子、杉本 直己
    • Journal Title

      CSJカレントレビュー「進化を続ける核酸化学―ゲノム編集、非二重+RC[-1]+RC

      Volume: 41

    • Related Report
      2021 Annual Research Report
  • [Journal Article] Signaling Aptamer Optimization through Selection Using RNA-Capturing Microsphere Particles2020

    • Author(s)
      Endoh Tamaki、Sugimoto Naoki
    • Journal Title

      Analytical Chemistry

      Volume: - Issue: 11 Pages: 7955-7963

    • DOI

      10.1021/acs.analchem.0c01338

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions2020

    • Author(s)
      S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, H. Tateishi-Karimata, and N. Sugimoto
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 117 Issue: 25 Pages: 14194-14201

    • DOI

      10.1073/pnas.1920886117

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effect of morecular crowding on the stability of RNA G-quadruplexes with various numbers of quartets and lengths of loops2020

    • Author(s)
      S. Matsumoto, H. Tateishi-Karimata, S. Takahashi, T. Ohyama, and N. Sugimoto
    • Journal Title

      Biochemistry

      Volume: 59 Issue: 28 Pages: 2640-2649

    • DOI

      10.1021/acs.biochem.0c00346

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular crowding induces primer extension by RNA polymerase through base stacking beyond Watson-Crick rules2020

    • Author(s)
      S. Takahashi, H. Okura, P. Chilika, S. Ghosh, and N. Sugimoto
    • Journal Title

      RSC Adv.

      Volume: 10 Issue: 55 Pages: 33052-33058

    • DOI

      10.1039/d0ra06502a

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effect of Molecular Crowding on DNA Polymerase Reactions along Unnatural DNA Templates2020

    • Author(s)
      S. Takahashi, P. Herdwijn, and N. Sugimoto
    • Journal Title

      Molecules

      Volume: 25 Issue: 18 Pages: 4120-4120

    • DOI

      10.3390/molecules25184120

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition2020

    • Author(s)
      D. Banerjee, H. Tateishi-Karimata, T. Ohyama, S. Ghosh, T. Endoh, S. Takahashi, and N. Sugimoto
    • Journal Title

      Nucleic Acids Res.

      Volume: 48 Issue: 21 Pages: 12042-12054

    • DOI

      10.1093/nar/gkaa572

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] RAS mRNAを狙った分子標的型光線力学療法2020

    • Author(s)
      杉本渉、川内敬子、三好大輔
    • Journal Title

      Medical Science Digest

      Volume: 46 Pages: 26-27

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] RNA phase separation-mediated direction of molecular trafficking under conditions of molecular crowding2020

    • Author(s)
      Kohata Kazuki、Miyoshi Daisuke
    • Journal Title

      Biophysical Reviews

      Volume: - Issue: 3 Pages: 669-676

    • DOI

      10.1007/s12551-020-00696-3

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Novel Strategy of Photodynamic Therapy Targeting RAS mRNA with G-Quadruplex Ligands for Cancer Treatment?2020

    • Author(s)
      T. Torii, W. Sugimoto, K. Kawauchi, D. Miyoshi
    • Journal Title

      J Data Mining Genomics Proteomics

      Volume: 11 Pages: 1000226-1000226

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Photosensitizers Based on G-Quadruplex Ligand for Cancer Photodynamic Therapy2020

    • Author(s)
      K. Kawauchi, R. Urano, N. Kinoshita, S. Kuwamoto, T. Torii, Y. Hashimoto, S. Taniguchi, M. Tsuruta, D. Miyoshi
    • Journal Title

      Genes

      Volume: 11 Issue: 11 Pages: 1340-1340

    • DOI

      10.3390/genes11111340

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications2020

    • Author(s)
      Takahashi Shuntaro、Bhattacharjee Snehasish、Ghosh Saptarshi、Sugimoto Naoki、Bhowmik Sudipta
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 2504-2504

    • DOI

      10.1038/s41598-020-59343-2

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions2020

    • Author(s)
      Teng Ye、Tateishi-Karimata Hisae、Ohyama Tatsuya、Sugimoto Naoki
    • Journal Title

      Molecules

      Volume: 25 Issue: 2 Pages: 387-387

    • DOI

      10.3390/molecules25020387

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Chemical biology of non-canonical structures of nucleic acids for therapeutic applications2020

    • Author(s)
      Tateishi-Karimata Hisae、Sugimoto Naoki
    • Journal Title

      Chemical Communications

      Volume: 56 Issue: 16 Pages: 2379-2390

    • DOI

      10.1039/c9cc09771f

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-quadruplex Structures2020

    • Author(s)
      H. Tateishi-Karimata, T. Ohyama, T. Muraoka, S. Tanaka, K. Kinbara, and N. Sugimoto
    • Journal Title

      Molecules

      Volume: 25 Issue: 3 Pages: 705-705

    • DOI

      10.3390/molecules25030705

    • NAID

      120006811187

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA2020

    • Author(s)
      Tateishi-Karimata Hisae、Banerjee Dipanwita、Ohyama Tatsuya、Matsumoto Saki、Miyoshi Daisuke、Nakano Shu-ich、Sugimoto Naoki
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 525 Issue: 1 Pages: 177-183

    • DOI

      10.1016/j.bbrc.2020.02.045

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides2020

    • Author(s)
      Kovacic Matic、Podbevsek Peter、Tateishi-Karimata Hisae、Takahashi Shuntaro、Sugimoto Naoki、Plavec Janez
    • Journal Title

      Nucleic Acids Research

      Volume: 48 Issue: 7 Pages: 3975-3986

    • DOI

      10.1093/nar/gkaa118

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] RNA G-Quadruplexes Facilitate RNA Accumulation in G-Rich Repeat Expansions2020

    • Author(s)
      Teng Ye、Tateishi-Karimata Hisae、Sugimoto Naoki
    • Journal Title

      Biochemistry

      Volume: 59 Issue: 21 Pages: 1961-2040

    • DOI

      10.1021/acs.biochem.0c00130

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency2019

    • Author(s)
      Endoh Tamaki、Sugimoto Naoki
    • Journal Title

      Molecules

      Volume: 24 Issue: 8 Pages: 1613-1613

    • DOI

      10.3390/molecules24081613

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 平成の化学キーワード 核酸の多様性を生みだすもう一つの塩基対相互作用 フーグスティーン塩基対2019

    • Author(s)
      高橋俊太郎、杉本直己
    • Journal Title

      化学

      Volume: 74 Pages: 24-25

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Quantitative Analysis of Stall of Replicating DNA Polymerase by G-Quadruplex Formation2019

    • Author(s)
      Takahashi Shuntaro、Sugimoto Naoki
    • Journal Title

      Methods in Molecular Biology

      Volume: 2035 Pages: 257-274

    • DOI

      10.1007/978-1-4939-9666-7_15

    • ISBN
      9781493996650, 9781493996667
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] C-rich sequence in a non-template DNA strand regulates structure change of G-quadruplex in a template strand during transcription2019

    • Author(s)
      Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
    • Journal Title

      Bull. Chem. Soc. Jpn.

      Volume: 92 Issue: 3 Pages: 572-577

    • DOI

      10.1246/bcsj.20180298

    • NAID

      130007614869

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterization of Intracellular Crowding Environments with Topology-Based DNA Quadruplex Sensors2019

    • Author(s)
      Takahashi Shuntaro、Yamamoto Johtaro、Kitamura Akira、Kinjo Masataka、Sugimoto Naoki
    • Journal Title

      Analytical Chemistry

      Volume: 91 Issue: 4 Pages: 2586-2590

    • DOI

      10.1021/acs.analchem.8b04177

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Validation of the nearest-neighbor model for Watson?Crick self-complementary DNA duplexes in molecular crowding condition2019

    • Author(s)
      Ghosh Saptarshi、Takahashi Shuntaro、Endoh Tamaki、Tateishi-Karimata Hisae、Hazra Soumitra、Sugimoto Naoki
    • Journal Title

      Nucleic Acids Research

      Volume: 47 Issue: 7 Pages: 0-0

    • DOI

      10.1093/nar/gkz071

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Bisubstrate Function of RNA Polymerases Triggered by Molecular Crowding Conditions2019

    • Author(s)
      Takahashi Shuntaro、Okura Hiromichi、Sugimoto Naoki
    • Journal Title

      Biochemistry

      Volume: 58 Issue: 8 Pages: 1081-1093

    • DOI

      10.1021/acs.biochem.8b01204

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Lighting up of thiazole orange on G-quadruplex DNA by high pressure2019

    • Author(s)
      Bhowmik Sudipta, Takahashi Shuntaro, Sugimoto Naoki
    • Journal Title

      ACS Omega

      Volume: 4 Pages: 0-0

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers2019

    • Author(s)
      Endoh Tamaki、Ohyama Tatsuya、Sugimoto Naoki
    • Journal Title

      Small

      Volume: 15 Issue: 26 Pages: 1805062-1805062

    • DOI

      10.1002/smll.201805062

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Osmolyte-Enhanced Protein Synthesis Activity of a Reconstituted Translation System2019

    • Author(s)
      Moriizumi Yoshiki、Tabata Kazuhito V.、Miyoshi Daisuke、Noji Hiroyuki
    • Journal Title

      ACS Synthetic Biology

      Volume: 8 Issue: 3 Pages: 557-567

    • DOI

      10.1021/acssynbio.8b00513

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 細胞の分子夾雑環境における核酸構造と核酸構造リガンドの挙動 ~細胞内でも望みの機能を発現する分子の合理設計に向けて~2019

    • Author(s)
      三好 大輔
    • Journal Title

      生命化学研究レター

      Volume: 58 Pages: 17-21

    • Related Report
      2018 Annual Research Report
    • Open Access
  • [Journal Article] Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins2018

    • Author(s)
      Natan Eviatar、Endoh Tamaki、Haim-Vilmovsky Liora、Flock Tilman、Chalancon Guilhem、Hopper Jonathan T. S.、Kintses B、Horvath Peter、Daruka Lejla、Fekete Gergely、Pal Csaba、Papp B、Oszi Erika、Magyar Z、Marsh Joseph A.、Elcock Adrian H.、Babu M. Madan、Robinson Carol V.、Sugimoto Naoki、Teichmann Sarah A.
    • Journal Title

      Nature Structural & Molecular Biology

      Volume: 25 Issue: 3 Pages: 279-288

    • DOI

      10.1038/s41594-018-0029-5

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations2018

    • Author(s)
      M. Trajkovski, T. Endoh, H. Tateishi-Karimata, T. Ohyama, S. Tanaka, J. Plavec, N. Sugimoto
    • Journal Title

      Nucleic Acids Research

      Volume: 46 Issue: 8 Pages: 4301-4315

    • DOI

      10.1093/nar/gky250

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Recovery of the Formation and Function of Oxidized G-Quadruplexes by a Pyrene-Modified Guanine Tract2018

    • Author(s)
      Takahashi Shuntaro、Kim Ki Tae、Podbevsek Peter、Plavec Janez、Kim Byeang Hyean、Sugimoto Naoki
    • Journal Title

      Journal of the American Chemical Society

      Volume: 140 Issue: 17 Pages: 5774-5783

    • DOI

      10.1021/jacs.8b01577

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Crowding Shifts the FMN Recognition Mechanism of Riboswitch Aptamer from Conformational Selection to Induced Fit2018

    • Author(s)
      Rode Ambadas B.、Endoh Tamaki、Sugimoto Naoki
    • Journal Title

      Angewandte Chemie International Edition

      Volume: 57 Issue: 23 Pages: 6868-6872

    • DOI

      10.1002/anie.201803052

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Co-Transcriptional Molecular Assembly Results in a Kinetically Controlled Irreversible RNA Conformational Switch2018

    • Author(s)
      Endoh Tamaki、Sugimoto Naoki
    • Journal Title

      Analytical Chemistry

      Volume: 90 Issue: 19 Pages: 11193-11197

    • DOI

      10.1021/acs.analchem.8b03427

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mirror-Image Dependence: Targeting Enantiomeric G-Quadruplex DNA Using Triplex Metallohelices2018

    • Author(s)
      C. Zhao、H. Song、P. Scott、A. Zhao、H. Tateishi-Karimata、N. Sugimoto、J. Ren、X. Qu
    • Journal Title

      Angew. Chem. Int. Ed.

      Volume: 57 Issue: 48 Pages: 15723-15727

    • DOI

      10.1002/anie.201809207

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A Turn-On Detection of DNA Sequences by Means of Fluorescence of DNA-Templated Silver Nanoclusters via Unique Interactions of a Hydrated Ionic Liquid2018

    • Author(s)
      Y. Teng,H. Tateishi-Karimata、T. Tsuruoka, N. Sugimoto
    • Journal Title

      Molecules

      Volume: 23 Issue: 11 Pages: 2889-2889

    • DOI

      10.3390/molecules23112889

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes2018

    • Author(s)
      Takahashi Shuntaro、Chelobanov Boris、Kim Ki、Kim Byeang、Stetsenko Dmitry、Sugimoto Naoki
    • Journal Title

      Molecules

      Volume: 23 Issue: 12 Pages: 3228-3228

    • DOI

      10.3390/molecules23123228

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] テトラエチレングリコールで修飾されたグアニン四重鎖の安定性の分子動力学計算による解析2018

    • Author(s)
      大山達也, 建石寿枝, 田中成典, 杉本直己
    • Journal Title

      日本核酸化学会誌

      Volume: 2 Pages: 3-10

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An anionic phthalocyanine decreases NRAS expression by breaking down its RNA G-quadruplex2018

    • Author(s)
      K. Kawauchi, W. Sugimoto, T. Yasui, K. Murata, K. Itoh, K. Takagi, T. Tsuruoka, K. Akamatsu, H. Tateishi-Karimata, N. Sugimoto, and D. Miyoshi
    • Journal Title

      Nat. Commum

      Volume: 9 Issue: 1 Pages: 2271-2271

    • DOI

      10.1038/s41467-018-04771-y

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Destabilization of DNA G-Quadruplexes by Chemical Environment Changes during Tumor Progression Facilitates Transcription2018

    • Author(s)
      Tateishi-Karimata Hisae、Kawauchi Keiko、Sugimoto Naoki
    • Journal Title

      Journal of the American Chemical Society

      Volume: 140 Issue: 2 Pages: 642-651

    • DOI

      10.1021/jacs.7b09449

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Drastic stability change of X-X mismatch in d(CXG) trinucleotide repeat disorders under molecular crowding condition2018

    • Author(s)
      Teng Ye、Pramanik Smritimoy、Tateishi-Karimata Hisae、Ohyama Tatsuya、Sugimoto Naoki
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 496 Issue: 2 Pages: 601-607

    • DOI

      10.1016/j.bbrc.2018.01.083

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Alkylating probes for the G-quadruplex structure and evaluation of the properties of the alkylated G-quadruplex DNA2018

    • Author(s)
      Sato Norihiro、Takahashi Shuntaro、Tateishi-Karimata Hisae、Hazemi Madoka E.、Chikuni Tomoko、Onizuka Kazumitsu、Sugimoto Naoki、Nagatsugi Fumi
    • Journal Title

      Org. Biomol. Chem.

      Volume: 16 Issue: 9 Pages: 1436-1441

    • DOI

      10.1039/c7ob03179c

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Topological impact of noncanonical DNA structures on Klenow fragment of DNA polymerase2017

    • Author(s)
      Takahashi Shuntaro、Brazier John A.、Sugimoto Naoki
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 114 Issue: 36 Pages: 9605-9610

    • DOI

      10.1073/pnas.1704258114

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] DNA G-wire formation using an artificial peptide is controlled by protease activity2017

    • Author(s)
      Usui, K., Okada, A., Sakashita, S., Shimooka, M., Tsuruoka, T., Nakano, S., Miyoshi, D., Mashima, T., Katahira, M., Hamada, Y.
    • Journal Title

      Molecules

      Volume: 22 Issue: 11 Pages: 1991-1991

    • DOI

      10.3390/molecules22111991

    • NAID

      120006501324

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 細胞環境化学模倣実験系におけるDNAの構造とその熱力学的安定性2017

    • Author(s)
      三好 大輔
    • Journal Title

      日本核酸化学会誌

      Volume: 1 Pages: 13-19

    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (77):高圧環境がDNA非二重らせん構造に与える影響2022

    • Author(s)
      大山 達也, 高橋 俊太郎, 建石 寿枝, 田中 成典, 杉本 直己
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (80) : Validation of the nearest-neighbor model for Watson-Crick RNA duplexes under molecular crowding condition2022

    • Author(s)
      S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (79) : Application of the nearest-neighbor model for the stability prediction of intramolecular i-motif DNAs2022

    • Author(s)
      P. Chilka, S. Takahashi, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (76) : Structure-based Derivatization of Berberine to Improve the Potency for Targeting RNA Structures2022

    • Author(s)
      S. Satpathi, T. Endoh, Y. Chen, S. Matsumoto, T. Ohyama, P. Podbevek, J. Plavec, K. Onizuka, F. Nagatsugi, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (73):Effect of G-quadruplex stability change on transcriptional repression in cancer cells2022

    • Author(s)
      H. Tateishi-Karimata, K. Kawauchi, T. Ohyama, H. Masaki, A. Natsume, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (74): Effect of DNA modifications on the transition between canonical and non-canonical DNA structures in CpG island2022

    • Author(s)
      S. Matsumoto, H. Tateishi-Karimata, T. Ohyama, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Structure-based Derivatization of Berberine to Improve the Potency for Targeting RNA Structures2022

    • Author(s)
      S. Satpathi, T. Endoh, Yutong Chen, S. Matsumoto, T. Ohyama, P. Podbevek, J. Plavec, K. Onizuka, F. Nagatsugi, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (75): Development of RNA-ligand pairs for multicolor RNA imaging in cells2022

    • Author(s)
      T. Endoh, Jia-Heng Tan, Shuo-Bin Chen, N. Sugimoto
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] オリゴ核酸とオリゴペプチドによる液液相分離現象の制御2022

    • Author(s)
      鶴田 充生, 取井 猛流, 小畠 一起, 川内 敬子, 三好 大輔
    • Organizer
      先端モデル動物支援プラットフォーム成果発表会
    • Related Report
      2021 Annual Research Report
  • [Presentation] グアニン四重らせん構造選択的な化合物スクリーニングおよび化合物の開発2022

    • Author(s)
      橋本佳樹, 取井 猛流, 藤田ひな, 川内 敬子, 三好 大輔
    • Organizer
      先端モデル動物支援プラットフォーム成果発表会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 核酸二次構造を標的としたドロップレットの分解2022

    • Author(s)
      鶴田 充生, 取井 猛流, 小畠 一起, 川内 敬子, 建石 寿枝, 杉本 直己, 三好 大輔
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] G4形成がん関連mRNAの液液相分離現象2022

    • Author(s)
      小路 諭, 赤松 由御, 鶴田 充生, 川内 敬子, 三好 大輔
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] グアニン四重らせん構造選択的化合物の開発に向けたスクリーニングシステムの構築2022

    • Author(s)
      橋本 佳樹, 取井 猛流, 藤田 ひな, 川内 敬子, 三好 大輔
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 生物学的液液相分離現象に対するジオール類の阻害メカニズムの解明2022

    • Author(s)
      高宮 渚, 鶴田 充生, 川内 敬子, 三好 大輔
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] グアニン四重らせん構造のフォールディング機構の速度論的解析2022

    • Author(s)
      中田 実紀, 三好 大輔
    • Organizer
      日本化学会第102回春季年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細胞夾雑模倣系の構築と細胞内活性分子設計指針の構築(4)2021

    • Author(s)
      杉本直己
    • Organizer
      分子夾雑の生命科学 第5回領域会議
    • Related Report
      2021 Annual Research Report
  • [Presentation] Mg2+イオンによるグアニン四重鎖DNAの構造ダイナミクス制御2021

    • Author(s)
      高橋俊太郎, 杉本直己
    • Organizer
      第70回高分子討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] トポロジー依存的なリガンド結合でグアニン四重鎖のDNA複製を制御する2021

    • Author(s)
      高橋俊太郎, 建石寿枝, 佐藤しのぶ, 竹中繁織, J. Plavec, 杉本直己
    • Organizer
      第15回バイオ関連化学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 神経変性疾患に係るリピートRNAとペプチドの相互作用解析2021

    • Author(s)
      建石寿枝, 大山達也, 田中成典, 杉本直己
    • Organizer
      第15回バイオ関連化学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 非天然塩基含有PNAによる三重らせん構造を介したmiRNAの成熟阻害2021

    • Author(s)
      遠藤玉樹, N. Brodyagin, D. Hnedzko, E. Rozners, 杉本直己
    • Organizer
      第15回バイオ関連化学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 高圧力を用いたRNAグアニン四重らせん構造の水和特性の解析2021

    • Author(s)
      高橋俊太郎, 松本咲, 杉本直己
    • Organizer
      第62回高圧討論会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Hydration parameters in nearest-neighbor model enables stability prediction for compositionally biased DNA duplexes in molecular crowding conditions2021

    • Author(s)
      S. Ghosh, S. Takahashi, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Application of nearest-neighbor model to the stability prediction of i-motif DNAs2021

    • Author(s)
      P. Chilka, S. Takahashi, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Changes in the atomic-level behavior of G-quadruplex under high pressure conditions2021

    • Author(s)
      T. Ohyama, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] G-quadruplex formation in cancer cells with different expression level of ion channels2021

    • Author(s)
      H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Triplex-forming peptide nucleic acid inhibits maturation of endogenous miRNA2021

    • Author(s)
      T. Endoh, N. Brodyagin, D. Hnedzko, E. Rozners, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Chemical modulation of DNA replication by topology- dependent ligand binding on guanine quadruplexes2021

    • Author(s)
      S. Takahashi, A. Kotar, H. Tateishi-Karimata, S. Bhowmik, Zi-Fu Wang, Ta-Chau Chang, S. Sato, S. Takenaka, J. Plavec, N. Sugimoto
    • Organizer
      第48回国際核酸化学シンポジウム
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effect of DNA modifications on the changes of DNA structure in CpG islands2021

    • Author(s)
      S. Matsumoto, H. Tateishi-Karimata, O. Tatsuya, N. Sugimoto
    • Organizer
      International Conference on Chemical and Environmental Sciences 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Roles of non-canonical DNA structures in cancer cells on mechanism of dimensional response genome2021

    • Author(s)
      H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      International Conference on Chemical and Environmental Sciences 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation transcription by DNA structures responsive chemical stimulus in cells2021

    • Author(s)
      H. Tateishi-Karimata, K. Kawauchi, N. Sugimoto
    • Organizer
      Pacifichem2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] オリゴ核酸を用いた神経変性疾患関連の液液相分離現象の制御2021

    • Author(s)
      鶴田 充生, 小畠 一起, 取井 猛流, 川内 敬子, 三好 大輔
    • Organizer
      日本核酸医薬学会 第6回年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細胞内核酸環境を模倣したグアニン四重らせん構造標的分子の新規スクリーニングシステム構築2021

    • Author(s)
      橋本佳樹, 三好大輔
    • Organizer
      日本ケミカルバイオロジー学会 第15回年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Droplet disassembly by G-quadruplex breakdown2021

    • Author(s)
      M. Tsuruta, T. Torii, K. Kohata, K. Kawauchi, D. Miyoshi
    • Organizer
      FIBER日本核酸化学会若手フォーラム
    • Related Report
      2021 Annual Research Report
  • [Presentation] A novel G-quadruplex-selective ligand screening system in the presence of excess DNA duplex2021

    • Author(s)
      Y. Hashimoto, D. Miyoshi
    • Organizer
      FIBER日本核酸化学会若手フォーラム
    • Related Report
      2021 Annual Research Report
  • [Presentation] Regulation of liquid-liquid phase separation by small molecules targeting RNA G-quadruplex2021

    • Author(s)
      N. Takamiya, M. Tsuruta, Y. Hashimoto K. Kawauchi, D. Miyoshi
    • Organizer
      FIBER日本核酸化学会若手フォーラム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 核酸の液液相分離現象に及ぼすエピジェネティック修飾効果の検討2021

    • Author(s)
      鶴田 充生, 三好 大輔
    • Organizer
      第15回バイオ関連化学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] G4形成がん関連mRNAの液液相分離現象2021

    • Author(s)
      小路 諭, 鶴田 充生, 川内 敬子, 三好 大輔
    • Organizer
      第11回CSJ化学フェスタ
    • Related Report
      2021 Annual Research Report
  • [Presentation] RNAG4を標的とした小分子によるLLPSの制御2021

    • Author(s)
      高宮 渚, 鶴田 充生, 橋本 佳樹, 川内 敬子, 三好 大輔
    • Organizer
      第11回CSJ化学フェスタ
    • Related Report
      2021 Annual Research Report
  • [Presentation] Liquid-liquid phase separation of G-quadruplexes derived from neurodegenerative disease RNAs2021

    • Author(s)
      D. Miyoshi, M. Tsuruta, K. Kohata, W. Sugimoto, T. Torii, H. Tateishi-Karimata, N. Sugimoto, K. Kawauchi
    • Organizer
      Pacifichem2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of a novel G4 ligand screening system with G4-specific fluorescent probe2021

    • Author(s)
      Y. Hashimoto, Y. Imagawa, N. Takamiya, K. Kawauchi, N. Sugimoto, D. Miyoshi
    • Organizer
      Pacifichem2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Liquid-liquid phase separation of RNA G-quadruplex promoted by RGG peptide2021

    • Author(s)
      M. Tsuruta, K. Kohata, T. Torii, W. Sugimoto, K. Kawauchi, D. Miyoshi
    • Organizer
      Pacifichem2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Liquid-liquid phase separation of nucleic acids depending on their structure2021

    • Author(s)
      D. Miyoshi
    • Organizer
      The 8th Japan-China Symposium on Nanomedicine
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Phase separation of G-quadruplex nucleic acids and arginine-rich peptides2021

    • Author(s)
      D. Miyoshi
    • Organizer
      European Materials Reasearch Society Spring Meeting 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 細胞内環境における核酸の四重らせん構造2021

    • Author(s)
      三好 大輔
    • Organizer
      第47回生体分子科学討論会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 核酸の非標準構造の水和と相分離2021

    • Author(s)
      三好 大輔
    • Organizer
      第70回高分子討論会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Structural alterations in ribosomal DNA under nucleolar stress2021

    • Author(s)
      K. Kawauchi, T. Torii, H. Tateishi-Karimata, N. Sugimoto, T. Nishikata, D. Miyoshi
    • Organizer
      The 44th Annual Meeting of Molecular Biology Society of Japan
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Hydration and Phase Separation of Nucleic Acids Depending on Their Structure2021

    • Author(s)
      D. Miyoshi, M. Tsuruta, T. Torii, N. Takamiya, S. Shoji, K. Kawauchi
    • Organizer
      Material Research Meeting 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 脱ワトソン・クリックの核酸化学(65): ベルベリンによるRNAバルジ構造の認識および安定化の微視的解析2021

    • Author(s)
      遠藤玉樹 , SATPATHI Sagar, 大山達也, PODBEVSEK Peter, PLAVEC Janez, 杉本直己
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学(66): 非天然DNAの複製反応に及ぼす分子クラウディングの影響2021

    • Author(s)
      高橋俊太郎, Herdwijn Piet, 杉本直己
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学(67): DNA四重らせん構造と転写変異に及ぼすがんの悪性進行に伴う細胞内環境変化の影響2021

    • Author(s)
      建石寿枝, 川内敬子, 大山達也, 杉本直己
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学(68): 老化における細胞内環境変化によるCpGアイランドのグアニン四重らせん構造のトポロジー制御2021

    • Author(s)
      松本咲, 大山達也, 杉本 直己
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] ワトソン・クリックの核酸化学(69): 神経変性疾患に関連するRNA四重鎖ジペプチドリピートの分子シミュレーションによる相互作用の解析2021

    • Author(s)
      大山達也, 建石寿枝, 田中成典, 杉本直己
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond Watson-Crick Double Helix (70): Prediction of DNA duplex stability having biased base composition under molecular crowding conditions2021

    • Author(s)
      Saptarshi Ghosh, Shuntaro Takahashi, Naoki Sugimoto
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Nucleic Acid Chemistry beyond Watson-Crick Double Helix (71): I-motif stability prediction under molecular crowding conditions2021

    • Author(s)
      Pallavi Chilka, Shuntaro Takahashi, Naoki Sugimoto
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (72): Prediction of RNA/DNA hybrid stability under a physiological condition and verification of advantage in CRISPR-Cas92021

    • Author(s)
      Dipanwita Banerjee, Hisae Tateishi-Karimata, Tatsuya Ohyama, Marko Trajkovski, Maria Toplishek, Janez Plavec, Naoki Sugimoto
    • Organizer
      日本化学会第101回春季年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] フラボノイドによるi-motif DNAの配列選択的な構造変化2020

    • Author(s)
      高橋俊太郎, BHOWMIK Sudipta, 杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] 神経変性疾患に関わるリピートRNAによる相分離機構の解析2020

    • Author(s)
      建石寿枝, Ye Teng, 大山達也, 田中成典, 杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] バルジを含むRNA二重鎖と天然アルカロイドとの相互作用解析2020

    • Author(s)
      遠藤 玉樹, SATPATHI Sagar, PODBEVSEK Peter, PLAVEC Janez, 杉本 直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] 異なるGカルテット数とループ長を有するRNAグアニン四重らせんの安定性への分子クラウディングの効果2020

    • Author(s)
      松本咲, 建石寿枝, 高橋俊太郎, 大山達也, 杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] Stability prediction of DNA duplexes available under diverse molecular crowding conditions2020

    • Author(s)
      GHOSH Saptarshi, 高橋俊太郎, 大山達也, 遠藤玉樹, 建石寿枝, 杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] Development of the prediction method for stability of RNA/DNA hybrids under a physiological condition2020

    • Author(s)
      BANERJEE Dipanwita, 建石寿枝, 大山達也, GHOSH Saptarshi, 遠藤玉樹, 高橋俊太郎, 杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] Empirical rule of i-motif stability regulated by different molecular crowding conditions2020

    • Author(s)
      PALLAVI Chilka, 高橋俊太郎,杉本直己
    • Organizer
      第14回バイオ関連化学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] 局所的な細胞内環境における核酸構造の安定性を探る2020

    • Author(s)
      高橋俊太郎, GHOSH Saptarshi, 杉本直己
    • Organizer
      第69回高分子討論会
    • Related Report
      2020 Annual Research Report
  • [Presentation] cMyc遺伝子のグアニン四重らせんに対する圧力効果とその生物学的意義2020

    • Author(s)
      高橋俊太郎, 杉本直己
    • Organizer
      第61回高圧討論会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (57): Parameters for prediction of DNA duplex stabilities under the crowding conditions2020

    • Author(s)
      S. Ghosh, S.Takahashi, T. Ohyama, T. Endoh, H. Tateishi-Karimata, N.Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (58): The effect of molecular crowding on the stability of RNA G-quadruplexes with various number of quartets and loops2020

    • Author(s)
      S. Matsumoto, H. Tateishi-Karimata, S. Takahashi, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (59): Prediction method for the stability of RNA/DNA hybrid duplex under a physiological condition2020

    • Author(s)
      D. Banerjee, H. Tateishi-Karimata, T. Ohyama, M. Tranjkovski, M. Toplishek, S. Takahashi, T. Endoh, J. Plavec, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (60): Interaction analyses between natural alkaloids and RNAs with different structure motifs2020

    • Author(s)
      T. Endoh, S. Satpathi, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (61): Effect of neighboring base pairs of cytosine bulge on berberine Induced RNA stabilization2020

    • Author(s)
      S. Satpathi, T. Endoh, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (62): Transformation of selective i-motif DNAs induced by flavonoid2020

    • Author(s)
      S. Takahashi, S. Bhowmic, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (63):分子シュミレーションによるGGGGCCリピートのRNA四重鎖とジペプチドリピートの集積メカニズムの解析2020

    • Author(s)
      大山達也, 建石寿枝, 田中成典, 杉本直己
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (64): Effects of malignant alteration in cancer cells on the DNA structures and transcript mutations2020

    • Author(s)
      H. Tateishi-Karimata, K. Kawauchi, T. Ohyama, N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Chemistry of non-double helix nucleic acids in molecular crowding2020

    • Author(s)
      N. Sugimoto
    • Organizer
      日本化学会第100回春季年会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 神経変性疾患に関与するRNA/ペプチドによるPhase separationの機構解析2019

    • Author(s)
      建石寿枝, Ye Teng, 大山達也, 田中成典, 杉本直己
    • Organizer
      第2回LLPS(液液相分離)研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Functions of Non-canonical Nucleic Acids (2)2019

    • Author(s)
      N. Sugimoto
    • Organizer
      International Workshop“Trends in Nucleic Acid (TINA) 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 細胞夾雑模倣系の構築と細胞内活性分子設計指針の構築(3)2019

    • Author(s)
      杉本直己
    • Organizer
      分子夾雑の生命化学 第3回領域会議
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] DNA四重らせん構造はがんの悪性化を制御しているのか2019

    • Author(s)
      建石寿枝, 杉本直己
    • Organizer
      第22回生命化学研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] The Watson-Crick World Is Not Enough2019

    • Author(s)
      N. Sugimoto
    • Organizer
      Gordon Research Conference (Nucleosides, Nucleotides and Oligonucleotides)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] To B or Not to B : The Watson-Crick world is not enough2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The Commemorative International Symposium of Nucleic Acid Chemistry (CISNAC2019)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Nucleic Acids Chemistry under the Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      第29回バイオ・高分子シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] 神経変性疾患に関わるRNAリピート配列とペプチドの相互作用解析2019

    • Author(s)
      建石 寿枝, Ye Teng, 大山 達也,田中 成典, 杉本 直己
    • Organizer
      第13回バイオ関連化学シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] 生理活性分子に結合する天然RNAの網羅的スクリーニング2019

    • Author(s)
      遠藤玉樹、杉本直己
    • Organizer
      第13回バイオ関連化学シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] Adventures of Guanine-quadruplex in Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The 7th International Meeting on Quadruplex Nucleic Acids
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Role for G-quadruplexes of Nucleic Acids During Tumor Progression2019

    • Author(s)
      H. Tateishi-Karimata and N. Sugimoto
    • Organizer
      10th RSC-CSJ Joint Symposium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 神経変性疾患に関わるRNA・ペプチドの細胞内での相互作用解析2019

    • Author(s)
      建石寿枝, 杉本直己
    • Organizer
      大阪大学蛋白研セミナー/第3回LLPS研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Effects of malignant alteration in cancer cells on the DNA G-quadruplex formation and transcript mutations2019

    • Author(s)
      H. Tateishi-Karimata, K. Kawauchi and N. Sugimoto
    • Organizer
      International Conference on Genomes and AI: From Packing to Regulation
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分子夾雑で遺伝子発現を制御する2019

    • Author(s)
      建石寿枝
    • Organizer
      第9会CSJ化学フェスタ文科省科研費新学術領域研究「分子夾雑の生命化学」特別企画:細胞の中身を化学する!
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Adventures of Nucleic Acids in the Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      Solvation Science Meets High Pressure Bioscience RESOLV ? 10th IMBP ? DFG FOR 1979
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] “To B or not to B” in Nucleic Acids Chemistry (3)2019

    • Author(s)
      N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids "ANNA2019"
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Effect of RNA structures on RNA and RNA/peptide accumulation in repeat-expansion disorders2019

    • Author(s)
      H. Tateihsi-Karimata and N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids "ANNA2019"
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Conformational Dynamics of the RNA G-Quadruplex and its Effect on Gene Expressions2019

    • Author(s)
      T. Endoh and N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids "ANNA2019"
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA グアニン四重鎖に結合する蛍光性リカ?ント?の高圧力による発光 増強効果2019

    • Author(s)
      高橋俊太郎, Bhowmik Sudipta, 杉本直己
    • Organizer
      第60回高圧討論会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Prediction method for DNA duplex stability in molecular crowding conditions2019

    • Author(s)
      S. Ghosh, S. Takahashi, T. Ohyama, T. Endoh, H. Kateishi-Karimata, N. Sugimoto
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Topology-based DNA quadruplex sensors for characterization of intracellular crowding environments2019

    • Author(s)
      S. Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, N. Sugimoto
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Screening of transcriptomic RNAs that interact with thioflavin T derivative2019

    • Author(s)
      T. Endoh, M. Kuwahara, Y. Kataoka, N. Sugimoto
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effect of RNA topology on phase separation of peptides and proteins in neurodegenerative diseases2019

    • Author(s)
      H. Tateishi-Karimata, Y. Teng, T. Ohyama, S. Tanaka, E. Chatani, N. Sugimoto
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of new prediction parameters for RNA/DNA hybrid duplex stability under a physiological buffer condition2019

    • Author(s)
      D. Banerjee, H. Tateishi-Karimata, T. Ohyama, T. Endoh, S. Takahashi, N. Sugimoto
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Phase separation of RNA G-quadruplexes induced bycationic peptides2019

    • Author(s)
      K. Kohata, W. Sugimoto, K. Kawauchi, N. Sugimoto, D. Miyoshi
    • Organizer
      第46回国際核酸化学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Adventure on the World of Noncanonical Nucleic Acids2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The Symposium on Nucleic Acid Chemistry
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Sequence Optimization to Conditionally Regulate Functional RNAs for Biotechnological Applications2019

    • Author(s)
      T. Endoh, N. Sugimoto
    • Organizer
      13th Anniversary International Symposium on Nanomedicine (ISNM2019)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分子夾雑環境に応答したDNAの構造変化が遺伝子発現機構に及ぼす影響を定量的に解析する2019

    • Author(s)
      建石寿枝, 杉本直己
    • Organizer
      新学術領域「分子夾雑の生命化学」第2回関西地区シンポジウム, 第1回 CIBIC ワークショップ
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Molecular Crowding Regulates RNA Phase Separations in Repeat Expansion Disorders2019

    • Author(s)
      Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
    • Organizer
      Gordon Research Conference(RNA Nanotechnology)
    • Related Report
      2018 Annual Research Report
  • [Presentation] Functions of Nucleic Acids under Molecular Crowding Conditions2019

    • Author(s)
      N. Sugimto
    • Organizer
      The Lecture of Institute of Biophysics Czech Academy of Sciences
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Elucidation for mechanism of diseases caused by non-canonical structures of DNA and regulation for DNA function2019

    • Author(s)
      H. Tateishi-Karimata
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (48) :Imaging of crowding in cells by using guanine-quadruplex DNA2019

    • Author(s)
      S.Takahashi, J. Yamamoto, A. Kitamura, M. Kinjo, and N. Sugimoto
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (49): Validation of the nearest-neighbor model for self-complementary DNA duplex under molecular crowding2019

    • Author(s)
      S. Ghosh, S.Takahashi, T. Endoh, H. Tateishi-Karimata, and N. Sugimoto
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix(50):Phase separation of RNA/peptides in neurodegenerative diseases is promoted by chemical environment changes in cell2019

    • Author(s)
      H. Tateishi-Karimata, Y. TENG, T.Ohyama, and N. Sugimoto
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (51): DNAとクラウディング分子の相互作用の分子動力学計算と電子状態計算による定量的解析2019

    • Author(s)
      大山達也, 建石寿枝, 田中成典, 杉本直己
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (52) : Optimization of RNA conformational switch using RNA-capturing microsphere particle (R-CAMP)2019

    • Author(s)
      T. Endoh and N. Sugimoto
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (53): RNAグアニン四重らせん構造とカチオン性ペプチドによる特異的相分離現象2019

    • Author(s)
      小畠一起, 川内敬子, 杉本直己, 三好大輔
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (54):グアニン四重らせんおよびi-モチーフ選択的リガンドの開発2019

    • Author(s)
      今川佳樹, 小畠一起, 杉本直己, 三好大輔
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (55): DNA四重らせん選択的リガンドのワンポットスクリーニング2019

    • Author(s)
      長野香穂, 衣笠紫野, 萩原伸也, 佐藤綾人, 川内 敬子, 杉本直己, 三好大輔
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学(56): DNAの構造安定性に及ぼすメチル化と分子クラウディングの複合効果2019

    • Author(s)
      杉谷優衣, 造住有輝, 杉本直己, 三好大輔
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Adventures of Nucleic Acids in Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department Seminar of Sun Yat-sen University
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] RNAs in Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The Seminar of Hong Kong RNA Club
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Adventures of Nucleic Acids in Molecular Crowding World2019

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department Seminar of City University of Hong Kong
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 分子夾雑環境における核酸の定量解析:核酸四重らせん構造に対する分子標的型光線力学療法の構築に向けて2019

    • Author(s)
      三好 大輔
    • Organizer
      日本化学会第99回春季年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Rational design and development of photodynamic therapy targeting NRAS mRNA G-quadruplex2019

    • Author(s)
      三好 大輔
    • Organizer
      神戸大学工学部セミナー
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Functions of Non-canonical Nucleic Acids2018

    • Author(s)
      N. Sugimoto
    • Organizer
      International workshop“Trends in Nucleic Acid (TINA) 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The world of non-canonical nucleic acids: To B or not to B2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The seminer of “The role of non-canonical structure of nucleic acids”
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 細胞夾雑模倣系の構築と細胞内活性分子設計指針の構築2018

    • Author(s)
      杉本直己
    • Organizer
      分子夾雑の生命化学 第二回領域会議
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry Beyond the Watson-Crick Double Helix:“To B or not to B”2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The Departmental seminar of College of Pharmacy
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Nucleic Acids Chemistry Beyond the Watson-Crick Double Helix:“To B or not to B”2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department seminar
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Improved Efficiency of mRNA Sensing System by a Hydrated Ionic Liquid2018

    • Author(s)
      H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      Gordon Research Conference(Bioanalytical Sensors)
    • Related Report
      2018 Annual Research Report
  • [Presentation] 核酸物理化学と核酸医薬の設計指針2018

    • Author(s)
      杉本直己
    • Organizer
      日本核酸医薬学会第4回年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] がん細胞の悪性化に及ぼすDNA四重鎖構造の解離と転写変異の影響2018

    • Author(s)
      建石寿枝, 川内敬子, 杉本直己
    • Organizer
      日本核酸医薬学会第4回年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 分子クラウディング環境下におけるFMNリボスイッチ由来のアプタマードメインの分子挙動2018

    • Author(s)
      遠藤玉樹, Rode Anbadas, 杉本直己
    • Organizer
      第20回日本RNA学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Stability and Function of Noncanonical Nucleic Acids2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The seminar of Institute of Chemical Biology and Fundamental Medicine
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Nucleic Acids World under Molecular Crowding2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The 5th Asian Chemical Biology Conference (ACBC-5)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Noncanonical world of nucleic acids under molecular crowding:To B or not to B2018

    • Author(s)
      N. Sugimoto
    • Organizer
      XXIII International Roundtable of NucleosidesNucleotides and Nucleic Acids (IRT2018)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] カリウムチャネルはがん遺伝子の転写活性をDNA四重鎖の形成によって制御しているのか?2018

    • Author(s)
      建石寿枝, 川内敬子, 大山達也, 杉本直己
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] 植物由来の天然代謝産物と核酸構造との相互作用解析2018

    • Author(s)
      遠藤玉樹, 杉本直己
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] グアニン四重鎖リガンドのトポロジー依存的結合様式によるDNA複製反応の制御2018

    • Author(s)
      高橋俊太郎, Bhowmik Sudipta, Chang Ta-Cha, 佐藤しのぶ, 竹中繁織, 杉本直己
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] Gelation of RNA repeats in ALS/FTD is promoted in crowding conditions2018

    • Author(s)
      Teng Ye, 建石寿枝, 杉本直己
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] ポリエチレングリコールにより誘起される分子クラウディング環境がDNA四重鎖の構造安定性に与える影響の分子シミュレーション解析2018

    • Author(s)
      大山達也, 建石寿枝, 田中成典, 杉本直己
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] リガンド複合型核酸マテリアルによる塩基損傷を受けたグアニン四重鎖の機能回復2018

    • Author(s)
      高橋俊太郎, Kim Byeang Hyean, Stetsenko Dmitry, Plavec Janez,杉本直己
    • Organizer
      第67回高分子討論会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Beyond the Watson-Crick Double Helix:Make New History of Nucleic Acids (6)2018

    • Author(s)
      N. Sugimoto
    • Organizer
      Asia 3 Roundtable on Nucleic Acids 2018 (A3RONA2018)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Analysis of structural dynamics of RNA aptamer using high pressure2018

    • Author(s)
      S. Takahashi, T. Endoh, A. B. Rode, N. Sugimoto
    • Organizer
      The 10th International Conference on High Pressure Bioscience and Biotechnology (HPBB2018)
    • Related Report
      2018 Annual Research Report
  • [Presentation] Noncanonical world of nucleic acids under molecular crowding and high pressure2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The 10th International Conference on High Pressure Bioscience and Biotechnology (HPBB2018)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Noncanonical world of nucleic acids under molecular crowding2018

    • Author(s)
      N. Suigmoto
    • Organizer
      The seminar of the department f Pharmacy University of Naples "Federico II"
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] To B or not to B” in Nucleic Acids Chemistry (2)2018

    • Author(s)
      N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids "ANNA2018"
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Effect of noncanonical DNA structures on transcription2018

    • Author(s)
      N.Sugimto
    • Organizer
      The Third A3 Roundtable Meeting on Chemical Probe Research Hub
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Optimization of junction sequence between two aptamers for constructing signaling aptamer by using RNA library on microspheres2018

    • Author(s)
      T. Endoh, N. Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Investigation for effects of polyethylene glycols on DNA structure and stability using molecular dynamics simulations2018

    • Author(s)
      T. Ohyama, H.Tateishi-Karimata, S. Tanaka, and N. Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Phase separation of repeated RNA with amyloid-like protein in neurodegenerative diseases is promoted by RNA G-quadruplexes2018

    • Author(s)
      Y. Teng, H. Tateishi-Karimata, and N. Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effect of G-quadruplex stability and structure in the template DNA on transcript mutations in normal and cancer cells2018

    • Author(s)
      H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structural Perspectives of the DNA binding properties of Ruthenium Polypyridyl Complexes2018

    • Author(s)
      K. McQuaid, J. Hall, H. Abell1, S. Takahashi, N. Sugimoto, D. Allan, D. Cardin, J. Brazier, and C. Cardin
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Transformation of selective i-motif DNAs into hairpin-like structures induced by a flavonoid compound2018

    • Author(s)
      S. Takahashi, S. Bhowmik, S. Ghosh, and N. Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effects of molecular crowding on nearest-neighbor rules for Watson-Crick self-complementary DNA duplexes2018

    • Author(s)
      S. Ghosh, S. Takahashi, T. Endoh, H. Tateishi-Karimata, S. Hazra, and N, Sugimoto
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Roles of Noncanonical Nucleic Acids on Gene Expressions2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The 2nd International Symposium on “Functional Nucleic Acids: From Laboratory to Targeted Molecular Therapy”
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Functions “of Nucleic Acids with Non-canonical Structures:To B or not to B”2018

    • Author(s)
      N. Sugimoto
    • Organizer
      KONAN RESEARCH SUMMIT
    • Related Report
      2018 Annual Research Report
  • [Presentation] THE WORLD OF NON-CANONICAL NUCLEIC ACIDS2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The 9th Asian Biological Inorganic Chemistry “AsBIC9
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Crowding Effect on Functions of Nucleic Acids:2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department seminar, Korea Institute of Science and Technology (KIST)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Crowding Effect on Functions of Nucleic Acids:2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department seminar, Seoul National University
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Crowding Effect on Functions of Nucleic Acids:2018

    • Author(s)
      N. Sugimoto
    • Organizer
      The Department seminar, Sungkyunkwan University School of Medicine
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分子夾 雑環境における核酸構造リガンドの開発とその展開2018

    • Author(s)
      三好 大輔
    • Organizer
      新学術領域「分子夾雑の生命化学」水無月セミナー、蛋白質凝集と核酸
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 分子夾雑環境下における非二重らせん構造が遺伝子発現に及ぼす影響2018

    • Author(s)
      建石 寿枝
    • Organizer
      新学術領域「分子夾雑の生命化学」水無月セミナー、蛋白質凝集と核酸
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 分子夾雑効果の定量解析に基づいた機能分子の開発2018

    • Author(s)
      三好 大輔
    • Organizer
      日本学術振興会 分子ナノテクノロジー第174委員会 第62回研究会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Structure and stability of nucleic acids under molecular crowding conditions with cationic polymers2018

    • Author(s)
      Daisuke Miyoshi
    • Organizer
      14th Japan; Belgium Symposium on Polymer Science
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分子夾雑効果の定量解析に基づいた機能分子の開発2018

    • Author(s)
      三好 大輔、川内 敬子
    • Organizer
      名古屋大学医学部脳外科セミナー
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 細胞の分子夾雑環境での核酸構造の定量解析とその応用2018

    • Author(s)
      三好 大輔
    • Organizer
      日本分析化学会第67年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] DNA I-motif 構造形成に伴う蛍光発光を用いた I-motif の新規検出法2018

    • Author(s)
      小畠 一起、杉本 直己、三好 大輔
    • Organizer
      第12回バイオ関連化学シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] Identification of DNA G-quadruplex and i-motif binding ligands by a fluorescent screening system2018

    • Author(s)
      Y. Imagawa, K. Kohata, N. Sugimoto, D. Miyoshi
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Phase separation of nucleic acids indced by cationic peptides and molecular crowding conditions2018

    • Author(s)
      K. Kohata, N. Sugimoto, D. Miyoshi
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Increments in the thermal stability of G-quadruplexes with a long loop using bulky cations2018

    • Author(s)
      K. Tanabe, M. Horita, S. Morita, D. Miyoshi, N. Sugimoto, S. Nakano
    • Organizer
      第45回国際核酸化学シンポジウム
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] がん関連mRNAが形成する四重らせん構造に対する分子標的型光線力学療法2018

    • Author(s)
      三好 大輔
    • Organizer
      日経バイオテク プロフェッショナルセミナー 低分子薬で核酸を標的に
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Molecularly-targeted photodynamic therapy for NRAS mRNA G-quadruplex2018

    • Author(s)
      D. Miyoshi, K. Kawauchi, W. Sugimoto, K. Itoh, T. Tsuruoka, K. Akamatsu, H. Tateishi-Karimata, N. Sugimoto,
    • Organizer
      12th International Symposium on Nanomedicine (ISNM2018)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 核酸構造安定性に及ぼす細胞の分子クラウディング効果の定量解析とその展開2018

    • Author(s)
      三好 大輔
    • Organizer
      東京大学大学院総合文化研究科 第192回 生命環境科学系セミナー
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Functions of Non-canonical Nucleic Acids2018

    • Author(s)
      N.Sugimoto
    • Organizer
      International workshop“Trends in Nucleic Acid (TINA) 2018”
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Topological impact of non-canonical DNA structures on the replication2018

    • Author(s)
      S. Takahashi, N. Sugimoto
    • Organizer
      Gordon Research Conference DNA Damage, Mutation and Cancer
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (38): Effects of malignant alteration in cancer cells on the G-quadruplex formation and transcript mutations2018

    • Author(s)
      H. Tateishi-Karimata, K. Kawaguchi, T, Ohyama, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 四重らせん構造による新規の転写制御機構:がん進行過程におけるノンコーディングDNAの役割2018

    • Author(s)
      建石寿枝
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (37): The formation of RNA foci in repeat expansion disorders is promoted in molecular crowding conditions2018

    • Author(s)
      Y. Teng, H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (39) : Control of replication of G-quadruplex containing oxidative lesion2018

    • Author(s)
      S. Takahashi, P. Podbevsek, J. Plavec, B. H. Kim, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (40): Crowding Regulates the Riboswitch Aptamer-Ligand Recognition Mechanism in Bacterial Pathogenesis Mimic Condition2018

    • Author(s)
      A.B. Rode, T. Endoh, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (41): Construction of RNA display from DNAs immobilized on microsphere and its application for aptamer optimization2018

    • Author(s)
      T. Endoh, T. Ohyama, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nucleic Acids Chemistry beyond the Watson-Crick Double Helix (42): Quantitative analysis for effects of molecular network by crowding agents on the G-quadruplex stability2018

    • Author(s)
      T. Ohyama, H. Tateishi-Karimata, N. Sugimoto
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (43): G-quadruplex構造を安定化させるN-メチル化クロリン類の合成2018

    • Author(s)
      永野泰伸, 遠藤玉樹, 小笠原伸, 杉本直己, 民秋 均
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (44): DNAの構造安定性に及ぼすヒストン模倣高分子と分子クラウディング環境の複合効果2018

    • Author(s)
      造住有輝, 宮田貴史, 嶋田直彦, 杉本直己, 丸山厚, 三好大輔
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (45): ZnAPCによるグアニン四重らせん構造の選択的蛍光検出2018

    • Author(s)
      今川佳樹, 杉本直己, 三好大輔
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (46): Thioflavin Tを用いたDNA I-motifの配列特異的検出2018

    • Author(s)
      小畠一起, 赤山詩織, 杉本直己, 三好大輔
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱ワトソン・クリックの核酸化学 (47): RNA四重らせん構造リガンドを用いた分子標的型光線力学療法の構築2018

    • Author(s)
      高木一樹, 安井貴俊, 伊藤功彦, 杉本渉, 川内敬子, 杉本直己, 三好大輔
    • Organizer
      日本化学会第98回春季年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] What is the canonical structure of nucleic acids in cells?2018

    • Author(s)
      Daisuke Miyoshi
    • Organizer
      Institute Seminar, National Institute of Technology, Nagaland
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA and RNA G-quadruplexes under molecular crowding conditions2018

    • Author(s)
      Daisuke Miyoshi
    • Organizer
      IGIB seminar, Institute of Genomics & Integrative Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA and RNA G-quadruplexes: structure, function, and ligand under cell mimicking molecular crowding conditions2018

    • Author(s)
      Daisuke Miyoshi
    • Organizer
      International Conference on Current Trends in Materials Science and Engineering (CTMSE 2018)
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Effect of chemical environment change by malignant alteration in cancer cells on transcript productions from G-rich template DNAs2017

    • Author(s)
      H. Tateishi-Karimata, K. Kawauchi, T. Ohyama, and N. Sugimoto
    • Organizer
      The 2nd International Symposium on Biofunctional Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Non-canonical DNA structures control DNA replication by topology-dependent manner2017

    • Author(s)
      S. Takahashi, J. A. Brazier, and N. Sugimoto
    • Organizer
      The 2nd International Symposium on Biofunctional Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Understanding of intracellular multimolecular crowding from interaction between RNA and small molecule2017

    • Author(s)
      T. Endoh. A. B. Rode, and N. Sugimoto
    • Organizer
      The 2nd International Symposium on Biofunctional Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 水和イオン液体中で機能するDNAセンサー2017

    • Author(s)
      建石寿枝, 杉本直己
    • Organizer
      第8回イオン液体討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Effect of noncanonical DNA structures on DNA polymerase2017

    • Author(s)
      N.Sugimoto
    • Organizer
      The Second A3 Roundtable Meeting on Asia Chemical Probe Research Hub
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Topological effect of non-canonical DNA structures on DNA replication2017

    • Author(s)
      S.Takahashi, J.A.Brazier, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Regulation of DNA structure and stability by combined effects of histone-mimicking polymers and osmolytes”2017

    • Author(s)
      Y.Zouzumi, N.Yamaguchi, N.Shimada, N.Sugimoto, A.Maruyama, D.Miyoshi
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The stabilization mechanism of cyclic naphthalene diimide binding with various topology of G-quadruplexes2017

    • Author(s)
      T.Ohyama, H.Tateishi-Karimata, S.Takahashi, S.Sato, S.Tanaka, S.Takenaka, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Relationship between malignant alteration in cancer cells and the transcript mutations by G-quadruplex formations in the template DNA2017

    • Author(s)
      H.Tateishi-Karimata, K.Kawauchi, T.Ohyama, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Investigation of RNA G-quadruplexes Formation in Normal and Cancer Cells Using Bicistronic IRES Vector2017

    • Author(s)
      A.B. Rode, T.Endoh, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Does molecular crowding regulate C9orf72-related ALS/FTD diseases by RNA foci formation?2017

    • Author(s)
      Y.Teng, H.Tateishi-Karimata, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A fluorescence based screening system for ligands targeting non-canonical DNA structures2017

    • Author(s)
      J.Jana, T.Endoh, Y.Kataoka, S.Sato, S.Takenaka, M.Kuwahara, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] N-Methyl modification transforms a chlorophyll derivative into a G-quadruplex stabilizing ligand2017

    • Author(s)
      T.Endoh, Y.Nagano, S.Ogasawara, H.Tamiaki, N.Sugimoto
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Specific light-up system based on signal amplification by ternary initiation complexes2017

    • Author(s)
      H.Fujita, Y.Kataoka, Y.Nakajima, M.Yamada, N.Sugimoto, M.Kuwahara
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Evaluation of interactions between DNA G-quadrplex and small biomolecules selected by high-throuput screenin2017

    • Author(s)
      K.Tanabe, D.Miyoshi, N.Sugimoto, S.Nakano
    • Organizer
      第44回国際核酸化学シンポジウム
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 核酸化学における“To B or not to B”2017

    • Author(s)
      杉本直己
    • Organizer
      平成29年度生命融合科学教育学部シンポジウム“ライフサイエンスを開拓先導する分子科学”
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ヘミン - グアニン四重鎖 DNA からなる DNAzyme の反応解析における高圧力の活用2017

    • Author(s)
      高橋 俊太郎, 杉本 直己
    • Organizer
      第58回高圧討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 核酸化学における“To B or not to B"2017

    • Author(s)
      杉本直己
    • Organizer
      第15回公開セミナー(Chemical Biology)
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Cell nucleus-mimicking system with synthetic cationic polymers2017

    • Author(s)
      Daisuke Miyoshi
    • Organizer
      1st Minisymposium on Material Biology
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] “To B or not to B” in Nucleic Acids Chemistry2017

    • Author(s)
      N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Transcriptional regulation by DNA structural changes responsive chemical environments in cells during tumor progression2017

    • Author(s)
      H. Tateishi-Kartimata, N. Sugimoto
    • Organizer
      Advances in Noncanonical Nucleic Acids 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Non-canonical DNA and RNA in Gene Expressions, Pohang University of Science and Technology2017

    • Author(s)
      N. Sugimoto
    • Organizer
      Mini-Symposium on Nucleic Acid Chemistry
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Function of Non-canonical Nucleic Acids2017

    • Author(s)
      N. Sugimoto
    • Organizer
      2017 SKKU International Symposium on Molecular Medicine Current Progress in Nucleic Acid Research and Application
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA and RNA G-quadruplexes: Structure, Stability, Function, and Ligand under Cell-mimicking Molecular Crowding Conditions2017

    • Author(s)
      Daisuke Miyoshi, Yu-ki Zouzumi, Yoshiki Imagawa, Wataru Sugimoto, Takatoshi Yasui, and Keiko Kawauchi
    • Organizer
      A3 Foresight 9th Meeting
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 塩基損傷を受けたグアニン四重鎖DNAの検出と構造制御を誘導するリガンド複合型核酸マテリアルの創製2017

    • Author(s)
      高橋 俊太郎, Kim Byeang Hyean, 杉本 直己
    • Organizer
      第66回高分子討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Beyond the Watson-Crick Double Helix: Make New History of Nucleic Acids (5)2017

    • Author(s)
      N. Sugimoto
    • Organizer
      Asia 3 Roundtable on Nucleic Acids 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 細胞内模倣環境における核酸と蛋白質の非特異的な相互作用の評価2017

    • Author(s)
      堀田 政夫, 森本 隆太, 中井 大樹, 杉本 直己, 中野 修一
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] ハイスループット解析による核酸と生体低分子の相互作用評価2017

    • Author(s)
      田辺 和也, 三好 大輔, 杉本 直己, 中野 修一
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒストン模倣高分子のエピジェネティック修飾による DNA との結合親和性への影響2017

    • Author(s)
      造住 有輝, 山口 野乃花, 嶋田 直彦, 杉本 直己, 丸山 厚, 三好 大輔
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 癌関連遺伝子群の mRNA 上における転写反応と共役した二次構造と四重鎖構造の競合2017

    • Author(s)
      遠藤 玉樹, RODE Ambadas, 杉本 直己
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 酸化損傷したクグアニン四重鎖の検出と四重鎖形成制御2017

    • Author(s)
      高橋 俊太郎, Kim Byeang Hyean, Podbevsek Peter, Plavec Janez, 杉本 直己
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] がん進行過程におけるノンコーディング領域のDNA四重らせん構造による転写制御機構2017

    • Author(s)
      建石寿枝、川内敬子、大山達也, 杉本 直己
    • Organizer
      第11回バイオ関連化学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Molecular Crowding Effect on the Stability, Topology and Function of Nucleic Acids:To B or not to B2017

    • Author(s)
      N. Sugimoto
    • Organizer
      The 7th Cambridge Symposium on Nucleic Acids Chemistry and Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞の分子クラウディング環境における核酸の四重らせん構造とそれを標的にした機能性分子の開発2017

    • Author(s)
      三好大輔
    • Organizer
      49th Seminer, Japanese Association of Scientists in Singapore
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Nanobioengineering of Non-canonical DNA and RNA2017

    • Author(s)
      N. Sugimoto
    • Organizer
      The 6th International Conference on DNA Nanotechnology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] "Non-canonical Nucleic Acids"2017

    • Author(s)
      N. Sugimoto
    • Organizer
      DNA assembly and nanotechnology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of Gene Expressions by Non-canonical DNA and RNA2017

    • Author(s)
      N. Sugimoto
    • Organizer
      First Conference on Biomotors, Virus Assembly, and Nanobiotechnology Applications
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 核酸の高次構造を標的にする機能性分子の医療展開2017

    • Author(s)
      三好大輔
    • Organizer
      神戸医療産業都市クラスター交流会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Replication control by topologies of non-canonical DNA structures2017

    • Author(s)
      S. Takahashi, N. Sugimoto
    • Organizer
      FIBER国際核酸サミット2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] テトラエチレングリコール修飾核酸を活用した新しい逆転写制御法の開発2017

    • Author(s)
      建石 寿枝、大山 達也, 村岡 貴博, Peter Podbevsek、 Adam M. Wawro、田中 成典, 金原 数, Janez Plavec, 杉本 直己
    • Organizer
      日本核酸医薬学会第3回年会
    • Related Report
      2017 Annual Research Report
  • [Book] Chemistry and Biology of Non-canonical Nucleic Acids2021

    • Author(s)
      N. Sugimoto
    • Total Pages
      288
    • Publisher
      WILEY
    • ISBN
      3527817867
    • Related Report
      2021 Annual Research Report
  • [Book] 核酸科学ハンドブック2020

    • Author(s)
      杉本直己
    • Total Pages
      565
    • Publisher
      講談社
    • ISBN
      9784065207864
    • Related Report
      2020 Annual Research Report
  • [Book] 現代化学2019

    • Author(s)
      高橋俊太郎, 杉本直己
    • Publisher
      化学同人
    • Related Report
      2018 Annual Research Report
  • [Book] CSJカレントレビュー「生命機能に迫る分子化学」2018

    • Author(s)
      建石寿枝、杉本直己
    • Publisher
      化学同人
    • Related Report
      2018 Annual Research Report
  • [Book] Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids2018

    • Author(s)
      H. Tateishi-Karimata, N. Sugimoto
    • Publisher
      Biophysical Reviews (SpringerLink)
    • Related Report
      2018 Annual Research Report
  • [Remarks] 甲南大学先端生命工学研究所ホームページ

    • URL

      http://www.konan-fiber.jp/indexb/

    • Related Report
      2021 Annual Research Report
  • [Remarks] 甲南大学先端生命工学研究所 ホームページ

    • URL

      http://www.konan-fiber.jp/index.php

    • Related Report
      2020 Annual Research Report
  • [Remarks] 甲南大学先端生命工学研究所

    • URL

      http://www.konan-fiber.jp/

    • Related Report
      2019 Annual Research Report
  • [Remarks] 甲南大学先端生命工学研究所

    • URL

      http://www.konan-fiber.jp/index.php

    • Related Report
      2018 Annual Research Report
  • [Remarks] 分子夾雑の生命化学HP

    • URL

      http://www.bunshi-kyouzatsu.jp/

    • Related Report
      2017 Annual Research Report
  • [Remarks] 甲南大学先端生命工学研究所HP 研究業績

    • URL

      http://www.konan-fiber.jp/index.php

    • Related Report
      2017 Annual Research Report
  • [Patent(Industrial Property Rights)] RNAアプタマーのスクリーニング方法2018

    • Inventor(s)
      杉本 直己、遠藤 玉樹
    • Industrial Property Rights Holder
      学校法人甲南学園
    • Industrial Property Rights Type
      特許
    • Filing Date
      2018
    • Related Report
      2017 Annual Research Report

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Published: 2017-07-04   Modified: 2023-01-30  

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