• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

macroscopic structure made by the interactions that differ in the effective distance

Planned Research

Project AreaFrom molecules, cells to organs : trans-hierarchical logic for higher-order pattern and structures
Project/Area Number 22127003
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionOsaka University

Principal Investigator

KONDO Shigeru  大阪大学, 生命機能研究科, 教授 (10252503)

Project Period (FY) 2010-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥158,600,000 (Direct Cost: ¥122,000,000、Indirect Cost: ¥36,600,000)
Fiscal Year 2014: ¥29,120,000 (Direct Cost: ¥22,400,000、Indirect Cost: ¥6,720,000)
Fiscal Year 2013: ¥30,550,000 (Direct Cost: ¥23,500,000、Indirect Cost: ¥7,050,000)
Fiscal Year 2012: ¥31,980,000 (Direct Cost: ¥24,600,000、Indirect Cost: ¥7,380,000)
Fiscal Year 2011: ¥28,990,000 (Direct Cost: ¥22,300,000、Indirect Cost: ¥6,690,000)
Fiscal Year 2010: ¥37,960,000 (Direct Cost: ¥29,200,000、Indirect Cost: ¥8,760,000)
Keywords形態形成 / 皮膚模様 / ゼブラフィッシュ / 反応拡散 / 色素細胞 / チューリング / パターン形成 / アラン・チューリング / 模様形成 / 縞模様 / 反応拡散系 / ネットワーク
Outline of Final Research Achievements

In this project research, we aimed to clarify the mechanism that generates the skin pattern in animals using zebrafish. At the point of beginning, it was already known that the skin pattern has the nature of Turing pattern. However, the details of the cellular mechanism remained almost unknown. Following the prediction from the theory, we identified the cellular behaviors and the related molecules, and finally figured out the cell-cell interaction network that is compatible to the necessary conditions for the turing pattern formation. Although there are still left unsolved some interesting questions, for example, the in vitro pattern formation or the involvement of gap-junction, we concluded that the major part of our project has completed.

Report

(6 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (65 results)

All 2015 2014 2013 2012 2011 2010 Other

All Journal Article (13 results) (of which Peer Reviewed: 13 results,  Open Access: 3 results,  Acknowledgement Compliant: 3 results) Presentation (46 results) (of which Invited: 22 results) Book (1 results) Remarks (5 results)

  • [Journal Article] Rotating pigment cells exhibit an intrinsic chirality2015

    • Author(s)
      Hiroaki Yamanaka & Shigeru Kondo
    • Journal Title

      Genes to cells

      Volume: 20 Issue: 1 Pages: 29-35

    • DOI

      10.1111/gtc.12194

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Is pigment patterning in fish skin determined by the Turing mechanism?(review)2015

    • Author(s)
      Masakatsu Watanabe & Shigeru Kondo
    • Journal Title

      Trends in Genetics

      Volume: 31 Issue: 2 Pages: 88-96

    • DOI

      10.1016/j.tig.2014.11.005

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fish pigmentation. Comment on "Local reorganization of xanthophores fine-tunes and colors the striped pattern of zebrafish".(review)2015

    • Author(s)
      Masakatsu Watanabe & Shigeru Kondo
    • Journal Title

      Science

      Volume: 348 Issue: 6232 Pages: 297-297

    • DOI

      10.1126/science.1261947

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Tetraspanin 3c requirement for pigment cell interactions and boundary formation in zebrafish adult pigment stripes2014

    • Author(s)
      Shinya Inoue, Shigeru Kondo, David M. Parichy , Masakatsu Watanebe
    • Journal Title

      Pigment Cell Melanoma Res.

      Volume: 27 Issue: 2 Pages: 190-200

    • DOI

      10.1111/pcmr.12192

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] In vitro analysis suggests that difference in cell movement during direct interaction can generate various pigment patterns in vivo2014

    • Author(s)
      Yamanaka H, Kondo S
    • Journal Title

      PNAS

      Volume: 111 Issue: 5 Pages: 1867-72

    • DOI

      10.1073/pnas.1315416111

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Involvement of Delta–Notch signaling in zebrafish adult pigment stripe patterning2014

    • Author(s)
      Hamada H, Watanabe M, Lau HE, Nishida T, Hasegawa T, Parichy DM, Kondo S, Parichy DM, Kondo S
    • Journal Title

      Development

      Volume: 141 Issue: 2 Pages: 318-24

    • DOI

      10.1242/dev.099804

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Wing vein patterns of the Hemiptera insect Orosanga japonicus differ among individuals2012

    • Author(s)
      Yoshimoto, E.
    • Journal Title

      Interface Focus

      Volume: vol. 2 no. 4 Issue: 4 Pages: 451-456

    • DOI

      10.1098/rsfs.2011.0112

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule igsf112012

    • Author(s)
      Eom, D.-S., *Inoue, S., Patterson, L. B., Gordon, T. N., Slingwine, R., Kondo, S., #Watanabe, M. & #Parichy, D. M.
    • Journal Title

      PLoS Genet.

      Volume: 8(8) Issue: 8 Pages: e1002899-e1002899

    • DOI

      10.1371/journal.pgen.1002899

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pigment pattern formation by contact-dependent depolarization2012

    • Author(s)
      Inaba, M.
    • Journal Title

      Science

      Volume: 335 Issue: 6069 Pages: 677-677

    • DOI

      10.1126/science.1212821

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Shh signaling is essential for rugae morphogenesis in mice2011

    • Author(s)
      Lee JM
    • Journal Title

      Histochemistry and Cell Biology

      Volume: 136(6) Issue: 6 Pages: 663-675

    • DOI

      10.1007/s00418-011-0870-7

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Periodic stripe formation by a Turing mechanism operating at growth zones in the mammalian palate2011

    • Author(s)
      Economou AD
    • Journal Title

      Nature Genetics

      Volume: 44(3) Issue: 3 Pages: 348-351

    • DOI

      10.1038/ng.1090

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Blending of animal colour patterns by hybridization2010

    • Author(s)
      Miyazawa S, Okamoto M, Kondo S
    • Journal Title

      Nature Communications

      Volume: (電子版)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation2010

    • Author(s)
      Kondo S, Miura T
    • Journal Title

      Science

      Volume: 329 Pages: 1616-20

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Mechanism of skin pattern formation in living organisums2014

    • Author(s)
      近藤 滋
    • Organizer
      MBI-Japan Joint Symposium 2 – 4 December 2014 on “Mechanobiology of Development and Multicellular Dynamics”
    • Place of Presentation
      Mechanobiology Institute, Singapore (MBI)
    • Year and Date
      2014-12-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] 波が作る動物の模様と形2014

    • Author(s)
      近藤 滋
    • Organizer
      第7回 ChemBioハイブリッドレクチャー
    • Place of Presentation
      東京大学 武田ホール
    • Year and Date
      2014-10-04
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A more generalized mechanism that can produce the Turing patterns2014

    • Author(s)
      近藤 滋
    • Organizer
      JSMB/SMB 2014
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2014-07-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Turing pattern without diffusion2014

    • Author(s)
      近藤 滋
    • Organizer
      JSMB/SMB 2014
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2014-07-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Turing波が作る動物の体2014

    • Author(s)
      近藤 滋
    • Organizer
      第18回バイオテンプレート研究懇談会(JST-ERATO 彌田超集積材料プロジェクト)
    • Place of Presentation
      東京工業大学 田町キャンパス(キャンパスイノベーションセンター
    • Year and Date
      2014-06-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Interaction among the pigment cells forms the Turing pattern in the skin of zebrafish2013

    • Author(s)
      Shigeru Kondo
    • Organizer
      国際高等研究所 研究プロジェクト 「ゲノム工学とイメージングサイエンスに基づく生命システム研究の新展開」 2012年度第一回研究会
    • Place of Presentation
      国際高等研究所(京都府)
    • Year and Date
      2013-02-22
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Collaboration of mathematical theory and experimental biology2013

    • Author(s)
      Shigeru Kondo
    • Organizer
      USGEB Annual Meeting 2013
    • Place of Presentation
      University of Zurich (Zurich, Swiss Confederation)
    • Year and Date
      2013-02-01
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Turing Pattern Formation without Diffusion2013

    • Author(s)
      Shigeru Kondo
    • Organizer
      The 23rd CDB Meeting
    • Place of Presentation
      理化学研究所(兵庫県)
    • Year and Date
      2013-01-22
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Zebrafish Pigment Patterning by Local Cell Interactions2013

    • Author(s)
      Hiroaki Yamanaka
    • Organizer
      The 23rd CDB Meeting
    • Place of Presentation
      理化学研究所(兵庫県)
    • Year and Date
      2013-01-22
    • Related Report
      2012 Annual Research Report
  • [Presentation] In vitroでの解析はゼブラフィッシュの模様が色素細胞間の直接相互作用によって自律的に形成されることを示唆する2012

    • Author(s)
      山中 洋昭
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場(福岡県)
    • Year and Date
      2012-12-10
    • Related Report
      2012 Annual Research Report
  • [Presentation] Turing pattern without diffusion2012

    • Author(s)
      Shigeru Kondo
    • Organizer
      CDB Swiss Japanese Development Biology Meeting
    • Place of Presentation
      京都ガーデンパレス(京都府)
    • Year and Date
      2012-11-06
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] ゼブラフィッシュの体表模様形成における細胞接着因子の関与2012

    • Author(s)
      井上 新哉
    • Organizer
      日本動物学会第83回大会
    • Place of Presentation
      大阪大学豊中キャンパス(大阪府)
    • Year and Date
      2012-09-13
    • Related Report
      2012 Annual Research Report
  • [Presentation] Turing pattern without diffusion2012

    • Author(s)
      Shigeru Kondo
    • Organizer
      Gordon Research Conferences
    • Place of Presentation
      Colby College (Waterville, USA)
    • Year and Date
      2012-07-16
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Zebrafish pigment cells arrange themselves into specific patterns through direct cell interactions2012

    • Author(s)
      Hiroaki Yamanaka
    • Organizer
      10th International Conference on Zebrafish Development and Genetics
    • Place of Presentation
      Overture Center (Madison, USA)
    • Year and Date
      2012-06-21
    • Related Report
      2012 Annual Research Report
  • [Presentation] Repulsive Movement of Pigment Cells Caused by Contact-Dependent Depolarization Contributes to Stripe Patterning2012

    • Author(s)
      Masafumi Inaba
    • Organizer
      10th International Conference on Zebrafish Development and Genetics
    • Place of Presentation
      Overture Center (Madison, USA)
    • Year and Date
      2012-06-21
    • Related Report
      2012 Annual Research Report
  • [Presentation] Turing Pattern Formation Without Diffusion2012

    • Author(s)
      Shigeru Kondo
    • Organizer
      Turing Centenary Conference
    • Place of Presentation
      University of Cambridge (Cambridge, UK)
    • Year and Date
      2012-06-20
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Notch-Delta signal has critical role in the stripe pattern formation in zebrafish2011

    • Author(s)
      Hiroki Hamada
    • Organizer
      7th European Zebrafish Meeting
    • Place of Presentation
      Edinburgh International Conference Centre (Edinburgh, Scotland)
    • Related Report
      2011 Annual Research Report
  • [Presentation] In vitro analysis demonstrated that the differences in interactions between pigment cells lead to the various surface patterns of zebrafish2011

    • Author(s)
      山中 洋昭
    • Organizer
      第17回小型魚類研究会
    • Place of Presentation
      東レ総合研修センター(静岡県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Xanthophores help Melanophores’ survival by Notch-Delta signaling2011

    • Author(s)
      浜田 裕貴
    • Organizer
      第17回小型魚類研究会
    • Place of Presentation
      東レ総合研修センター(静岡県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] ゼブラフィッシュ体表パターン形成におけるconnexin41.8の機能解析2011

    • Author(s)
      渡辺 大祐
    • Organizer
      日本動物学会 第82回 旭川大会 2011
    • Place of Presentation
      神楽地区公共施設群(北海道)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Interactions between zebrafish pigment cells responsible for the generation of Turing patterns2010

    • Author(s)
      Shigeru Kondo
    • Organizer
      16th Meeting of the European Society for Pigment Cell Research
    • Place of Presentation
      Cambridge, UK(招待講演)
    • Year and Date
      2010-09-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] Turing model, a framework for explaining biological pattern formation2010

    • Author(s)
      Shigeru Kondo
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市(招待講演)
    • Year and Date
      2010-07-23
    • Related Report
      2010 Annual Research Report
  • [Presentation] Pattern formation in fixed 2D fields vs morphogenesis in growing 3D fields2010

    • Author(s)
      Shigeru Kondo
    • Organizer
      Development of pattern in the nervous system
    • Place of Presentation
      Minerve, France(招待講演)
    • Year and Date
      2010-05-15
    • Related Report
      2010 Annual Research Report
  • [Presentation] Another mechanism to make the stripe pattern

    • Author(s)
      Shigeru Kondo
    • Organizer
      Molecular Mechanisms in Development and Evolution
    • Place of Presentation
      University of Basel (Basel, Switzerland)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Turing pattern formation in the skin of living fish

    • Author(s)
      Shigeru Kondo
    • Organizer
      2nd Annual Wintrer qBIO meeting
    • Place of Presentation
      Hilton Waikoloa Village (Hawaii, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Pigmentation pattern

    • Author(s)
      Shigeru Kondo
    • Organizer
      Mechanics and Growth of Tissues: From Development to Cancer
    • Place of Presentation
      Institut Curie (Paris, France)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Mechanism of skin pattern regeneration in zebrafish

    • Author(s)
      Shigeru Kondo
    • Organizer
      International Symposium on Wound Regeneration and Repair
    • Place of Presentation
      National Cheng Kung University (Tainan, Taiwan)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Turing pattern formation without diffusion

    • Author(s)
      Shigeru Kondo
    • Organizer
      2013 International Symposium on Development, Morphogenesis and Stem Cells & 9th Annual Meeting of Taiwan Society for Stem Cell Research
    • Place of Presentation
      National Yang-Ming University (Taipei, Taiwan)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Contribution of the adhesion molecules in skin pattern formation of zebrafish

    • Author(s)
      Shinya Inoue
    • Organizer
      8th European Zebrafish Meeting
    • Place of Presentation
      Palau de Congressos de Catalunya (Barcelona, Spain)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Turing Pattern Formation without diffusion

    • Author(s)
      Shigeru Kondo
    • Organizer
      Workshop on Patterns and Hydrodynamic Instabilities in Reactive Systems
    • Place of Presentation
      Université libre de Bruxelles (Brussels, Belgium)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Turing Pattern Formation in the Real Biological System

    • Author(s)
      Shigeru Kondo
    • Organizer
      Computational approaches to networks, cells and tissues
    • Place of Presentation
      PRBB Auditorium (Barcelona, Spain)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] テトラスパニンはゼブラフィッシュ黒色素胞の細胞移動に重要な役割を持つ

    • Author(s)
      井上 新哉
    • Organizer
      日本動物学会 第84回岡山大会
    • Place of Presentation
      岡山大学(岡山県岡山市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Tetraspanin 3c is required for migration and boundary formation of pigment cells in zebrafish skin pattern formation

    • Author(s)
      井上 新哉
    • Organizer
      第19回小型魚類研究会
    • Place of Presentation
      仙台市情報・産業プラザ(宮城県仙台市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Analysis of mutant stöpseldtl28d (stp)indicating the vertebral form abnormality

    • Author(s)
      三須 晃裕
    • Organizer
      第46回発生生物学会年会
    • Place of Presentation
      くにびきメッセ(島根県松江市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] How experiment and mathmatics can cooperate in the study of Turing patterns of real biological systems?

    • Author(s)
      Shigeru Kondo
    • Organizer
      8th European Conference on Mathematical and Theoretical Biology
    • Place of Presentation
      agiellonian University (Krakow, Poland)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Turing pattern in the real biological system

    • Author(s)
      Shigeru Kondo
    • Organizer
      BIRS Workshop
    • Place of Presentation
      Banff International Research Station (Banff, Canada)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Periodic pattern formation in the skin of animals

    • Author(s)
      Shigeru Kondo
    • Organizer
      名古屋大学2011GCOE国際シンポジウム
    • Place of Presentation
      名古屋大学野依記念学術交流会館(愛知県)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Periodic pattern formation in the skin of animals

    • Author(s)
      Shigeru Kondo
    • Organizer
      International Symposium on Complex Systems 2011
    • Place of Presentation
      東京大学小柴ホール(東京都)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] ゼブラフィッシュ色素細胞培養系を用いた、表面パターン形成機構における細胞間相互作用の解析

    • Author(s)
      山中 洋昭
    • Organizer
      第44回日本発生生物学会大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] 色素細胞間の接触による膜電位変化はゼブラフィッシュの模様形成に寄与する

    • Author(s)
      稲葉 真史
    • Organizer
      第44回日本発生生物学会大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Notchシグナルは、ゼブラフィッシュの模様形成における長距離の活性化機構を担う

    • Author(s)
      浜田 裕貴
    • Organizer
      第44回日本発生生物学会大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] ゼブラフィッシュの体表模様形成においてコネキシン41.8のN末配列が重要な働きを持つ

    • Author(s)
      渡辺 大祐
    • Organizer
      第44回日本発生生物学会大会
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Skin pattern formation as a live Turing wave in animals

    • Author(s)
      近藤 滋
    • Organizer
      日本植物学会第75回大会
    • Place of Presentation
      東京大学駒場キャンパス(東京都)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] in vitroにおける色素細胞間の相互作用解析によるパターン形成機構の再構築

    • Author(s)
      山中 洋昭
    • Organizer
      日本発生生物学会 秋季シンポジウム2011
    • Place of Presentation
      自然科学研究機構 岡崎カンファレンスセンター(愛知県)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Mechanism of Zebrafish Skin Pattern Formation

    • Author(s)
      近藤 滋
    • Organizer
      CDB SYMPOSIUM 2012
    • Place of Presentation
      自然科学研究機構 岡崎カンファレンスセンター(愛知県)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] “波”が生み出す多彩な生命機能

    • Author(s)
      近藤 滋
    • Organizer
      第89回日本生理学会大会
    • Place of Presentation
      長野県松本文化会館 (長野県)
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Book] 現代生物科学入門8システムバイオロジー2010

    • Author(s)
      近藤滋, 他(共著)
    • Total Pages
      40
    • Publisher
      岩波新書
    • Related Report
      2010 Annual Research Report
  • [Remarks] 大阪大学大学院生命機能研究科  パターン形成研究室 近藤滋研究室

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/skondo/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/skondo/

    • Related Report
      2013 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/skondo/

    • Related Report
      2012 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/skondo/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/skondo/

    • Related Report
      2010 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi