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Exploration of target molecules based on genome analysis and molecular tracing

Planned Research

Project AreaMolecular Science for Nanomedicine
Project/Area Number 23107010
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionNagoya University

Principal Investigator

Natsume Atsushi  名古屋大学, 医学(系)研究科(研究院), 准教授 (30362255)

Co-Investigator(Kenkyū-buntansha) SENGA Takeshi  名古屋大学, 医学系研究科, 准教授 (80419431)
URISU Tsuneo  名古屋大学, 工学研究科, 客員教授 (50249950)
Project Period (FY) 2011-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥99,710,000 (Direct Cost: ¥76,700,000、Indirect Cost: ¥23,010,000)
Fiscal Year 2015: ¥11,830,000 (Direct Cost: ¥9,100,000、Indirect Cost: ¥2,730,000)
Fiscal Year 2014: ¥13,650,000 (Direct Cost: ¥10,500,000、Indirect Cost: ¥3,150,000)
Fiscal Year 2013: ¥15,470,000 (Direct Cost: ¥11,900,000、Indirect Cost: ¥3,570,000)
Fiscal Year 2012: ¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2011: ¥41,600,000 (Direct Cost: ¥32,000,000、Indirect Cost: ¥9,600,000)
Keywords脳腫瘍 / がん / ゲノム / 遺伝学 / 細胞生物学 / ナノメディシン / ヒストン / エピジェネティクス / 遺伝子解析
Outline of Final Research Achievements

Various serine/threonine kinases are activated in cells upon numerous extracellular stresses, such as heat, hypoxia and oxidation. These stresses activate four different types of kinases, EIF2AK1, EIF2AK2, EIF2AK3, EIF2AK4, which consequently promote phosphorylation of eIF2α at Ser51. Our proteomics analysis of SG components revealed UBAP2L is a critical component of SG. UBAP2L contains ubiquitin-associated domain and RGG motif. UBAP2L is localized to SGs when cells are treated with heat, arsenite, hydrogen peroxide, and sorbitol. Fluorescence recovery after photobleaching (FRAP) analysis revealed that UBAP2L localization to the SG is dynamic. UBAP2L depletion by siRNA transfection showed that UBAP2L was critical for the organization of SG. Formation of SG is associated with cell survival in the presence of extracellular stresses. Further analysis of UBAP2L and UBAP2 functions in RNA processing and SG formation may give insight for the pathogenesis of neurodegenerative diseases.

Report

(6 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • Research Products

    (31 results)

All 2016 2015 2014 2013 2012 2011 Other

All Journal Article (23 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 23 results,  Open Access: 4 results,  Acknowledgement Compliant: 8 results) Presentation (8 results) (of which Invited: 3 results)

  • [Journal Article] SATB1 and SATB2 play opposing roles in c-Myc expression and progression of colorectal cancer.2016

    • Author(s)
      1.Mansour MA, Hyodo T, Akter KA, Kokuryo T, Uehara K, Nagino M, Senga
    • Journal Title

      Oncotarget

      Volume: 7 Pages: 4993-5006

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] FAM98A is a novel substrate of PRMT1 required for tumor cell migration, invasion, and colony formation.2016

    • Author(s)
      Akter KA, Mansour MA, Hyodo T, Ito S, Hamaguchi M, Senga T.
    • Journal Title

      Tumour Biol.

      Volume: 1 Pages: 111-1113

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Arginine methylation of ubiquitin-associated protein 2-like is required for the accurate distribution of chromosomes.2016

    • Author(s)
      4.Maeda M, Hasegawa H, Sugiyama M, Hyodo T, Ito S, Chen D, Asano E, Masuda A, Hasegawa Y, Hamaguchi M, Senga T.
    • Journal Title

      FASEB J.

      Volume: 30 Pages: 312-23

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] HOXB13 and ALX4 induce SLUG expression for the promotion of EMT and cell invasion in ovarian cancer cells.2015

    • Author(s)
      Yuan H, Kajiyama H, Ito S, Chen D, Shibata K, Hamaguchi M, Kikkawa F, Senga T.
    • Journal Title

      Oncotarget

      Volume: 6 Pages: 13359-70

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Lenalidomide enhances the function of chimeric antigen receptor T cells against the epidermal growth factor receptor variant III by enhancing immune synapses.2015

    • Author(s)
      Kuramitsu S, Ohno M, Ohka F, Shiina S, Yamamichi A, Kato A, Tanahashi K, Motomura K, Kondo G, Kurimoto M, Senga T, Wakabayashi T, Natsume A
    • Journal Title

      Cancer Gene Ther,

      Volume: 22 Pages: 487-95

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Mutational landscape and clonal architecture in grade II and III gliomas.2015

    • Author(s)
      Suzuki H, Aoki K,Niida A, Motomura K, Ohka F, Yamamoto T, Tanahashi K, Ranjit M,Wakabayashi T, Yoshizato T, Kataoka K, Yoshida K, Nagata Y, Sato-Otsubo A, Tanaka H, Sanada M, Kondo Y, Nakamura H, Mizoguchi M, Abe T, Muragaki Y, Watanabe R, Ito I, Miyano S, Natsume A, Ogawa S
    • Journal Title

      Nat Genet

      Volume: 47 Pages: 458-68

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Mutational landscape and clonal architecture in grade II and III gliomas2015

    • Author(s)
      Suzuki H, Aoki K, Natsume A, Ogawa S. et al.
    • Journal Title

      Nat Genet.

      Volume: 47 Issue: 5 Pages: 458-468

    • DOI

      10.1038/ng.3273

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Paired related homeobox 1 is associated with the invasive properties of glioblastoma cells.2015

    • Author(s)
      Sugiyama M, Hasegawa H, Ito S, Sugiyama K, Maeda M, Aoki K, Wakabayashi T, Hamaguchi M, Natsume A, Senga T.
    • Journal Title

      Oncol Rep.

      Volume: 33 Issue: 3 Pages: 1123-30

    • DOI

      10.3892/or.2014.3681

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Assessment of tumor cells in a mouse model of diffuse infiltrative glioma by Raman spectroscopy2014

    • Author(s)
      Tanahashi K, Natsume A, Ohka F, Momota H, Kato A, Motomura K, Watabe N, Muraishi S, Nakahara H, Saito Y, Takeuchi I, Wakabayashi T
    • Journal Title

      Biomed Res Int

      Volume: 1 Pages: 860241-860241

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Olig2 labeling index is correlated with histological and molecular classifications in low-grade diffuse gliomas.2014

    • Author(s)
      Suzuki A, Nobusawa S, Natsume A, Suzuki H, Kim YH, Yokoo H, Nagaishi M, Ikota H, Nakazawa T, Wakabayashi T, Ohgaki H, Nakazato Y
    • Journal Title

      J Neurooncol

      Volume: 120 Pages: 283-91

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Novel somatic and germline mutations in intracranial germ cell tumours.2014

    • Author(s)
      Wang L, Yamaguchi S, Burstein MD, Terashima K, Chang K, Ng HK, Nakamura H, He Z, Doddapaneni H, Lewis L, Wang M, Suzuki T, Nishikawa R, Natsume A, Terasaka S, Dauser R, Whitehead W, Adekunle A, Sun J, Qiao Y, Marth G, Muzny DM, Gibbs RA, Leal SM, Wheeler DA, Lau CC
    • Journal Title

      Nature

      Volume: 511 Pages: 241-5

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Epigenetic dysregulation in glioma.2014

    • Author(s)
      Kondo Y, Katsushima K, Ohka F, Natsume A, Shinjo K
    • Journal Title

      Cancer Sci

      Volume: 105 Pages: 363-9

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Assessment of tumor cells in a mouse model of diffuse infiltrative glioma by Raman spectroscopy.2014

    • Author(s)
      Tanahashi K, Natsume A, Ohka F, Momota H, Kato A, Motomura K, Watabe N, Muraishi S, Nakahara H, Saito Y, Takeuchi I, Wakabayashi T.
    • Journal Title

      Biomed Res Int.

      Volume: 2014 Pages: 860241-860241

    • DOI

      10.1155/2014/860241

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Olig2 labeling index is correlated with histological and molecular classifications in low-grade diffuse gliomas.2014

    • Author(s)
      Suzuki A, Nobusawa S, Natsume A, Suzuki H, Kim YH, Yokoo H, Nagaishi M, Ikota H, Nakazawa T, Wakabayashi T, Ohgaki H, Nakazato Y.
    • Journal Title

      J Neurooncol.

      Volume: 120 Issue: 2 Pages: 283-91

    • DOI

      10.1007/s11060-014-1568-1

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Effectiveness of plasma treatment on gastric cancer cells.2014

    • Author(s)
      Torii K, Yamada S, Nakamura K, Tanaka H, Kajiyama H, Tanahashi K, Iwata N, Kanda M, Kobayashi D, Tanaka C, Fujii T, Nakayama G, Koike M, Sugimoto H, Nomoto S, Natsume A, Fujiwara M, Mizuno M, Hori M, Saya H, Kodera Y.
    • Journal Title

      Gastric Cancer.

      Volume: 2014 Pages: 100-100

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The role of PLK1-phosphorylated SVIL in myosin II activation and cytokinetic furrowing.2013

    • Author(s)
      Hasegawa H, Hyodo T, Asano E, Ito S, Maeda M, Kuribayashi H, Natsume A, Wakabayashi T, Hamaguchi M, Senga T.
    • Journal Title

      J Cell Sci.

      Volume: 126 Pages: 3627-3637

    • DOI

      10.1242/jcs.124818

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chromatin regulator PRC2 is a key regulator of epigenetic plasticity in glioblastoma.2013

    • Author(s)
      Natsume A, Ito M, Katsushima K, Ohka F, Hatanaka A, Shinjo K, Sato S, Takahashi S, Ishikawa Y, Takeuchi I, Shimogawa H, Uesugi M, Okano H, Kim SU, Wakabayashi T, Issa JP, Sekido Y, Kondo Y.
    • Journal Title

      Cancer Res.

      Volume: 15 Issue: 14 Pages: 4559-4570

    • DOI

      10.1158/0008-5472.can-13-0109

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel monoclonal antibody GMab-m1 specifically recognizes IDH1-R132G mutation.2013

    • Author(s)
      Kato Y, Natsume A, Kaneko MK.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 432 Issue: 4 Pages: 564-567

    • DOI

      10.1016/j.bbrc.2013.02.049

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A hypoxia-inducible factor (HIF)-3a splicing variant, HIF・3a4 impairs angiogenesis in hypervascular malignant meningiomas with epigenetically silenced HIF-3α42013

    • Author(s)
      Ando H, Natsume A, Iwami K, Ohka F, Kuchimaru T, Kizaka-Kondoh S, Ito K
    • Journal Title

      Biochem Biophys Res Commun

      Volume: (in press) Issue: 1 Pages: 139-144

    • DOI

      10.1016/j.bbrc.2013.02.044

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Adoptive transfer of genetically modified Wilms' tumor 1-specific T cells in a novel malignant skull base meningioma model.2013

    • Author(s)
      Iwami K, Natsume A, Ohno M, Ikeda H, Mineno J, Nukaya I, Okamoto S, Fujiwara H, Yasukawa M, Shiku H, Wakabayashi T.
    • Journal Title

      Neuro Oncol.

      Volume: 15 Issue: 6 Pages: 747-758

    • DOI

      10.1093/neuonc/not007

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Intravenous administration of temozolomide as a useful alternative over oral treatment with temozolomide capsules in patients with gliomas2012

    • Author(s)
      Motomura K, Natsume A, et al
    • Journal Title

      J Neurooncol

      Volume: 106 Pages: 209-11

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The global DNA methylation surrogate LINE-1 methylation is correlated with MGMT promoter methylation and is a better prognostic factor for glioma2011

    • Author(s)
      Ohka F, Natsume A, et al
    • Journal Title

      PloS ONE

      Volume: 6

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Long-term survival in patients with newly diagnosed primary central nervous system lymphoma treated with dexamethasone, etoposide, ifosfamide and carboplatin chemotherapy and whole-brain radiation therapy2011

    • Author(s)
      Motomura K, Natsume A, et al
    • Journal Title

      Leuk Lymphoma

      Volume: I52 Pages: 2069-75

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Gliomaにおける治療戦略2011

    • Author(s)
      夏目敦至
    • Organizer
      鹿児島脳神経外科セミナー
    • Place of Presentation
      鹿児島(招待講演)
    • Year and Date
      2011-11-04
    • Related Report
      2011 Annual Research Report
  • [Presentation] Current trends in chemotherapy for glioblastoma multiforme2011

    • Author(s)
      夏目敦至
    • Organizer
      奈良脳神経外科セミナー
    • Place of Presentation
      難波、大阪(招待講演)
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] 悪性脳腫瘍のエピジェネティクス異常2011

    • Author(s)
      夏目敦至
    • Organizer
      神奈川脳神経外科セミナー
    • Place of Presentation
      神奈川県(招待講演)
    • Year and Date
      2011-09-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Epigenetic alteration in glioma2011

    • Author(s)
      夏目敦至
    • Organizer
      Korea Brain Tumor Society Meeting
    • Place of Presentation
      ソウル、韓国(招待講演)
    • Year and Date
      2011-06-25
    • Related Report
      2011 Annual Research Report
  • [Presentation] IDH1変異のある悪性脳腫瘍のメタボローム解析

    • Author(s)
      夏目敦至
    • Organizer
      がんと代謝シンポジウム2013
    • Place of Presentation
      慶応大学(東京)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Epigenetic plasticity in cancer-intiating cells

    • Author(s)
      Natsume A
    • Organizer
      Minisymposium Neuroscience
    • Place of Presentation
      ウィーン(オーストリア)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 癌が運動野、言語野に近くに転移したらどうしますか

    • Author(s)
      夏目敦至
    • Organizer
      癌と中枢神経合併症フォーラム2013
    • Place of Presentation
      日本大学国際関係部(三島市)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 悪性脳腫瘍細胞のヒエラルキーとエピゲノム変化

    • Author(s)
      夏目敦至
    • Organizer
      脳腫瘍学術講演会
    • Place of Presentation
      リーガロイヤルホテル(大阪)
    • Related Report
      2012 Annual Research Report
    • Invited

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Published: 2011-08-01   Modified: 2019-07-29  

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