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Biochemical and genetic study of the regulatory mechanism of the chromosomal DNA replication in Escherichia coli

Research Project

Project/Area Number 06454600
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Biological pharmacy
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

SEKIMIZU Kazuhisa  Faculty of Pharmaceutical Sciences, Professor, 薬学部, 教授 (90126095)

Co-Investigator(Kenkyū-buntansha) MIKI Takeyoshi  Faculty of Pharmaceutical Sciences, Associate Professor, 薬学部, 助教授 (40037586)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥6,700,000 (Direct Cost: ¥6,700,000)
Fiscal Year 1995: ¥2,900,000 (Direct Cost: ¥2,900,000)
Fiscal Year 1994: ¥3,800,000 (Direct Cost: ¥3,800,000)
KeywordsDnaA protein / DNA replication / chromosomal DNA / Escherichia coli. / ATP-binding / phospholipid / DNA topoisomerase / cell cycle / oriC / DNAポリメラーゼ / 脂質 / dnaA変異株 / ATPピリドキサール
Research Abstract

DnaA protein is the initiator of chromosomal DNA replication in Escherichia coli. The head investigator and colleagues showed that DnaA protein is activated by acidic phospholipids including cardiolipin. In this study, we examined the influcnce of mixed liposomes composed of two different synthetic lipids on the ATP-binding of DnaA protein. The result showed that the cluster structure of acidic lipid is necessary for the interaction of acidic lipid in the mixed membrane with DnaA protein. This finding suggests a new insight for the regulation of the activity of DnaA protein, the initiator protein of DNA replication, in the cycle of cell division. Namely, acidic phospholipids may form either the cluster of dispersd structures in cell membrane, and that structural alternation of lipid structure may be coupled with cell cycle and it activates DnaA protein resulting the initiation of DNA replication.
Further, we first reported the influence of DnaA protein on the supercoiled structure of double stranded DNA.We showed that DNA is more negatively supercoiled when the reaction of DNA topoisomerase was carried out in the presence of DnaA protein. This activity of DnaA protein was not dependent on sequence of DNA and was specifically inhibited by binding of DnaA protein to adenine nucleotide.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] T. Mizushima: "Loss of flagellation in dnaA mutants of Eschericha coli." J. Bacteriol.176. 5544-5546 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] S. Sasaki: "3-Acetoxy-2, 2'-bi-IH-indol as a novel inhibitor od ATP binding to DnaA. the protein initiating chromosomal replication in Escherichia coli." Bioorganic and Medicinal Chemistry Letters. 4. 1771-1774 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M. Hase: "Isolation and characterization of inhibitory factors of DNA polymerase III heloeuzyme from Escherichia coli." FEMS Microbiology Letters. 130. 215-220 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T. Shipuku: "Phenotypes of dnaA mutants of Escherichia coli sensitive to detergents and organic solvouts" Biochem. Biophys. Res. Commun.212. 84-89 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T. Katayama: "Characterization of Escherichia coli DnaAcos protein in replication systems reconstituted with highly parified proteins." Molecular Microbiology. 18. 813-820 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T. Mizushima: "Decrease in the linking number of plasmid DNA in dnaA mutants of Escherichia coli." Biophys. Biochem. Res. Commun. 218. 137-141 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Mizushima: "Loss of flagellation in dnaA mutants of Escherichia coli." J.Bacteriol. 176. 5544-5546 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] S.Sasaki: "3-Acetoxy-2,2'-bi-1H-indol as a novel inhibitor of ATP binding to DnaA,the protein initiating chromosomal replication in Escherichia coli." Bioorganic and Medicinal Chemistry Letters. 4. 1771-1774 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Hase: "Isolation and characterization of inhibitory factors of DNA polymerase III holoenzyme from Escherichia coli." FEMS Microbiology Letters. 130. 215-220 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Shinpuku: "Phenotypes of dnaA mutants of Escherichia coli sensitive to detergents and organic solvents." Biochem.Biophys.Res.Commun. 212. 84-89 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Katayama: "Characterization of Escherichia coli DnaAcos protein in replication systems reconstituted with highly purified proteins." Molecular Microbiology. 18. 813-820 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Mizushima: "Decrease in the linking number of plasmid DNA in dnaA mutants of Escherichia coli." Biophys.Biochem.Res.Commun. 218. 137-141 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Mizushima: "Influence of cluster formation of acidic phospholipids on decrease in the affinity for ATP of DnaA protein." J.Biol.Chem. 271. 3633-3638 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T. Mizushima, Y. Ishikawa, T. Katayama, T. Kunitake, E. Watanabe & K. Sekimizu: "Influence of cluster formation of acidic phospholipids on decrease in the affinity for ATP of DnaA protein" J. Biol. Chem. 271. 271(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] T. Mizushima, J. Tanino, T. Miki & K. Sekimizu: "Decrease in the linking number of plasmid DNA in dnaA mutants of Escherihica coli" Biophys. Biochem. Res. Commun. (in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] T. Katayama, E. Crook and K. Sekimizu: "Characterization of Eseherichia coli DnaA cos protein in replication systems reconstituted with highly purified proteins" Molecular Micorobiology. 18. 813-820 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] S. Takeda, K. Kita, H. Miyazaki, S. Natori and K. Sekimizu: "Purification of low-molecular-weight GTP-binding proteins structurally related to MTG 33. awitochondrial GTP-binding protei of Ehvlich ascites turcel" J. Biochem. (Tokyo). 118. 791-795 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Y. Sagara, K. Matsunaga, H. Aramaki, K. Sekimizu and T. Horiuchi: Biochimie. 77. 719-723 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] F. Saruta, T. Aoki, K. Sekimizu, S. Kojima and K. Kita: "Stage-specific isoforms of complex II (succinate-ubiquinone oxldote-ductase) in mitochondria from the parasitic neuatode, Ascaris suum" J. Biol. Chem.270. 928-932 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] T.Mizushima,S.Natori and K.Sekimizu: "Relaxation of supercoiled DNA associated with induction of heat shock proteins in Escherichia coli." Mol.Gen.Genet.238. 1-5 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] A.Tomura,T.Ishikawa,Y.Sagara T.Miki and K,Sekimizu: "Reguirement of phosphatidylglycerol for flagellation of Escherichia coli." FEBS Letters. 329. 287-290 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Ogata,T.Miki and K.Sekimizu: "Arole of heat shock proteins for homologous recombination in Escherichia coli." Biochem.Biophys.Res.Commun.197. 34-39 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] K.Sekimizu: "Interactions between DNA replication-related proteins and phospholipid vesicles in vitro." Chemistry and Physics of Lipids.73. 223-230 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Ogata.T.Mizushima,K.Kataoka,T.Miki and K Sekimizu: "Ideutification of DNA topoisomerases involved in immediate and transient DNA relaration induced by heat shock in Eschenichia coli." Mol.Gen.Genet.244. 451-455 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] T.Mizushima,A.Tomura,T.Shimpuku.T.Miki and K.Sekimizu: "Loss of flagellation in dnaA mutants of Escherichia coli." J.Bacteriol.176. 5544-5546 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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