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Screening of inhibitors of DNA replication by using the oriC plasmid replication system of Escherichia coli

Research Project

Project/Area Number 06557130
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section試験
Research Field Biological pharmacy
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

SEKIMIZU Kazuhisa  Faculty of Pharmaceutical Sciences, KYUSHU UNIVERSITY,Professor, 薬学部, 教授 (90126095)

Co-Investigator(Kenkyū-buntansha) KOBAYAKAWA Takahiro  Toshitomi Pharmaceutical Industries Ltd.Head of Discovery Research, 医薬研究部, 本部長
SASAKI Shigetaka  Faculty of Pharmaceutical Sciences, KYUSHU UNIVERSITY,Associate Professor, 薬学部, 助教授 (10170672)
MIKI Takeyoshi  Faculty of Pharmaceutical Sciences, KYUSHU UNIVERSITY,Associate Professor, 薬学部, 助教授 (40037586)
早川 敬博  吉富製薬株式会社, 医薬研究本部, 主任研究員
Project Period (FY) 1994 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥10,200,000 (Direct Cost: ¥10,200,000)
Fiscal Year 1996: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1995: ¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 1994: ¥5,000,000 (Direct Cost: ¥5,000,000)
KeywordsDnaA protein / DNA replication / chromosomal DNA / Escherichia coli. / ATP-binding / indigo / oriC plasmid / oriCプラスミド / DNA合成阻害剤 / 脂質クラスター / ovic複製 / oriC / DNAポリメラーゼ / 脂質 / dnaA変異株
Research Abstract

DnaA protein is the initiator of chromosomal DNA replication in Escherichia coli. The purpose of this study is a discovery of inhibitors of DNA replication in Escherichia coli by measurement of the inhibition of the ATP-binding to DnaA protein. Preliminary study by the group of the head investigator has shown that a derivative of indigo inhibits the ATP-binding activity of DnaA protein. In this study, we synthesized a number of indigo derivatives, and examined the relationship between their structures and inhibition of the ATP-binding to DnaA protein. We showed that alkyl residue is necessary for the activity. As a result, we could synthesize a compound which showed 50% inhibition at the concentration of 7muM.We further demonstrated that the compound specifically inhibited the initiation of DNA synthesis in an oriC plasmid DNA replication system. The results were published in J.Biol.Chem.in 1996.

Report

(4 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • 1994 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Tohru Mizushima,S.Sasaki,‥‥& Kazuhisa sekimizu: "Molecular Design of Inhibitors of in Vitro oriC DNA Replication Based on the Potential to Block the ATP Binding of DnaA Protein" The Journal of Biological Chemistry. 271. 25178-25183 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tohru Mizushima,Y.ishikawa,‥‥& Kazuhisa Sekimizu: "Influence of Cluster Formation of Acidic Phospholipids on Decrease in the Affinity for ATP of DnaA Protein" The Journal of Biological Chemistry. 271. 3633-3638 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tohru Mizushima,Tsutomu Katayama & Kazuhisa Sekimizu: "Effect on DNA Topology by DnaA Protein,the Initiation Factor of Chromosomal DNA Replication in Escherichia coli" Biochemistry. 35. 11512-11516 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tohru Mizushima,T.Shinpuku,‥‥& Kazuhisa Sekimizu: "Phenotypes of dnaA mutants of Escherichia coli sensitive to phenothiazine derivatives" Mol Gen Genet. 252. 212-215 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tsutomu Katayama,M.Takata & Kazuhisa Sekimizu: "The Nucleoid Protein H-NS Facilitates Chromosome DNA Replication in Escherichia coli dnaA Mutants" Journal of Bacteriology. 178. 5790-5792 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tohru Mizushima,J.Taino,T.Miki & Kazuhisa Sekimizu: "Decrease in the Linking Number of Plasmid DNA in dnaA Mutants of Escherichia coli" Biochemical and Biophysical Reserch Communications. 218. 137-141 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Mizushima, S.Sasaki, H.Ohishi, M.Kobayashi, T.Katayama, T.Miki, and K.Sekimizu: "Molecular design of inhibitors of in vitro oriC DNA replication based on the potential to block the ATP binding of DnaA protein." J.Biol.Chem.271. 25178-25183 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Mizushima, Y.Ishikawa, E.Obana, M.Hase, T.Kubota, T.Katayama, T.Kunitake, E.Watanabe, and K.Sekimizu: "Influence of cluster formation of acidic phospholipids on decrease in the affinity for ATP of DnaA protein" J.Biol.Chem.271. 3633-3638 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Mizushima, T.Katayama, and K.Sekimizu: "Effect on DNA topology by DnaA protein, the initiation factor of chromosomal DNA replication in Escherichia coli" Biochemistry. 35. 11512-11516 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Mizushima, T.Shinpuku, H.Katayama, K.Kataoka, L.Guo, T.Miki, and K.Sekimizu: "Phenotypes of dnaA mutants of Escherichia coli sensitive to phenothiazine derivatives" Mol.Gen.Genet.252. 212-215 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Katayama, M.Takata and k.Sekimizu: "The nucleoid protein H-NS facilitates chromosome DNA replication in Escherichia coli dnaA mutants" J.Bacteriol.178. 5790-5792 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Mizushima, J.Tanino, T.Miki, and K.Sekimizu: "Decrease in the linking number of plasmid DNA in dnaA mutants of Escherichia coli" Biochem.Biophys.Res.Commun.218. 137-141 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Tohru Mizushima,S.Sasaki,… & Kazuhisa Sekimizu: "Molecular Design of Inhibitors of in Vitro oriC DNA Replication Based on the Potential to Block the ATPB Binding of DnaA Protein" The Journal of Biological Chemistry. 271. 25178-25183 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tohru Mizushima,Y.Ishikawa,… & Kazuhisa Sekimizu: "Influence of Cluster Formation of Acidic Phospholipids on Decrease in the Affinity for ATP of DnaA Protein" The Journal of Biological Chemistry. 271. 3633-3638 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tohru Mizushima,Tsutomu Katayama & Kazuhisa Sekimizu: "Effect on DNA Topology by DnaA Protein,the Initiation Factor of Chromosomal DNA Replocation in Escherichia coli" Biochemistry. 35. 11512-11516 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tohru Mizushima,T.Shinpuku … & Kazuhisa Sekimizu: "Phenotypes of dnaA mutants of Escherichia coli sensitive to phenothiazine derivatives" Mol Gen Genet. 252. 212-215 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tsutomu Katayama,M.Takata & Kazuhisa Sekimizu: "The Nucleoid Protein H-NS Facilitates Chromosomo DNA Replication in Escherichia coli dnaA Mutants" Journal of Bacteriology. 178. 5790-5792 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tohru Mizushima,J.Tanino,T.Miki & Kazuhisa Sekimizu: "Dectease in the Linking Number of Plasmid DNA in dnaA Mutants of Escherichia coli" Biochemical and Biophysical Research Communications. 218. 137-141 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] T.Mizushima,Y.Ishikawa,T.Katayama,T.Kunitake,E.Watanabe & K.Sekimizu: "Influence of cluster formation of acidic phospholipids on decrease in the affinity for ATP of DnaA protein" J.Biol.Chem.271. 271(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] T.Mizushima,J.Tamino,T.Miki & K.Sekimizu: "Decrease in the linking number of phasmid DNA in dnaA mutants of Escherihica coli" Biophys,Biochen.Res.Commun. (in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] T.Katayama,E.Crook and K.Sekimizu: "Characterization of Escherichia coli DnaA cos protein in replication systems reconstituted with highly purified proteins" Molecular Micorobiology. 18. 813-820 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] S.Takeda,K.Kita,H.Miyazaki,S.Natori and K.Sekimizu: "Purification of low-molecular-weight GTP-binding proteins structurally related to MTG 33,amitochoudrial GTP-binding protein of Ehrlich ascites turncells" J.Biochem.(Tokyo). 118. 791-795 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Y.Sagara,K.Matsunaga,H.Aramaki,K.Sekimizu and T.Horiuchi: Biochimie. 77. 719-723 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] F.Saruta,T.Aoki,K.Sekimizu,S.Kojima and K.Kita: "Stage-specific isoforms of complex II(succinate-ubiquinone oxidoreductase) in mitochondria from the parasitic nenatode,Ascoris suum" J.Biol.Chem.270. 928-932 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] T.Mizushima,S.Natori and K.Sekimizu: "Relaxation of supercoiled DNA associated with induction of heat shock proteins in Escherichia coli." Mol.Gen. Genet. 238. 1-5 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] A.Tamura,T.Ishikawa,Y.Sagara,T.Miki and K.Sekimizu: "Requitement of phosphatidylglycerol for flagellation of Escharichia coli." FEBS Letters. 329. 287-290 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Ogata,T.Miki and K.Sekimizu: "Arole of heat shok proteins for homologous recombination in Escherichia coli." Biochem.Biophys.Res.Commun.197. 34-39 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] S.Sasaki,T.Mizushima,T.Hashimoto,M.Maeda and K.Sekimizu: "3-Ace toxy-2,2′-6i-3H-iudol as a novel inhibitor of ATP binding to DnaA,the protein initiating chromosomal replication in Escherichia coli." Bioorganic and Medicinal Chemistry Letters.4. 1771-1774 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Ogata,T.Mizushima,K.Kataoka,T.Miki and K.Sekimizu: "Ideutification of DNA topoisomerases in volved in immediate and trausient DNA relaxation induced by heat shocle in Escherichia coli." Mol.Gen.Genet.244. 451-455 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] T.Mizushima,A.Tomura,T.Shimpuku,T.Miki and K.Sekimizu: "Loss of flagellation in dneA mutants of Eschetichia coli." J. Bacteriol.176. 5544-5546 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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