Evolutionary and molecuar genetic studies to logics in plant development

• Project Area: Multidimensional Exploration of Logics of Plant Development
• Project/Area Number: 25113009
• Research Category: Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)
• Allocation Type: Single-year Grants
• Review Section: Biological Sciences
• Research Institution: Kyoto University
• Principal Investigator: Kohchi Takayuki 京都大学, 生命科学研究科, 教授 (40202056)
• Co-Investigator(Kenkyū-buntansha): 嶋村 正樹 広島大学, 理学研究科, 准教授 (00432708)
• Co-Investigator(Renkei-kenkyūsha): ISHIZAKI Kimitsune 神戸大学, 理学研究科, 准教授 (00452293) ; OSAKABE Keishi 徳島大学, 生物資源産業学部, 教授 (70450335) ; SUETSUGU Noriyuki 京都大学, 生命科学研究科, 特定助教 (60514156) ; SUGANO Shigeo 立命館大学, グローバルイノベ機構, 助教 (60726313) ; NAKAGAMI Hirofumi 理化学研究所, 環境資源科学研究センター, チームリーダー (20435663) ; NAKAMURA Yasukazu 遺伝学研究所, 大量遺伝情報研究室, 教授 (60370920) ; NISHIHAMA Ryuichi 京都大学, 生命科学研究科, 准教授 (70283455) ; YAMAOKA Shohei 京都大学, 生命科学研究科, 助教 (00378770)
• Project Period (FY): 2013-06-28 – 2018-03-31
• Project Status: Completed (Fiscal Year 2017)
• Budget Amount: ¥100,880,000 (Direct Cost: ¥77,600,000、Indirect Cost: ¥23,280,000); Fiscal Year 2017: ¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000); Fiscal Year 2016: ¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000); Fiscal Year 2015: ¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000); Fiscal Year 2014: ¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000); Fiscal Year 2013: ¥23,400,000 (Direct Cost: ¥18,000,000、Indirect Cost: ¥5,400,000)
• Keywords: 基部陸上植物 / モデル生物 / 有性生殖 / 環境応答 / ゼニゴケ / オーキシン / 陸上植物進化 / 植物 / 発生分化 / 分子遺伝学 / 光受容体 / 発生制御 / 発生・分化 / 進化 / 植物発生生物学 / 苔類ゼニゴケ / 植物発生 / 植物環境応答 / 植物発生制御 / 光形態形成 / 背腹性

Outline of Final Research Achievements

We studied the logics of plant development from a point of evolutionary view using the liverwort, Marchantia polymorpha, a member of basal land plant lineages as a model. We developed the genome database, genome editing vectors, and other molecular tools for experimental biology of M. polymorpha. By the comparative and reverse genetic studies of fundamental factors known to regulate angiosperm development, we showed that the common ancestor of land plants had acquired the basic system of plant development including auxin-dependent three-dimensional growth, light signaling pathways, cell division regulation, and environmental induction of sexual reproduction. Starting with the mutant analysis and its causal gene identification in M. polymorpha, we identified the master regulator, BONOBO, which determines the germline cell lineage in land plants. We concluded the evolutionary strategies to plant developmental biology are highly effective and informative.

Research Products

• [Int'l Joint Research] モナシュ大学(オーストラリア)
• [Int'l Joint Research] メンデル研究所(オーストリア)
• [Int'l Joint Research] マドリード自治大学(スペイン)
• [Int'l Joint Research] 国立台湾大学(台湾)
• [Int'l Joint Research] エジンバラ大学/オックスフォード大学/ブリストル大学(英国)
• [Int'l Joint Research] モナシュ大学(オーストラリア)
• [Int'l Joint Research] メンデル研究所(オーストリア)
• [Int'l Joint Research] 国立台湾大学(台湾)
• [Int'l Joint Research] ミネソタ大学/ケンタッキー大学(米国)
• [Int'l Joint Research] エジンバラ大学/ケンブリッジ大学/オックスフォード大学(英国)
• [Int'l Joint Research]
• [Int'l Joint Research] Monash University(オーストラリア)
• [Int'l Joint Research] University of Osnabruck/University of Ulm/University of Wurzburg(ドイツ)
• [Int'l Joint Research] Gregor Mendel Institute(オーストリア)
• [Int'l Joint Research] University of Oxford/University of Cambridge/University of Edinburgh(英国)
• [Int'l Joint Research] 国立台湾大学(台湾)
• [Int'l Joint Research]
• [Journal Article] Generative Cell Specification Requires Transcription Factors Evolutionarily Conserved in Land Plants (2018)
  • Author(s): Yamaoka, S., Nishihama, R., Yoshitake, Y., Ishida, S., Inoue, K., Saito, M., Okahashi, K., Bao, H., Nishida, H., Yamaguchi, K., Shigenobu, S., Ishizaki, K., Yamato, K.T., and Kohchi, T.
  • Journal Title: Current Biology Volume: 28 Issue: 3 Pages: 479-486
  • DOI: 10.1016/j.cub.2017.12.053
  • Peer Reviewed / Open Access
• [Journal Article] Ligand-receptor co-evolution shaped the jasmonate pathway in land plants (2018)
  • Author(s): Monte Isabel、Ishida Sakiko、Zamarreno Angel M.、Hamberg Mats、Franco-Zorrilla Jose M.、Garcia-Casado Gloria、Gouhier-Darimont Caroline、Reymond Philippe、Takahashi Kosaku、Garcia-Mina Jose M.、Nishihama Ryuichi、Kohchi Takayuki、Solano Roberto
  • Journal Title: Nature Chemical Biology Volume: 14 Issue: 5 Pages: 480-488
  • DOI: 10.1038/s41589-018-0033-4
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. (2017)
  • Author(s): Bowman J, Kouchi T,..(106名）..Yokoyama R, ..(4名)
  • Journal Title: Cell Volume: 171 Issue: 2 Pages: 287-304
  • DOI: 10.1016/j.cell.2017.09.030
  • NAID: 120006353839
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Early evolution of the land plant circadian clock (2017)
  • Author(s): 117.Linde, A. M.*, Eklund, D. M.*, Kubota, K.*, Pederson, E. R. A., Holm, K., Gyllenstrand, N., Nishihama, R., Cronberg, N., Muranaka, T., Oyama, T., Kohchi, T., and Lagercrantz, U. * co-first
  • Journal Title: New Phytologists Volume: 印刷中 Issue: 2 Pages: 569-590
  • DOI: 10.1111/nph.14487
  • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
• [Journal Article] The Roles of the Sole Activator-Type Auxin Response Factor in Pattern Formation of Marchantia polymorpha (2017)
  • Author(s): Kato, H., Kouno, M., Takeda, M., Suzuki, H., Ishizaki, K., Nishihama, R., and Kohchi, T.
  • Journal Title: Plant and Cell Physiology Volume: 58 Issue: 10 Pages: 1642-1651
  • DOI: 10.1093/pcp/pcx095
  • Peer Reviewed
• [Journal Article] An adenylyl cyclase with a phosphodiesterase domain in basal plants with a motile sperm system (2017)
  • Author(s): Kasahara, M., Suetsugu, N., Urano, Y., Yamamoto, C., Ohmori, M., Takada, Y., Okuda, S., Nishiyama, T., Sakayama, H., Kohchi, T., and Takahashi, F.
  • Journal Title: Sci. Rep. Volume: 6 Issue: 6 Pages: 39232-39232
  • DOI: 10.1080/09168451.2017.1285688
  • Peer Reviewed / Open Access
• [Journal Article] Evolutionary origin of phytochrome responses and signaling in land plants (2017)
  • Author(s): Inoue, K., Nishihama, R., and Kohchi, T.
  • Journal Title: Plant Cell Environ. Volume: 印刷中 Issue: 11 Pages: 2502-2508
  • DOI: 10.1111/pce.12908
  • Peer Reviewed
• [Journal Article] Marchantia polymorpha; Taxonomy, Phylogeny and Morphology of a Model System (2016)
  • Author(s): Maski Shimamur
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 230-256
  • DOI: 10.1093/pcp/pcv192
  • Peer Reviewed / Open Access / Acknowledgement Compliant
• [Journal Article] Evolutionary analysis of iron (Fe) acquisition system in Marchantia polymorpha. (2016)
  • Author(s): Lo, J.C., Tsednee, M., Yang, S.C., Hu, J.M., Ishizaki, K., Kohchi, T., Lee, D.C. and Yeh, K.C.
  • Journal Title: New Phytologist Volume: 221 Issue: 2 Pages: 569-583
  • DOI: 10.1111/nph.13922
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] An evolutionary conserved plant RKD factor controls germ cell differentiation. (2016)
  • Author(s): Koi, S., Hisanaga, T., Sato, K., Shimamura, M., Yamato, K.T., Ishizaki, K., Kohchi, T. and Nakajima, K.
  • Journal Title: Current Biology Volume: 26 Issue: 13 Pages: 1775-1781
  • DOI: 10.1016/j.cub.2016.05.013
  • Peer Reviewed / Open Access
• [Journal Article] Phytochrome signaling is mediated by PHYTOCHROME INTERACTING FACTOR in the liverwort Marchantia polymorpha (2016)
  • Author(s): Inoue, K., Nishihama, R., Kataoka, H., Hosaka, M., Manabe, R., Nomoto, M., Tada, Y., Ishizaki, K., and Kohchi, T.
  • Journal Title: Plant Cell Volume: 28 Issue: 6 Pages: 1406-1421
  • DOI: 10.1105/tpc.15.01063
  • Peer Reviewed / Acknowledgement Compliant
• [Journal Article] RPT2/NCH1 subfamily of NPH3-like proteins is essential for the chloroplast accumulation response in land plants (2016)
  • Author(s): Suetsugu, N., Takemiya, A., Kong, S.-G., Higa, T., Komatsu, A., Shimazaki, K. Kohchi, T. and Wada, M.
  • Journal Title: Proc. Natl. Acad. Sci. USA Volume: 113 Issue: 37 Pages: 10424-10429
  • DOI: 10.1073/pnas.1602151113
  • NAID: 120005829445
  • Peer Reviewed
• [Journal Article] Conditional Gene Expression/Deletion Systems for Marchantia polymorpha using its own Heat-shock Promoter and Cre/loxP-Mediated Site-Specific Recombination (2016)
  • Author(s): Ryuichi Nishihama, Sakiko Ishida, Hiroko Urawa, Yasuhiro Kamei, and Takayuki Kohchi
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 271-280
  • DOI: 10.1093/pcp/pcv102
  • Peer Reviewed / Open Access / Acknowledgement Compliant
• [Journal Article] The Naming of Names: Guidelines for Gene Nomenclature in Marchantia (2016)
  • Author(s): Bowman, J., Araki, T., Arteaga-Vazquez, M., Berger, F., Dolan, L., Haseloff, J., Ishizaki, K., Kyozuka, J., Lin, S.S., Nagasaki, H., Nakagami, H., Nakajima, K., Nakamura, Y., Ohashi-Ito, K., Sawa, S., Shimamura, M., Solano, R., Tsukaya, H., Ueda, T., Watanabe, Y., Yamato, K.T., Zachgo, S., and Kohchi, T.
  • Journal Title: Plnat cell Physiology Volume: 57 Issue: 2 Pages: 257-261
  • DOI: 10.1093/pcp/pcv193
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Molecular Genetic Tools and Techniques for Marchantia polymorpha Research (2016)
  • Author(s): Kimitsune Ishizaki, Ryuichi Nishihama, Katsuyuki T. Yamato and Takayuki Kohchi
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 262-270
  • DOI: 10.1093/pcp/pcv097
  • Peer Reviewed / Open Access / Acknowledgement Compliant
• [Journal Article] Transcriptional Framework of Male Gametogenesis in the Liverwort Marchantia polymorpha L. (2016)
  • Author(s): Asuka Higo, Masaki Niwa, Katsuyuki T. Yamato, Lixy Yamada, Hitoshi Sawada, Tomoaki Sakamoto, Tetsuya Kurata, Makoto Shirakawa, Motomu Endo, Shuji Shigenobu, Katsushi Yamaguchi, Kimitsune Ishizaki, Ryuichi Nishihama, Takayuki Kohchi, and Takashi Araki
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 325-338
  • DOI: 10.1093/pcp/pcw005
  • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
• [Journal Article] Profiling and Characterization of Small RNAs in the Liverwort, Marchantia polymorpha, Belonging to the First Diverged Land Plants (2016)
  • Author(s): Masayuki Tsuzuki, Ryuichi Nishihama, Kimitsune Ishizaki, Yukio Kurihara, Minami Matsui, John L. Bowman, Takayuki Kohchi, Takahiro Hamada, and Yuichiro Watanabe
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 359-372
  • DOI: 10.1093/pcp/pcv182
  • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
• [Journal Article] Identification of miRNAs and their Targets in the Liverwort Marchantia polymorpha by Integrating RNA-Seq and Degradome Analyses (2016)
  • Author(s): Pin-Chun Lin, Chia-Wei Lu, Bing-Nan Shen, Guan-Zong Lee, John L. Bowman, Mario A. Arteaga-Vazquez, Li-Yu Daisy Liu, Syuan-Fei Hong, Chu-Fang Lo, Gong-Min Su, Takayuki Kohchi, Kimitsune Ishizaki, Sabine Zachgo, Felix Althoff, Mizuki Takenaka, Katsuyuki T. Yamato, Shih-Shun Lin
  • Journal Title: Plant and Cell Physiology Volume: 57(2) Issue: 2 Pages: 339-358
  • DOI: 10.1093/pcp/pcw020
  • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
• [Journal Article] RSL class I genes controlled the development of epidermal structures in the common ancestor of land plants. (2016)
  • Author(s): Proust, H., Honkanen, S., Jones, V.A., Morieri, G., Prescott, H., Kelly, S., Ishizaki, K., Kohchi, T. and Dolan, L.
  • Journal Title: Current Biology Volume: 26 Issue: 1 Pages: 93-99
  • DOI: 10.1016/j.cub.2015.11.042
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Auxin-mediated transcriptional system with a minimal set of components is critical for morphogenesis through the life cycle in Marchantia polymorpha (2015)
  • Author(s): Kato, H., Ishizaki, K., Kouno, M., Shirakawa, M., Bowman, J.L., Nishihama, R., and Kohchi, T.
  • Journal Title: PLOS Genet. Volume: In press Issue: 5 Pages: e1005084-e1005084
  • DOI: 10.1371/journal.pgen.1005084
  • NAID: 120005672595
  • Peer Reviewed / Open Access
• [Journal Article] Phytochrome-mediated regulation of cell division and growth during regeneration and sporeling development in the liverwort Marchantia polymorpha (2015)
  • Author(s): Nishihama, R., Ishizaki, K., Hosaka, M., Matsuda, Y., Kubota, A., and Kohchi, T.
  • Journal Title: J. Plant Res. Volume: 128 Issue: 3 Pages: 407-421
  • DOI: 10.1007/s10265-015-0724-9
  • Peer Reviewed / Acknowledgement Compliant
• [Journal Article] Development of Gateway binary vector series with four different selection markers for the liverwort Marchantia polymorpha. (2015)
  • Author(s): Ishizaki, K., Nishihama, R., Ueda, M., Inoue, K., Ishida, S., Nishimura., Y., Shikanai, T., Kohchi, T
  • Journal Title: PLoS ONE Volume: 10 Issue: 9 Pages: e0138876-e0138876
  • DOI: 10.1371/journal.pone.0138876
  • NAID: 120005715313
  • Peer Reviewed / Open Access
• [Journal Article] Auxin produced by the IPA pathway is essential for liverwort development and acts as an evolutionary conserved regulator of dormancy in land plants (2015)
  • Author(s): Eklund, D. M., Ishizaki, K., Flores-Sandoval, E., Kikuchi, S., Takebayashi, Y., Tsukamoto, S., Hirakawa, Y., Kato, H., Kouno, M., Bhalerao, R. P., Lagercrantz, U., Kasahara, H., Kohchi, T., Bowman, J. L.
  • Journal Title: Plant Cell Volume: 27 Pages: 1650-1669
  • Peer Reviewed / Open Access / Int'l Joint Research
• [Journal Article] Stomatal guard cells co-optedan ancient ABA-dependent desiccation survival system to regulate stomatal closure (2015)
  • Author(s): Lind, C., Dreyer, I., López-Sanjurjo, E.J., von Meyer, K., Ishizaki, K., Kohchi, T., Lang, D., Zhao, Y., Kreuzer, I., Al-Rasheid, K.A.S., Ronne, H., Reski, R., Zhu, J.K., Geiger, D. and Hedrich, R.
  • Journal Title: Current Biology Volume: 30 Issue: 7 Pages: 928-935
  • DOI: 10.1016/j.cub.2015.01.067
  • Peer Reviewed / Open Access
• [Journal Article] Diversification of histone H2A variants during plant evolution (2015)
  • Author(s): Kawashima, T., Lorković, Z. J., Nishihama, R., Ishizaki, K., Axelsson, E., Yelagandula, R., Kohchi, T., Berger, F.
  • Journal Title: Tren. Plant Sci. Volume: 20 Issue: 7 Pages: 419-425
  • DOI: 10.1016/j.tplants.2015.04.005
  • Peer Reviewed / Int'l Joint Research
• [Journal Article] Spores of Relictual Bryophytes: Diverse Adaptations to Life on Land (2015)
  • Author(s): Brown, R. C., Lemmon, B. E., Shimamura, M., Villarreal, J. C., & Renzaglia, K. S.
  • Journal Title: Rev. Palaeobot. Palynol. Volume: 216 Pages: 1-17
  • DOI: 10.1016/j.revpalbo.2015.01.004
  • Peer Reviewed
• [Journal Article] Phototropin encoded by a single-copy gene mediates chloroplast photorelocation movements in the liverwort Marchantia polymorpha (2014)
  • Author(s): Komatsu, A., Terai, M., Ishizaki, K., Suetsugu, N., Tsuboi, H., Nishihama, R., Yamato, K.T., Wada, M., and Kohchi, T.
  • Journal Title: Plant Physiol. Volume: 166 Issue: 1 Pages: 411-427
  • DOI: 10.1104/pp.114.245100
  • Peer Reviewed / Open Access
• [Journal Article] CRISPR/Cas9 Mediated Targeted Mutagenesis in the Liverwort Marchantia polymorpha L. (2014)
  • Author(s): Shigeo S. Sugano, Makoto Shirakawa, Junpei Takagi, Yoriko Matsuda, Tomoo Shimada, Ikuko Hara-Nishimura, Takayuki Kohchi
  • Journal Title: Plant Cell Physiology Volume: 55(3) Issue: 3 Pages: 475-81
  • DOI: 10.1093/pcp/pcu014
  • Peer Reviewed / Open Access
• [Journal Article] Co-option of a photoperiodic growth-phase transition system during land plant evolution. (2014)
  • Author(s): Akane Kubota, Shogo Kita, Kimitsune Ishizaki, Ryuichi Nishihama, Katsuyuki T. Yamato, Takayuki Kohchi
  • Journal Title: Nature Communications Volume: 5 : 3668 Issue: 1 Pages: 3668-3668
  • DOI: 10.1038/ncomms4668
  • Peer Reviewed
• [Journal Article] Essential role of the E3 ubiquitin ligase NOPPERABO1 for schizogerlous intercellular space formation in the liverwort Merchntia polrmorpha. (2013)
  • Author(s): Kimitsune Ishizakia, Miya Mizutania(第一共著者), Masaki Shimamura, Akihide Masuda, Ryuichi Nishihamaa and Takayuki Kohchi
  • Journal Title: Plant Cell Volume: 25 Issue: 10 Pages: 4075-4084
  • DOI: 10.1105/tpc.113.117051
  • Peer Reviewed
• [Journal Article] Evolutionary insights into photoregulation of the cell cycle in the green lineage (2013)
  • Author(s): Nishihama, R and Kohchi, T
  • Journal Title: Curr. Opinion Plant Biol Volume: 16 Issue: 5 Pages: 630-637
  • DOI: 10.1016/j.pbi.2013.07.006
  • Peer Reviewed
• [Presentation] Gibberellin-independent functional conservation of DELLA protein in the basal land plant Marchantia polymorpha (2018)
  • Author(s): 孫ルイ,井上佳祐,楠竜之介,山岡尚平, 西浜竜一,河内孝之
  • Organizer: 第59回日本植物生理学会年会
• [Presentation] ゼニゴケ・ゲノムにおける植物ホルモン生合成・シグナル伝達系遺伝子 (2018)
  • Author(s): 山岡尚平, 西浜 竜一, 石崎公庸, 大和勝幸, 河内孝之
  • Organizer: 日本農芸化学会2017年度大会
• [Presentation] The sole auxin receptor gene MpTIR1 is dispensable for cell survival but required for development in the liverwort Marchantia polymorpha (2018)
  • Author(s): 鈴木秀政, 加藤大貴, 山岡尚平, 西浜 竜一、河内 孝之
  • Organizer: 日本農芸化学会2017年度大会
• [Presentation] Light regulated reproduction in Marchantia polymorpha (2018)
  • Author(s): Takayuki Kohchi
  • Organizer: International Symposium on Plant Photomorphogenesis
  • Int'l Joint Research / Invited
• [Presentation] Analysis of MpTIR1-mediated auxin reception and its physiological roles in the liverwort Marchantia polymorpha (2017)
  • Author(s): 鈴木秀政, 加藤大貴, 山岡尚平, 西浜 竜一、河内 孝之
  • Organizer: 日本農芸化学会2016年度大会
  • Place of Presentation: 京都女子大学
  • Year and Date: 2017-03-18
• [Presentation] ゼニゴケの光屈性には成長段階に応じて異なる光シグナル伝達因子が関与する (2017)
  • Author(s): 小松愛乃，末次憲之，西浜竜一，石崎公庸，河内孝之
  • Organizer: 第58回日本植物生理学会年会@鹿児島
  • Place of Presentation: 鹿児島大学
  • Year and Date: 2017-03-16
• [Presentation] Evolution of light regulated reproductive growth in plants (2017)
  • Author(s): Takayuki Kohchi
  • Organizer: Asia and Oceania Conference on Photobiology
  • Int'l Joint Research / Invited
• [Presentation] 核オーキシンシグナリングによるゼニゴケ幹細胞機能調節 (2017)
  • Author(s): 鈴木秀政，加藤大貴，片山みなみ，灰庭瑛実，山岡尚平，西浜竜一，河内孝之
  • Organizer: 日本植物学会第81回大会
• [Presentation] Molecular genetics and genomics of the liverwort Marchantia polymorpha (2017)
  • Author(s): Takayuki Kohchi
  • Organizer: Taiwan-Japan Plant Biology 2017
  • Int'l Joint Research / Invited
• [Presentation] Marchantia polymorpha:a next-generation model for comparative developmental biology with a powerful platform of genome editing (2017)
  • Author(s): Takayuki Kohchi
  • Organizer: 50th Annual Meeting of the Japanese Society of Developmental Biologists
  • Invited
• [Presentation] Phytohormonal regulation of tissue dedifferentiation and cell-cycle re-entry during regeneration in the liverwort Marchantia polymorpha (2016)
  • Author(s): Sakiko Ishida, Shohei Yamaoka, Ryuichi Nishihama, Takayuki Kohchi
  • Organizer: Auxin 2016
  • Place of Presentation: 中国 三亜
  • Year and Date: 2016-10-20
  • Int'l Joint Research
• [Presentation] The single-copy auxin receptor gene MpTIR1 regulates various development and differentiation in the liverwort Marchantia polymorpha (2016)
  • Author(s): Hidemasa Suzuki, Hirotaka Kato, Shohei Yamaoka, Ryuichi Nishihama, Takayuki Kohchi
  • Organizer: Auxin 2016
  • Place of Presentation: 中国 三亜
  • Year and Date: 2016-10-20
  • Int'l Joint Research
• [Presentation] Roles of transcriptional auxin signaling in the liverwort Marchantia polymorpha (2016)
  • Author(s): Takayuki Kohchi, Hirotaka Kato, Hidemasa Suzuki, Minami Katayama, Masaru Kouno, Mayuko Takeda, Sakiko Ishida, Kimitsune Ishizaki, Ryuichi Nishihama
  • Organizer: Auxin 2016
  • Place of Presentation: 中国 三亜
  • Year and Date: 2016-10-20
  • Int'l Joint Research / Invited
• [Presentation] The single-copy auxin receptor gene MpTIR1 plays pivotal roles indevelopment of the liverwort Marchantia polymorpha (2016)
  • Author(s): Hidemasa Suzuki, Hirotaka Kato, Shohei Yamaoka, Ryuichi Nishihama, Takayuki Kohchi
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research
• [Presentation] Functional Analysis of the Gibberellin Signaling Module in the Liverwort Marchantia polymorpha (2016)
  • Author(s): Rui Sun, Keisuke Inoue, Ryunosuke Kusunoki, Ryuichi Nishihama, Shohei Yamaoka, Takayuki Kohchi
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research
• [Presentation] Identification of a Raf-like kinase involved in photosynthesis signaling in Marchantia polymorpha (2016)
  • Author(s): Eri Koide, Mika Terai, Yuko Nomura, Izumi Yotsui, Noriyuki Suetsugu, Hirofumi Nakagami, Ryuichi Nishihama, Takayuki Kohchi
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research
• [Presentation] Regulation of cell division pattern by the sole activator-type auxin response factor in Marchantia polymorpha (2016)
  • Author(s): Hirotaka Kato, Kimitsune Ishizaki, Ryuichi Nishihama, Dolf Weijers, Takayuki Kohchi
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research / Invited
• [Presentation] Shared regulatory factors for stem cell maintenance in the simple and complex meristems of land plants (2016)
  • Author(s): Ryuichi Nishihama, Yukie Monden, Hiroyuki Kirita, Kimitsune Ishizaki, Takayuki Kohchi
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research / Invited
• [Presentation] Genome and Genomics in Marchantia polymorpha (2016)
  • Author(s): Takayuki Kohchi, Katsuyuki Yamato, Kimitsune Ishizaki, Shohei Yamaoka, Ryuichi Nishihama, John Bowman
  • Organizer: EMBO Workshop New model systems for early land plant evolution
  • Place of Presentation: オーストリア メンデル研究所
  • Year and Date: 2016-06-22
  • Int'l Joint Research / Invited
• [Presentation] The liverwort, Marchantia polymorpha; A powerful model of basal land plants for plant science and biotechnology (2016)
  • Author(s): Kohchi, T.
  • Organizer: 2016 Annual meeting of the Korean Society for Plant Biotechnology
  • Place of Presentation: 韓国プサン
  • Year and Date: 2016-06-09
  • Int'l Joint Research / Invited
• [Presentation] Raf-type protein kinase-mediated photosynthesis signal transduction in the liverwort Marchantia polymorpha (2016)
  • Author(s): 西浜竜一、小出絵理、寺井三佳、野村有子、四井いずみ、末次憲之、中神弘史、河内孝之
  • Organizer: 日本植物生理学会
  • Place of Presentation: 岩手大学（盛岡市）
  • Year and Date: 2016-03-18
• [Presentation] 苔類ゼニゴケの青色光依存的背腹性決定における青色光受容体フォトトロピン下流因子の探索 (2016)
  • Author(s): 小松愛乃、芦原悠紀子、寺井三佳、末次憲之、西浜竜一、石崎公庸、河内孝之
  • Organizer: 日本植物生理学会
  • Place of Presentation: 岩手大学（盛岡市）
  • Year and Date: 2016-03-18
• [Presentation] 苔類ゼニゴケおける単一のオーキシン受容体遺伝子MpTIR1による 多面的な生長調節の解析 (2016)
  • Author(s): 鈴木秀政、加藤大貴、山岡尚平、西浜竜一、河内孝之
  • Organizer: 日本植物生理学会
  • Place of Presentation: 岩手大学（盛岡市）
  • Year and Date: 2016-03-18
• [Presentation] Multiple regualtions by a single phytochrome and a single phytochrome-interacting factor in Marchantia polymorpha (2015)
  • Author(s): Takayuki Kohchi
  • Organizer: Asia and Oceania Conference on Photobiology
  • Place of Presentation: Academia Sinica (Taiwan)
  • Year and Date: 2015-11-15
  • Int'l Joint Research / Invited
• [Presentation] Transcriptional activities and protein interactions of AUXIN RESPONSE FACTORs from Marchantia polymorpha (2015)
  • Author(s): 加藤大貴、鈴木秀政、山岡尚平、西浜竜一、石崎公庸、河内孝之
  • Organizer: 日本発生生物学会
  • Place of Presentation: 筑波大学（つくば市）
  • Year and Date: 2015-06-02
• [Presentation] 苔類ゼニゴケにおけるオーキシン受容メカニズムの解析 (2015)
  • Author(s): 加藤大貴、鈴木秀政、山岡尚平、西浜竜一、石崎公庸、河内孝之
  • Organizer: 第56回日本植物生理学会年会
  • Place of Presentation: 東京農業大学（東京都）
  • Year and Date: 2015-03-16 – 2015-03-18
• [Presentation] ゼニゴケのオーキシン応答転写因子ARF1は無性芽の細胞分裂パターンを制御する (2015)
  • Author(s): 神埜 勝、加藤大貴、武田真由子、石崎公庸、西浜竜一、河内孝之
  • Organizer: 第56回日本植物生理学会年会
  • Place of Presentation: 東京農業大学（東京都）
  • Year and Date: 2015-03-16 – 2015-03-18
• [Presentation] 苔類ゼニゴケにおけるオーキシン受容体MpTIR1の生理機能の解析 (2015)
  • Author(s): o鈴木秀政、加藤大貴、山岡尚平、西浜竜一、河内孝之
  • Organizer: 第56回日本植物生理学会年会
  • Place of Presentation: 東京農業大学（東京都）
  • Year and Date: 2015-03-16 – 2015-03-18
• [Presentation] ゼニゴケ研究地平への投射：オーキシン信号伝達を例に (2014)
  • Author(s): 河内孝之、加藤大貴、西浜竜一、大和勝幸、石崎公庸
  • Organizer: 第55回 日本植物生理学会年会
  • Place of Presentation: 富山大学（富山市）
  • Invited
• [Presentation] 苔類ゼニゴケにおける転写因子HY5を介した光形態形成制御機構 (2014)
  • Author(s): 竹谷千尋、井上佳祐、石崎公庸、西浜竜一、河内孝之
  • Organizer: 第55回 日本植物生理学会年会
  • Place of Presentation: 富山大学（富山市）
• [Presentation] 苔類ゼニゴケにおける頂端細胞の選択を介した青色光依存的な背腹性決定機構 (2014)
  • Author(s): 芦原悠紀子、小松愛乃、西浜竜一、石崎公庸、河内孝之
  • Organizer: 第55回 日本植物生理学会年会
  • Place of Presentation: 富山大学（富山市）
• [Presentation] 転写因子の相互作用によるゼニゴケのオーキシン信号伝達ネットワーク (2014)
  • Author(s): 加藤大貴、神埜勝、白川一、石崎公庸、西浜竜一、河内孝之
  • Organizer: 第55回 日本植物生理学会年会
  • Place of Presentation: 富山大学（富山市）
• [Presentation] ゼニゴケ気室の発生初期段階ではNOPPERABO1のE3ユビキチンリガーゼ活性が必須である (2014)
  • Author(s): 水谷未耶、石崎公庸、増田晃秀、嶋村正樹、西浜竜一、河内孝之
  • Organizer: 第55回 日本植物生理学会年会
  • Place of Presentation: 富山大学（富山市）
• [Presentation] ゼニゴケフォトトロピンMpphotの光受容とキナーゼ活性に関する生化学的解析 (2013)
  • Author(s): 寺井三佳、小松愛乃、芦原悠紀子、直原一徳、徳富哲、西浜竜一、河内孝之
  • Organizer: 日本植物学会大会
  • Place of Presentation: 北海道大学（札幌市）
• [Presentation] ゼニゴケ類の雄器床・雌器床の機能について (2013)
  • Author(s): 嶋村正樹、岸本優伽
  • Organizer: 日本植物学会第77回大会
  • Place of Presentation: 北海道大学（札幌市）
• [Presentation] コケ植物の中心体システム (2013)
  • Author(s): 嶋村正樹
  • Organizer: 日本動物学会第84 回大会
  • Place of Presentation: 岡山大学（岡山市）
  • Invited
• [Presentation] 陸上植物の紡錘体形成の多様性 (2013)
  • Author(s): 嶋村正樹
  • Organizer: 第36回日本分子生物学会年会
  • Place of Presentation: 神戸国際会議場（神戸市）
  • Invited
• [Remarks] 京都大学生命科学研究科遺伝子特性学分野
  • URL: http://www.plantmb.lif.kyoto-u.ac.jp/
• [Remarks] ゼニゴケゲノムデータベース MarpolBase
  • URL: http://marchantia.info/
• [Remarks] 京都大学生命科学研究科 遺伝子特性学分野
  • URL: http://www.plantmb.lif.kyoto-u.ac.jp/
• [Remarks] ゼニゴケゲノムデータベース
  • URL: http://marchantia.info
• [Remarks] 京都大学生命科学研究科 遺伝子特性学分野 紹介動画
  • URL: http://www.lif.kyoto-u.ac.jp/j/?post_type=labos&p=152
• [Remarks] 日本（京都大学）発のモデル生物 ゼニゴケ
  • URL: http://www.kyoto-u.ac.jp/ja/research/events_news/department/seimei/news/2015/160315_1.html
• [Remarks] 京都大学生命科学研究科遺伝子特性学分野ウェブページ
  • URL: http://www.plantmb.lif.kyoto-u.ac.jp/
• [Remarks] 陸上植物の季節に依存して花を咲かせる仕組みの起源を紐解く（京都大学ホームページ）
  • URL: http://www.kyoto-u.ac.jp/ja/news_data/h/h1/news6/2014/140414_2.htm
• [Remarks] 陸上植物の季節に依存して花を咲かせる仕組みの起源を紐解く（研究科ホームページ）
  • URL: http://www.lif.kyoto-u.ac.jp/j/modules/research/content0044.html