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Phylogenetic analysis of organisms based on the sequence date of the mitochondrial DNA from both extince and extant taxa.

Research Project

Project/Area Number 04454033
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Stratigraphy/Paleontology
Research InstitutionNagoya University

Principal Investigator

OZAWA Tomowo  School of Science, Earth and Planetary Sciences, Associate Professor, 理学部, 助教授 (80037233)

Co-Investigator(Kenkyū-buntansha) ITOIGAWA Junji  Honary, Professor, 名誉教授 (90022566)
Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1993: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1992: ¥4,800,000 (Direct Cost: ¥4,800,000)
KeywordsFossil DNA / mitochondrial DNA / nucleotide sequence / Mammoth / Mammalia / Gastropoda / Umbonium / Phylogeny / 分子系統樹 / 分子進化学 / 新生代 / 更新世
Research Abstract

In order to make phylogenetic analysis of organisms including both extinct and extant taxa, DNA was extracted from a number of samples of fossil and living mammals and molluscs. Especially, DNA was successfully extraxcted from several fossil samples of wooly mammoth (Mammuthus primigenius) ocurred from the Upper Pleistocene depostis (53000-10000 yr. BP) in Siberia. Using the primers complementary to conserved regions of the mitochondrail Cytochrome bgene, a 307 base pair fragment flanked by the primers L14841 and H15149 was amplified using polynesase chain reaction (PCR). The PCR producs were sequenced using the dideoxy sequencing method, along with the cloning method. The amplified fossil DNA did not arise from contamination from an outside source by comparison with the sequence of the extant species of the Ekephantidae. The molecular phylogenetic trees of extinct and extant Elephgantid taxa suggested that the wooly mammoth was more closely retated to the African elephant than the Asian elehant, although the manmmoth and Asian elephant formed a sister group relationship in the traditional phylogenetic trees based on the morphologic characters.
In this project, the evolutionary relationships of the species of Umbonium (Suchium) [Mollusca ; Gastropoda] were also studied by using paleontologic and molecular methods. The nucleotide sequences of homologuous regions of mitochondrial DNAs derived from five living species were determined and phylogenetic trees were constructed. The compa ; rison of molecular and morphologic phylogenetic trees revealed that the phylogenetic tree based onb the morphologic data did not show the clade but do the grade.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] 小澤智生: "メッセージfrom太古-甦る古生物の遺伝子-" 化学工学. 58. 56-57 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小澤智生: "化石DNAからみたマンモスの系統的位置" 遺伝. 48. 6-7 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小澤智生: "古生物学的ならびに分子系統学的アプローチの統合による系統進化学の新しい展開-腹足類を例として-" 月刊地球. 15. 589-595 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小澤智生: "逗子動物群-日本の後期中新世-鮮新世暖流系動物群" 瑞浪市化石博物館研究報告. 19. 427-439 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Itoigawa,Junji: "Miocene paleogeography of the Mizunami Group of the Tono region,central Japan" Palaeogeography,Palaeoclimatology,Palaeoecology. 100. 209-215 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kodama,Kazuto: "Clockwise tectonic rotation of Tertiary sedimentary basins in central Hokkaido,northern Japan" Geology. 21. 431-434 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Takayanagi,Y.: "Studies in Benthic Foraminifera" Tokai University Press, 440 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ozawa, T.and Okamoto, K.: "New development of phylogenitic stdies by integrating the paleontologic and moleculr approaches with an example of phylogenetic study of the marine gastropods" Chikyuu(Earth). Vol.15, No.9. p.589-595 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ozawa, T: "Message from ancient times revivify the genes from extinct organisms" Chemical Technology (Kagaku Kogaku). Vol.58, No.4. p56-57 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ozawa, T.and Hayashi, S.(in press): "Phylogenetic position of wooly mammoth viewed from the fossil DNA" Heredity(Iden). Vol.48. p.6-7 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Mizutani, S.and Ozawa, T.: "Paleozoic-Mesozoic tectonics of the Akioshi and Mino Terranes in the Inner Zone of Southwest Japan" In A century of gelolgy of Japan (special issue of Geol.Soc.Japan). p.193-202 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kodama, K., Takeuchi, T.and Ozawa, T.: "Clockwise tectonic rotation of Tertiary sedimentary basins in central Hoddaido, northern Japan" Geolgy. Vol.21. p.431-434 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ozawa, T., Watanabe, K., and Kobayashi, F.: "Morphologic evolution in some Schwagerinid and Schubertellid lineages and the definition of the Carboniferous Permian boundary" Studies in Benthick Foraminifera. Tokai Univ.Press. p.389-401 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ozawa, T.and Tomida, S.: "The Zushi Gauna Late Miocene Early Pliocene warm marine water molluscan fauna of Japan" Bull, Mizunami Fossil Mus.No.19. p.427-439 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Itogawa, J.: "Miocene palelogeography of the Mizunami Group of the Tono region, central Japan" Palaeogeography. Vol.100. p.209-215 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小澤智生: "メッセージfrom太古-甦る古生物の遺伝子" 化学工学. 58. 56-57 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 小澤智生: "化石DNAからみたマンモスの系統的位置" 遺伝. 48. 6-7 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 小澤智生: "古生物学的ならびに分子系統学的アプローチの統合による系統進化学の新しい展開" 月刊地球. 15. 589-595 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Kodama,Kazuto: "Clockwise tectonic rotation of Tertiary sedimentary basins in central Hokkaido,northern Japan" Geology. 21. 431-434 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 杉山和弘: "三重県志摩半島東部のジェラ系白根崎層(新称)および白亜系松尾層群の層序と放散虫化石" 大阪微化石研究会誌. 特別号9号. 1-7 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 端山好和: "日本の地質学100年" 日本地質学会, 706 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 小澤 智生・冨田 進: "逗子動物群ー日本の後期中新世〜前期鮮新世暖流系動物群" 瑞浪市化石博物館研究報告. 19. 201-213 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Ozawa,T.,Watanabe,K.and Kobayashi,F. in Takayanagi,Y and Saito,T.(eds.): "Studies in Benthic Foraminifera Proceeding of the 4th International Symposium on Benthic Foraninifera,sendai,1990" Tokai Univ.Press, 440 (1992)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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