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Analyses of stem cell genomes in long-lived plants

Planned Research

Project AreaPrinciples of pluripotent stem cells underlying plant vitality
Project/Area Number 17H06478
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKyushu University

Principal Investigator

Satake Akiko  九州大学, 理学研究院, 教授 (70506237)

Co-Investigator(Kenkyū-buntansha) 陶山 佳久  東北大学, 農学研究科, 教授 (60282315)
谷 尚樹  国立研究開発法人国際農林水産業研究センター, 林業領域, 主任研究員 (90343798)
Project Period (FY) 2017-06-30 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥72,670,000 (Direct Cost: ¥55,900,000、Indirect Cost: ¥16,770,000)
Fiscal Year 2021: ¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2020: ¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2019: ¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2018: ¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2017: ¥9,230,000 (Direct Cost: ¥7,100,000、Indirect Cost: ¥2,130,000)
Keywords長寿命 / 樹木 / DNA修復 / ゲノム / 突然変異 / 中立 / 自然選択 / 多様性 / 遺伝子 / 数理モデル / 個体内ゲノム変異 / SNPs / 次世代シーケンス / 植物 / 進化 / 生態
Outline of Final Research Achievements

To determine whether stem cell genomes are maintained stably in long-lived organisms, they generated a high-quality genome of Shorea laevis and detected somatic mutations that accumulated over 400 years to accurately estimate the mutation rate prior to natural selection and genetic drift in the next generation population. The number of somatic mutations was shown to increase linearly with growth, and the rate of de novo mutations per base per year was accurately estimated. Detailed analysis of the mutation spectrum showed that mutations caused by DNA damage to UV light were the most abundant (53.1%). Comparative genomic analysis suggested that trees have a higher copy number of poly(ADP-ribose) polymerase (PARP) than perennial and annual plants, contributing to their long-term survival and protection from DNA damage and pathogen infection. These results provide important knowledge in understanding the evolution of DNA repair and lifespan in plants.

Academic Significance and Societal Importance of the Research Achievements

一般に動物では、生殖細胞と体細胞は発生の初期に分離されるため、体細胞に生じた変異は次世代へ受け継がれず、個体の死とともに集団から消失する。これに対して植物では、体細胞の中でも多能性を永続的に維持する幹細胞に生じた変異は、花粉や胚珠を形作り次世代へ受け継がれる。そのため私達は、体細胞で生じる突然変異は、森林生態系におけるゲノム多様性の創出に寄与する重要なプロセスであると考えている。今後は、本研究を発展させ、集団レベルのゲノム多様性の創出機構の解明に取り組む。

Report

(6 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • Research Products

    (110 results)

All 2022 2021 2020 2019 2018 2017 Other

All Int'l Joint Research (12 results) Journal Article (32 results) (of which Int'l Joint Research: 18 results,  Peer Reviewed: 29 results,  Open Access: 20 results) Presentation (64 results) (of which Int'l Joint Research: 22 results,  Invited: 20 results) Book (1 results) Remarks (1 results)

  • [Int'l Joint Research] マレーシア森林研究所(FRIM)(マレーシア)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] ガジャマダ大学(インドネシア)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] マレーシア森林研究所(FRIM)(マレーシア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] ガジャマダ大学(インドネシア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] マレーシア森林研究所(FRIM)(マレーシア)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] ガジャマダ大学(インドネシア)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] マレーシア森林研究所(マレーシア)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] National Dong Hwa University(台湾)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] マレーシア森林研究所(FRIM)(マレーシア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ガジャマダ大学(インドネシア)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] ケンブリッジ大学(英国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] マックスプランク研究所(ドイツ)

    • Related Report
      2017 Annual Research Report
  • [Journal Article] A cross-scale approach to unravel the molecular basis of plant phenology in temperate and tropical climates2022

    • Author(s)
      Akiko Satake, Ai Nagahama, Eriko Sasaki
    • Journal Title

      New Phytologist

      Volume: 28 Issue: 6 Pages: 2340-2353

    • DOI

      10.1111/nph.17897

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] MASTREE+: Time-series of plant reproductive effort from six continents2022

    • Author(s)
      Andrew Hacket-Pain, Jessie J. Foest, Ian S. Pearse, Jalene M. LaMontagne, Walter D. Koenig, Giorgio Vacchiano, et al
    • Journal Title

      Global Change Biology

      Volume: 28 Issue: 9 Pages: 3066-3082

    • DOI

      10.1111/gcb.16130

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Complementary combination of multiplex high-throughput DNA sequencing for molecular phylogeny2022

    • Author(s)
      Yoshihisa Suyama, Shun K. Hirota, Ayumi Matsuo, Yoshihiro Tsunamoto, Chika Mitsuyuki, Atsuki Shimura, Kunihiro Okano
    • Journal Title

      Ecological Research

      Volume: 37 Issue: 1 Pages: 171-181

    • DOI

      10.1111/1440-1703.12270

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis2021

    • Author(s)
      Yamaguchi Nobutoshi、Matsubara Satoshi、Yoshimizu Kaori、Seki Motohide、Hamada Kouta、Kamitani Mari、Kurita Yuko、Nomura Yasuyuki、Nagashima Kota、Inagaki Soichi、Suzuki Takamasa、Gan Eng-Seng、To Taiko、Kakutani Tetsuji、Nagano Atsushi J.、Satake Akiko、Ito Toshiro
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 3480-3480

    • DOI

      10.1038/s41467-021-23766-w

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Studying the genetic basis of masting2021

    • Author(s)
      Akiko Satake, Dave Kelly
    • Journal Title

      The Royal Society, Philosophical Transactions of the royal society B

      Volume: 376 Issue: 1839 Pages: 1-1

    • DOI

      10.1098/rstb.2021.0116

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Gene co-expression network analysis identifies BEH3 as a stabilizer of secondary vascular development in Arabidopsis2021

    • Author(s)
      Furuya Tomoyuki、Saito Masato、Uchimura Haruka、Satake Akiko、Nosaki Shohei、Miyakawa Takuya、Shimadzu Shunji、Yamori Wataru、Tanokura Masaru、Fukuda Hiroo、Kondo Yuki
    • Journal Title

      The Plant Cell

      Volume: 33 Issue: 8 Pages: 2618-2636

    • DOI

      10.1093/plcell/koab151

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Testing the environmental prediction hypothesis for community‐wide mass flowering in South‐East Asia2021

    • Author(s)
      Satake Akiko、Leong Yao Tze、Kosugi Yoshiko、Chen Yu‐Yun
    • Journal Title

      Biotropica

      Volume: 53 Issue: 2 Pages: 608-618

    • DOI

      10.1111/btp.12903

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Copy number analyses of DNA repair genes reveal the role of poly(ADP-ribose) polymerase (PARP) in tree longevity2021

    • Author(s)
      YutaAoyagi Blue, JunkoKusumi, AkikoSatake
    • Journal Title

      iScience

      Volume: 24 Issue: 7 Pages: 1-1

    • DOI

      10.1016/j.isci.2021.102779

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Plant stem cell research is uncovering the secrets of longevity and persistent growth2021

    • Author(s)
      Umeda Masaaki、Ikeuchi Momoko、Ishikawa Masaki、Ito Toshiro、Nishihama Ryuichi、Kyozuka Junko、Torii Keiko U.、Satake Akiko、Goshima Gohta、Sakakibara Hitoshi
    • Journal Title

      The Plant Journal

      Volume: Online ahead of print Issue: 2 Pages: 1-10

    • DOI

      10.1111/tpj.15184

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Removal of repressive histone marks creates epigenetic memory of recurring heat in Arabidopsis2020

    • Author(s)
      5.Yamaguchi, N., Matsubara, S. Yoshimizu, K. Seki, M. Hamada, K. Kamitani, M. Kurita, Y. Inagaki, S. Suzuki, T. Gan, E. To T., Kakutani, T. Nagano, A.J. Satake, A. Ito, T.
    • Journal Title

      bioRxiv

      Volume: 1 Pages: 1-36

    • DOI

      10.1101/2020.05.10.086611

    • Related Report
      2020 Annual Research Report
  • [Journal Article] From theory to experiments for testing the proximate mechanisms of mast seeding: an agenda for an experimental ecology.2020

    • Author(s)
      Bogdziewicz M, Ascoli D, Hacket-Pain A, Koenig WD, Pearse I, Pesendorfer M, Satake A, Thomas P, Vacchiano G, Wohlgemuth T, Tanentzap A.
    • Journal Title

      Ecology Letters

      Volume: 23 Issue: 2 Pages: 210-220

    • DOI

      10.1111/ele.13442

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Small temperature variations are a key regulator of reproductive growth and assimilate storage in oil palm (Elaeis guineensis).2020

    • Author(s)
      Naoki Tani, Zubaidah Aimi Abdul Hamid, Natra Joseph, Othman Sulaiman, Rokiah Hashim, Takamitsu Arai, Akiko Satake, Toshiaki Kondo, Akihiko Kosugi
    • Journal Title

      Scientific reports

      Volume: 10 Issue: 1 Pages: 650-650

    • DOI

      10.1038/s41598-019-57170-8

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Potential of Genome-Wide Association Studies and Genomic Selection to improve productivity and quality of commercial timber species in tropical rainforest, a case study of Shorea platyclados2020

    • Author(s)
      Sawitri, Naoki Tani, Mohammad Na’iem, Widiyatno, Sapto Indrioko, Kentaro Uchiyama, Rempei Suwa, Kevin Kit Siong Ng, Soon Leong Lee, Yoshihiko Tsumura
    • Journal Title

      Forests

      Volume: 11 Issue: 2 Pages: 239-239

    • DOI

      10.3390/f11020239

    • NAID

      120007132795

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)2020

    • Author(s)
      T Lang, P Abadie, V Leger, T Decourcelle, JM Frigerio, C Burban, C Bodenes, E Guichoux, GL Provost, C Robin, N Tani, P Leger, C Lepoittevin, VAE Mujtar, F Hubert, J Tibbits, J Paiva, A Franc, F Raspail, S Mariette, MP Reviron, C Plomion, A Kremer, ML Desprez-Loustau, P Garnier-Gere
    • Journal Title

      bioRxiv

      Volume: 1 Pages: 1-44

    • DOI

      10.1101/388447

    • Related Report
      2019 Annual Research Report
    • Open Access / Int'l Joint Research
  • [Journal Article] 森林遺伝育種学的研究におけるMIG-seq 法の利用2019

    • Author(s)
      陶山佳久
    • Journal Title

      Forest Genetics and Tree Breeding

      Volume: 8 Issue: 2 Pages: 85-89

    • DOI

      10.32135/fgtb.8.2_85

    • NAID

      130007637943

    • ISSN
      2187-3453, 2187-350X
    • Year and Date
      2019-04-25
    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Continuous dynamic adjustment of the plant circadian oscillator2019

    • Author(s)
      Alex A.R. Webb; Motohide Seki; Akiko Satake; Camila Caldana
    • Journal Title

      Nature communications

      Volume: 10 Issue: 1 Pages: 1-9

    • DOI

      10.1038/s41467-019-08398-5

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Drought and cool temperature cue general flowering synergistically in the aseasonal tropical forests of Southeast Asia2019

    • Author(s)
      Satake Akiko、Chen Yu-Yun、Fletcher Christine、Kosugi Yoshiko
    • Journal Title

      Ecological Research

      Volume: 34 Issue: 1 Pages: 40-49

    • DOI

      10.1111/1440-1703.1012

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Field transcriptome revealed a novel relationship between nitrate transport and flowering in Japanese beech2019

    • Author(s)
      Satake Akiko、Kawatsu Kazutaka、Teshima Kosuke、Kabeya Daisuke、Han Qingmin
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 1-12

    • DOI

      10.1038/s41598-019-39608-1

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phenology in the tropics: Physiological controls revealed by long-term monitoring and predictive models2019

    • Author(s)
      Satake Akiko、Kitajima Kaoru
    • Journal Title

      Ecological Research

      Volume: 34 Issue: 1 Pages: 18-19

    • DOI

      10.1111/1440-1703.1143

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Gene regulatory network models in response to sugars in the plant circadian system.2018

    • Author(s)
      Ohara T, Hearn T, Webb, A, Satake A
    • Journal Title

      Journal of Theoretical Biology

      Volume: 457 Pages: 137-151

    • DOI

      10.1016/j.jtbi.2018.08.020

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Species-specific flowering cues among general flowering Shorea species at the Pasoh Research Forest, Malaysia2018

    • Author(s)
      Chen Yu-Yun、Satake Akiko、Sun I-Fang、Kosugi Yoshiko、Tani Makoto、Numata Shinya、Hubbell Stephen P.、Fletcher Christine、Nur Supardi Md. Noor、Wright S. Joseph
    • Journal Title

      Journal of Ecology

      Volume: 106 Issue: 2 Pages: 586-598

    • DOI

      10.1111/1365-2745.12836

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Climate warming shortens flowering duration: a comprehensive assessment of plant phenological responses based on gene expression analyses and mathematical modeling2018

    • Author(s)
      Nagahama Ai、Kubota Yasuhiro、Satake Akiko
    • Journal Title

      Ecological Research

      Volume: 33 Issue: 5 Pages: 1059-1068

    • DOI

      10.1007/s11284-018-1625-x

    • NAID

      40021665093

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synchronized expression of FLOWERING LOCUS T between branches underlies mass flowering in Fagus crenata2018

    • Author(s)
      Satake Akiko、Kawatsu Kazutaka、Chiba Yukako、Kitamura Keiko、Han Qingmin
    • Journal Title

      Population Ecology

      Volume: 61 Issue: 1 Pages: 5-13

    • DOI

      10.1002/1438-390x.1010

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Photosynthetic Entrainment of the Circadian Clock Facilitates Plant Growth under Environmental Fluctuations: Perspectives from an Integrated Model of Phase Oscillator and Phloem Transportation2017

    • Author(s)
      Ohara Takayuki、Satake Akiko
    • Journal Title

      Frontiers in Plant Science

      Volume: 8 Pages: 1-12

    • DOI

      10.3389/fpls.2017.01859

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Adjustment of the Arabidopsis circadian oscillator by sugar signalling dictates the regulation of starch metabolism2017

    • Author(s)
      Seki Motohide、Ohara Takayuki、Hearn Timothy J.、Frank Alexander、da Silva Viviane C. H.、Caldana Camila、Webb Alex A. R.、Satake Akiko
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 1-11

    • DOI

      10.1038/s41598-017-08325-y

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Relationship between seasonal progression of floral meristem development and FLOWERING LOCUS T expression in the deciduous tree Fagus crenata2017

    • Author(s)
      Miyazaki Yuko、Satake Akiko
    • Journal Title

      Ecological Research

      Volume: 32 Issue: 4 Pages: 627-631

    • DOI

      10.1007/s11284-017-1462-3

    • NAID

      40021263117

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Adaptive significance of arboreality: field evidence from a tree-climbing land snail2017

    • Author(s)
      Saeki Ikuyo、Niwa Shigeru、Osada Noriyuki、Hyodo Fujio、Ohta Tamihisa、Oishi Yoshitaka、Hiura Tsutom
    • Journal Title

      Animal Behaviour

      Volume: 127 Pages: 53-66

    • DOI

      10.1016/j.anbehav.2017.02.022

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Does large-scale N fertilization have time-delayed effects on insect community structure by changing oak quantity and quality?2017

    • Author(s)
      Lee J, Nakamura M, Hiura T
    • Journal Title

      Arthropod-Plant Interactions

      Volume: 印刷中 Issue: 4 Pages: 515-523

    • DOI

      10.1007/s11829-016-9485-1

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] The effect of interspecific variation in photosynthetic plasticity on 4-year growth rate and 8-year survival of understorey tree seedlings in response to gap formations in a cool-temperate deciduous forest2017

    • Author(s)
      Oguchi Riichi、Hiura Tsutom、Hikosaka Kouki
    • Journal Title

      Tree Physiology

      Volume: 37 Issue: 8 Pages: 1113-1127

    • DOI

      10.1093/treephys/tpx042

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Bryophytes as bioindicators of the atmospheric environment in urban-forest landscapes2017

    • Author(s)
      Oishi Yoshitaka、Hiura Tsutom
    • Journal Title

      Landscape and Urban Planning

      Volume: 167 Pages: 348-355

    • DOI

      10.1016/j.landurbplan.2017.07.010

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evidence of a reduction in cloud condensation nuclei activity of water-soluble aerosols caused by biogenic emissions in a cool-temperate forest2017

    • Author(s)
      A. Muller, Y. Miyazaki, E. Tachibana, K. Kawamura and T. Hiura
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 8452-8452

    • DOI

      10.1038/s41598-017-08112-9

    • NAID

      120006334790

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] How is the light interception efficiency related to shoot structure in tall canopy species?2017

    • Author(s)
      Osada N, Hiura, T
    • Journal Title

      Oecologia

      Volume: 185 Issue: 1 Pages: 29-41

    • DOI

      10.1007/s00442-017-3926-0

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Presentation] 植物のゲノムを長期間守るしくみ:DNA修復・エピジェネティック制御遺伝子数の進化2022

    • Author(s)
      青柳優太、楠見淳子、佐竹暁子
    • Organizer
      第69回日本生態学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 長寿命植物Shorea laevisの体細胞突然変異の蓄積パターンについて2022

    • Author(s)
      今井亮介、佐々木江理子、笠原雅弘、藤野健、谷尚樹、陶山佳久、佐竹暁子
    • Organizer
      第69回日本生態学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] どんぐりの不思議な戦略2022

    • Author(s)
      佐竹暁子
    • Organizer
      第69回日本生態学会年大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Analyses of stem cell genome diversity in long-lived plants2022

    • Author(s)
      佐竹暁子
    • Organizer
      第63回日本植物生理学会年大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Modeling mutation accumulation and expansion in long-lived trees with complex branching structure2021

    • Author(s)
      Sou Tomimoto, Akiko Satake
    • Organizer
      Society for Mathematical Biology 2021 annual meeting
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ゲノムモザイクとしての植物の個体性2021

    • Author(s)
      佐竹暁子、富本創、今井亮介、佐々木江理子、笠原雅弘、藤野健、谷尚樹、陶山佳久
    • Organizer
      日本植物学会第85回大会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Genetic mosaicism in long-lived trees ゲノムモザイクとしての長寿命樹木の生き方2021

    • Author(s)
      佐竹暁子、富本創、今井亮介、佐々木江理子、笠原雅弘、藤野健、谷尚樹、陶山佳久
    • Organizer
      第44回日本分子生物学会年会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Shorea laevisの体細胞突然変異について2021

    • Author(s)
      今井亮介、佐々木江理子、笠原雅弘、藤野健、谷尚樹、陶山佳久、佐竹暁子
    • Organizer
      第53回種生物学シンポジウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] The role of poly(ADP-ribose) polymerase in longevity in trees: comprehensive analyses of copy number variations in DNA repair genes using the genome database2021

    • Author(s)
      Yuta Aoyagi, Junko Kusumi, Akiko Satake
    • Organizer
      Secrets of stem cells underlying longevity and persistent growth in plants
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 樹木のDNA修復:データベースを用いた植物多種間のDNA修復遺伝子コピー数比較2021

    • Author(s)
      青柳優太、楠見淳子、佐竹暁子
    • Organizer
      三学会合同福岡大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Comparative field transcriptome in masting species to unravel the evolution of reproductive strategies in trees2021

    • Author(s)
      Wang Yufei・北島薫 ・韓慶民・佐竹暁子
    • Organizer
      第68回日本生態学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 長期群集フェノロジーデータを用いた半島マレーシアにおける植物の開花・結実の解析2021

    • Author(s)
      山口香春・森本彩夏・保坂哲朗・沼田真也・佐竹暁子
    • Organizer
      第68回日本生態学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Flowering and fruiting phenology in tropics and its environmental drivers2021

    • Author(s)
      Akiko Satake
    • Organizer
      第68回日本生態学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 樹木における体細胞変異の蓄積と拡がりのシミュレーションモデル2021

    • Author(s)
      富本 創、佐竹 暁子
    • Organizer
      第68回日本生態学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Comprehensive analyses of copy number of DNA repair genes reveals the role of poly(ADP-ribose) polymerase on longevity in trees2021

    • Author(s)
      Yuta Aoyagi, Junko Kusumi, Akiko Satake
    • Organizer
      第68回日本生態学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Comparative field transcriptome in masting species to unravel the evolution of reproductive strategies in trees2020

    • Author(s)
      Wang Yufei・北島薫 ・韓慶民・佐竹暁子
    • Organizer
      2020 Ecology Society of America Annual Meeting
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Do tree have high DNA repair ability?: Comparison analyses of copy number of DNA repair genes across plants2020

    • Author(s)
      Yuta Aoyagi, Junko Kusumi, Akiko Satake
    • Organizer
      2020 Ecology Society of America Annual Meeting
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 樹木における体細胞変異の蓄積・拡散のシミュレーション2020

    • Author(s)
      富本 創、佐竹 暁子
    • Organizer
      2020年度数理生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 開花時期の多様性を生み出す受精遅延2020

    • Author(s)
      佐竹暁子
    • Organizer
      第27回日本時間生物学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Analysis of Species-Specific Environmental Trigger of Reproduction Using Long-Term Phenology Data in Peninsular Malaysia2020

    • Author(s)
      山口香春・森本彩夏・保坂哲朗・沼田真也・佐竹暁子
    • Organizer
      第27回日本時間生物学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 長寿命樹木の生存戦略2020

    • Author(s)
      佐竹暁子、青柳優太
    • Organizer
      第43回日本分子生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 野外比較トランスクリプトームから明らかとなる植物の環境応答:開花時期の多様性を生み出す受精遅延2020

    • Author(s)
      佐竹暁子
    • Organizer
      第6回幹細胞研究会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 樹木の DNA 修復:データベースを用いた植物多種間のDNA修復遺伝子コピー数比較2020

    • Author(s)
      青柳優太、楠見淳子、佐竹暁子
    • Organizer
      第52回種生物学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] 寿命樹木のDNA修復遺伝子コピー数比較2020

    • Author(s)
      青柳優太、楠見淳子、佐竹暁子
    • Organizer
      新学術領域「植物多能性 幹細胞」若手の会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 一年草・多年草・樹木間でDNA修復能力に違いがあるか?:DNA修復遺伝子コピー数比較2020

    • Author(s)
      青柳優太, 楠見淳子, 佐竹暁子
    • Organizer
      第67回日本生態学会大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] GENOMIC PREDICTION OF GROWTH AND WOOD TRAITS OF Shorea platyclados, A COMMERCIAL TIMBER IN SOUTHEAST ASIA2020

    • Author(s)
      Sawitri
    • Organizer
      第131回日本森林学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] フタバガキ科苗木における乾燥応答2020

    • Author(s)
      小林正樹
    • Organizer
      第131回日本森林学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 改良されたMIG-seq法の概要2020

    • Author(s)
      陶山佳久、松尾歩、佐藤光彦、廣田峻
    • Organizer
      日本生態学会第67回全国大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] フィールドトランスクリプトームから明らかとなる植物の環境応答2019

    • Author(s)
      佐竹暁子
    • Organizer
      第8回 九州山口沖縄リズム研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Comparative field transcriptomics in trees2019

    • Author(s)
      Akiko Satake
    • Organizer
      International Symposium: Principles of pluripotent stem cells underlying plant vitality
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Low mutation rates promote the evolution of advantageous traits: simulation analyses2019

    • Author(s)
      Yuta Aoyagi, Satoki Sakai
    • Organizer
      International Symposium: Principles of pluripotent stem cells underlying plant vitality
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Flowering Season in Aseasonal Tropical Rain Forests2019

    • Author(s)
      Akiko Satake
    • Organizer
      Clocks in Model Organisms: Circadian Networks, Physiology and Health
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Unravelling floweringu phenology shift under climate warming by field transcriptome2019

    • Author(s)
      Akiko Satake
    • Organizer
      SEB’s Annual Meeting in Seville, Spain
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Testing the environmental prediction hypothesis for general flowering using flowering phenology data monitored at the Pasoh Forest Reserve in Malaysia2019

    • Author(s)
      Akiko Satake
    • Organizer
      56th Annual meeting of the ASSOCIATION FOR TROPICAL BIOLOGY AND CONSERVATION
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Phase response of plant circadian clocks leads to robust metabolic rhythms under seasonal variations in day lengt2019

    • Author(s)
      Akiko Satake
    • Organizer
      Forum Math-for Industry 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 遺伝子発現によるフェノロジー研究2019

    • Author(s)
      佐竹暁子
    • Organizer
      第51回種生物学シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] 一年草・多年草・樹木間でDNA修復能力に違いがあるか?:DNA修復遺伝子コピー数比較による分析2019

    • Author(s)
      青柳優太, 楠見淳子, 佐竹暁子
    • Organizer
      第51回種生物学シンポジウム
    • Related Report
      2019 Annual Research Report
  • [Presentation] Why do trees live so long time? Comparative analyses of DNA repair genes across plants2019

    • Author(s)
      Yuta Aoyagi, Junko Kusumi, Akiko Satake
    • Organizer
      British ecological society annual meeting 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Potential of Genome Wide Association Studies and Genomic Prediction of Shorea platyclados, an Important Timber Tree Species in Southeast Asia2019

    • Author(s)
      Sawitri
    • Organizer
      森林遺伝育種学会第8回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Genome wide association study approach for tropical timber species to enhance productivity through enrichment planting2019

    • Author(s)
      Naoki Tani
    • Organizer
      A conference by Association Tropical Biology and Conservation, 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Predicting when trees in tropical rain forests bloom2019

    • Author(s)
      佐竹暁子
    • Organizer
      Interdisciplinary Theoretical and Mathematical Sciences Program
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] フィールドトランスクリプトーム解析から明らかとなる樹木の季節応答と適応2019

    • Author(s)
      佐竹暁子
    • Organizer
      第66回日本生態学会大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] ブナ科植物における開花遺伝子の種間比較と発現分析2019

    • Author(s)
      澤崎祐太
    • Organizer
      第66回日本生態学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Analysis of genetic diversity for S.platyclados, an important timber species in Southeast Asia2019

    • Author(s)
      Sawitri
    • Organizer
      第130回日本森林学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Regulation of leaf flushing of dipterocarps in aseasonal Southeast Asia2019

    • Author(s)
      Masaki Kobayashi
    • Organizer
      第66回日本生態学会大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] MIG-seq法:次世代シーケンサーを用いた手軽なゲノムワイド塩基配列分析2019

    • Author(s)
      陶山佳久
    • Organizer
      日本農芸化学会2019年度東京大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Flowering in Trees2018

    • Author(s)
      Akiko Satake
    • Organizer
      2018 Society for Research on Biological Rhythms
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Assessment of plant phenological responses in the tropics based on gene expression analyses and mathematical modeling2018

    • Author(s)
      Akiko Satake
    • Organizer
      ASSOCIATION FOR TROPICAL BIOLOGY AND CONSERVATION 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Unravelling molecular basis for masting using transcriptome analysis and mathematical modeling2018

    • Author(s)
      Akiko Satake
    • Organizer
      2018 Annual Meeting of the Society for Mathematical Biology and the Japanese Society for Mathematical Biology
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Field transcriptome revealed a novel relationship between nitrate transport and flowering in Japanese beech2018

    • Author(s)
      Akiko Satake
    • Organizer
      6th Taiwan-Japan Ecology workshop
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 温暖化環境における植物の開花:エピジェネティック制御モデルによる予測と実証2018

    • Author(s)
      佐竹暁子
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 突然変異率の進化を説明する数理モデル2018

    • Author(s)
      青柳優太
    • Organizer
      新学術領域研究「植物多能性幹細胞」第二回若手ワークショップ
    • Related Report
      2018 Annual Research Report
  • [Presentation] Morphological, physiological and transcriptomic analyses of stem growth in a tropical timber tree species, Shorea leprosula2018

    • Author(s)
      Masaki Kobayashi
    • Organizer
      42nd New Phytologist Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Forest reproductive materials transfer guideline of important tropical trees, and adopted for planting activities in Southeast Asia2018

    • Author(s)
      Naoki Tani
    • Organizer
      4th International Congress on Planted Forests
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fine-scale genetic differentiation causes uneven fitness among seedlings in a dipterocarp species2018

    • Author(s)
      Naoki Tani
    • Organizer
      A conference by Association Tropical Biology and Conservation, 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 森林遺伝育種学的研究のためのMIG-seq(multiplexed ISSR genotyping by sequencing)法の開発2018

    • Author(s)
      陶山佳久
    • Organizer
      森林遺伝育種学会第7回大会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] MIG-seq法:次世代シーケンサーを用いた手軽なゲノムワイド塩基配列分析2018

    • Author(s)
      陶山佳久、松尾歩、廣田峻
    • Organizer
      日本DNA多型学会第27回学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Unravelling molecular basis for masting using transcriptome analysis2018

    • Author(s)
      Akiko Satake
    • Organizer
      日本生態学会第65会全国大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 森林生態・遺伝育種学的研究のための分子生物学的分析手法の開発と普及2018

    • Author(s)
      陶山佳久
    • Organizer
      第129回日本森林学会大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Mass flowering in tropical rain forests in Southeast Asia2017

    • Author(s)
      佐竹暁子
    • Organizer
      第24回日本時間生物学会学術大会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Flowering phenology of seasonal and aseasonal forests2017

    • Author(s)
      Akiko Satake
    • Organizer
      Taiwan Japan 2017 Plant Biology Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 森が色めく季節を遺伝子発現から知る2017

    • Author(s)
      佐竹暁子
    • Organizer
      京都賞2017記念シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] MIG-seq: efficient PCR-based method for genome-wide sequencing using NGS2017

    • Author(s)
      Yoshihisa Suyama, Gustavo M Mori, Chika Mitsuyuki, Yoshihiro Tsunamoto
    • Organizer
      XIX International Botanical Congress
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] MIG-seq: an efficient PCR-based method for genome-wide genotypin2017

    • Author(s)
      Yoshihisa Suyama
    • Organizer
      IUFRO 2017 Genetics & Genomics of Fagaceae
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] Mathematical Modelling in Plant Biology (Morris RJ ed.)2018

    • Author(s)
      Satake A
    • Publisher
      Springer Nature Switzerland AG
    • ISBN
      9783319990699
    • Related Report
      2018 Annual Research Report
  • [Remarks] 九州大学ホームページ

    • URL

      https://www.sci.kyushu-u.ac.jp/koho/topics/topics_210712.html

    • Related Report
      2021 Annual Research Report

URL: 

Published: 2017-07-04   Modified: 2023-01-30  

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