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The development of a new HLA-DNA typing method using DNA direct sequencing.

Research Project

Project/Area Number 04557031
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Legal medicine
Research InstitutionNagoya University

Principal Investigator

KATSUMATA Yoshinao  Nagoya University, Medicine, Professor, 医学部, 教授 (30109326)

Co-Investigator(Kenkyū-buntansha) UCHIHI Reiko  Nagoya University, Medicine, Assistant Professor, 医学部, 助手 (20223571)
Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥5,900,000 (Direct Cost: ¥5,900,000)
Fiscal Year 1993: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1992: ¥4,700,000 (Direct Cost: ¥4,700,000)
KeywordsHLA / PCR / Direct Sequence / Forensic Specimens / 法医鑑識 / 親子鑑定 / 犯罪捜査 / 白血球型 / 血液型 / 遺伝子増幅 / 塩基配列直接解読 / 蛍光標識プローブ
Research Abstract

Highly polymorphic human leukocyte antigen (HLA), which is related to cellular immunoreaction, is useful for personal identification in the field of forensic medicine. To date, HLA class II loci are typed by restriction enzymes or sequence-specific oligonucleotide probes after being amplified by the polymerase chain reaction (PCR). Such procedures are usually complicated and time consuming. Therefore, direct sequencing of the amplified DNA could provide a rapid typing method. However, forensic specimens such as bloodstains, seminal stains, saliva stains and hairs usually contains contaminants which may inhibit PCR reaction. In this study, we tried to analyze the nature of the contaminants, and to minimize the effect of those substances. In hair, we found that melanin is a potent inhibitor for the PCR reaction, and are now trying to minimize the effect of this substances. In bloodstains and saliva stains, we tried to control the inhibition of the contaminated substances, and finally made an improved procedure of DNA purification and typing.
So, we started to read the sequence of HLA-DQB1 gene with DNA sequencer.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] Uchihi,R.et al.: "Deoxyribonucleic acid(DNA)typing of human leukocyte antigen(HLA)-DQA1 from single hairs in Japanese." Journal of Forensic Sciences. 37(3). 853-859 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 玉木敬二ら: "医学におけるバイオテクノロジー(17)-DNAによる個人識別法-." 現代医学. 40(1). 169-174 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Okajima,H.et al.: "Amplification of HLA-DQA1 gene from bloodstains by polymerase chain reaction." Japanese Journal of Legal Medicine. 47(1). 6-12 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小島俊典ら: "唾液斑痕を試料としたHLAクラスII遺伝子のDNA型判定." 日本法医学雑誌. 47(5). 380-386 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Rieko Uchihi, Keiji Tamaki, Toshinori Kojima, Toshimichi Yamamoto and Yoshinao Katsumata: "Deoxytibonucleic acid (DNA) typing of human leukocyte antigen (HLA)-DQA1 from single hairs in Japanese." Journal of Forensic Sciences. 37(3). 853-859 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Keiji Tamaki, Rieko Uchihi and Yoshinao Katsumata: "Biotechnology in medicine (17)-Personal identification by DNA-" Gendaiigaku. 40(1). 169-174 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hiroshi Okajima, Toshimichi Yamamoto, Toshinori Kojima, Rieko Uchihi and Yoshinao Katsumata: "Amplification of HLA-DQA1 gene from bloodstains by polymerase chain reaction." Japanese Journal of Legal Medicine. 47(1). 6-12 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Toshinori Kojima, Rieko Uchihi, Toshimichi Yamamoto, Keiji Tamaki and Yoshinao Katsumata: "DNA typing of the three HLA-class II loci from saliva stains." Japanese Journal of Legal Medicine. 47(5). 380-386 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Uchihi,R.et al.: "Deoxyribonucleic acid(DNA)typing of human leukocyte antigen(HLA)-DQA1 from single hairs in Japanese." Journal of Forensic Sciences. 37(3). 853-859 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] 玉木敬二ら: "医学におけるバイオテクノロジー(17)-DNAによる個人識別法-." 現代医学. 40(1). 169-174 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] Okajima,H.et al.: "Amplification of HLA-DQA1 gene from bloodstains by polymerase chain reaction." Japanese Journal of Legal Medicine. 47(1). 6-12 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 小島俊典ら: "唾液斑痕を試料としたHLAクラスII遺伝子のDNA型判定." 日本法医学雑誌. 47(5). 380-386 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 玉木 敬二: "日本におけるバイオテクノロジー(17)ーDNAによる個人識別法ー" 現代医学. 40. 169-174 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 玉木 敬二: "MUR-PCR法を用いた日本人におけるDIS8(MS32)のタイピングとアリルの解析" 日本法医学雑誌. 46. 474-482 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Hiroshi Okajima: "Amplification of HLA-DQAI gene from bloodstaius by polymerase chain reaction" Jpn.J.Legal Med.47. 6-12 (1993)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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