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The development of a new method for specific cleavage of lignin beta-ether linkage by genetic engineering.

Research Project

Project/Area Number 04454088
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 林産学
Research InstitutionTokyo University of Agriculture & Technology

Principal Investigator

KATAYAMA Yoshihiro  Tokyo University of Agriculture & Technology, Center for Cooperative Research, Associate Professor., 共同研究開発センター, 助教授 (10214339)

Co-Investigator(Kenkyū-buntansha) KAWAI Shinya  Tokyo University of Agriculture & Technology, Faculty of Agriculture, Assistant, 農学部, 助手 (90202027)
Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 1993: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1992: ¥5,200,000 (Direct Cost: ¥5,200,000)
KeywordsLignin biodegradation / beta-Arylether linkage / beta-Etherase / Calpha-Dehydrogenase / DNA sequence / Gene function / Glutathione-S-transferase / Glutahione / β-エーテラーゼ / β-エーテル結合 / 遣伝子機能 / 塩基配列 / 酵素機能領域 / NAD-結合部位
Research Abstract

Lignin is the most abundant aromatic material in the biosphere. It is a polymer constructed with phenylpropanoid units. In the structure, beta-arylether linkage is the most aboundant (approximately 50 %). Cleavage of beta-arylether is the most important process in lignin biodegradation. We already isolated Pseudomonas paucimobilis which was able to degrade beta-aryl eher linkage. And we deteced beta-etherase acivity in the cellular membrane fraction.
In this research program, we try to establish a specific modification process constructed with gene functions of lignin degradable P.paucimobilis by genetic engineering. At first, we isolated the beta-etherase gene which contains an open reading frame of 843 bp. This gene was expressed in Escherichia coli, and the enzyme had the same properies as the P.paucimobilis enzyme. The substrate specificity of beta-etherase is a beta-aryl ether that contains a carbonyl group at the Calpha-position. In P.paucimobilis, Calpha-dehydrogenase catalyzes the oxidation of alcohol group at the Calpha-position of beta-arylether compound. Then, we isolated the Calpha-dehydrogenase gene. This gene contains an open reading frame of 915 bp and located in 1 kbp upstream of the beta-etherase gene. This gene was wxpressed in E.coli, and the enzyme had the same properies as the P.paucimobilis enzme.
We idenified another beta-etherase gene, which lies between two genes described above. The beta-etherase activity of the new gene expresed in E.coli was more than 200 times as high as that of P.paucimoblis. These two beta-etherase genes are homologus to gultathion-S-transferase, and upon addtion of glutahione a remarkable acceleration of beta-etherase activity was observed in the E.coli carrying the beta-etherase gene.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] E.Masai,Y.Katayama,他4名: "A bacterial enzyme degrading the model lignin compound β-etherase is a member of the glutathinoe-S-transferase superfamily" FEBS LETTERS. 323. 135-140 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] E.Masai,S.Kubota,Y.Katayama 他3名: "Characterization of the Cα-Dehydrogenase Gene Involved in the Cleavage of β-Aryl Ether by Pseudomonas paucimobilis." Bioscience Biotechnology Biochemistry. 57. 1655-1659 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] E.Masai, Y.Katayama, et al.: "A bacterial enzyme degrading the model lignin compound beta-etherase is a member of the glutathione-S-transferase superfamily" FEBS LETTERS. Vol.323. 135-140 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] E.Masai, S.Kubota, Y.Katayama et al.: "Characterization of the Calpha-dehydrogenase gene involved in the cleavage of beta-aryl ether by Pseudomonas paucimobilis" Biosci.Biotech.Biochem.Vol.57. 1655-1659 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] E.Masai,Y.Katayama,他4名: "A bacterial enzyme degrading the model lignin compound β-etherase is a member of the glutathione-S-transferase superfamily" FEBS LETTERS. 323. 135-140 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] E.Masai,S.Kubota,Y.Katayama他3名: "Characterization of the Cα-Dehydrogenase Gene Involved in the Cleavage of β-Aryl Ether by Pseudomonas paucimobilis." Bioscience Biotechnology Biochemistry. 57. 1655-1659 (1993)

    • Related Report
      1993 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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