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Study on the function of RNA0binding proteins of cyanobcteria and chloroplasts

Research Project

Project/Area Number 07454204
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionNagoya University

Principal Investigator

SUGITA Mamoru  Nagoya Univ., Center Gene Res.Associate Prof., 遺伝子実験施設, 助教授 (70154474)

Co-Investigator(Kenkyū-buntansha) HIROSE Tetsuro  Nagoya Univ., Center Gene Res.Assistant Prof., 遺伝子実験施設, 助手 (30273220)
杉浦 昌弘  名古屋大学, 遺伝子実験施設, 教授 (80027044)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥7,300,000 (Direct Cost: ¥7,300,000)
Fiscal Year 1996: ¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 1995: ¥3,800,000 (Direct Cost: ¥3,800,000)
Keywordschloroplast / RNA-binding protein / cyanobacteria / ribonucleoprotein particle / pre-mRNA processing / posttranscriptional regulation / mRNAプロセシング / 遺伝子破壊 / 遺伝子
Research Abstract

1. RNA-binding proteins, Rbp1 and Rbp2, of the unicellular cyanobacterium Synechococcus sp, strain PCC6301 are localized in cytosol and bind RNA molecules in vivo. To elucidate their functions, gene-disruption experiments were performed. The experiments indicated that disruption of rbpl gene is lethal while rbp2 gene is not essential under normal growth condition. We are currently identifying the target RNA species of Rbp proteins.
2. To clarify the function of chloroplast RNA-Binding proteins (cpRNPs), effect of the cpRNPs on pre-mRNA processing was assayd. When cpRNPs were removed from in vitro assay system, processing of pre-mRNA was enhanced. This suggests that cpRNPs may take part in mRNA processing as negative regulator.
3. cDNA2s encoding RNA-binding proteins, RZ-1 and RGP-3, have been isolated from a Nicotiana sylvestris cDNA library. The deduced amino acid sequences revealed that RZ-1 contains a consensus sequence-type RNA-binding domain (CS-RBD) and a zinc finger motif of the CCHC type, and RGP-3 has a CS-RBD and a short glycine-rich sequence. RZ-1 is localized in the nucleoplasm of tobacco cultured cells. Glycerol gradient fractionation of tobacco nuclear lysates showed the tRZ-1 is associated with a large ribonucleoprotein particle of 60 S in size. This suggests that RZ-1 may be involved in pre-mRNA processing. RGP-3 is localized as 10S particles in nucleoplasm. The biochemical basis of the RNA specificity and of ribonucleoprotein particles is an interesting issue, and further experiments are necessary to elucidate the function of RZ-1 and RGP-3.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] 花野 滋: "Isolation of a novel RNA-binding protein and its association with a large ribonucleoprotein particle present in the nucleoplasm of tobacco cells" Plant Molecular Biology. 31. 57-68 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 金子貫一: "Physical and gene maps of the unicellular cyanobacterium Synechococcus sp. strain PCC6301 genome." Plant Molecular Biology. 31. 193-201 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 花野 滋: "Structure and expression of the tobacco nuclear gene encoding RNA-binding protein RZ-1 : the existence of an intron in the 3′-untranslated region." DNA Research. 3. 65-71 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 藤城常雄: "Organization and transcription of a putative gene cluster encoding ribosomal protein S14 and an oligopeptide permease-like protein in the cyanobacterium Synechococcus PCC 6301." DNA Research. 3. 165-169 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 杉田 護: "Regulation of gene expression in chloroplasts of higher plants." Plant Molecular Biology. 32. 315-326 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 守口和基: "Structure and subcellular localization of a small RNA-binding protein from tobacco." Plant Journal. (印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hanano, Shigeru: "Isolation of a novel RNA-binding protein and its association with a large ribonucleoproteinparticle present in the nucleoplasm of tobacco cells." Plant Mol.Biol.31. 57-68 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kaneko, Takakazu: "Physical and gene maps of the unicellular cyanobacterium Synechococcus sp.strain PCC6301 genome." Plant Mol.Biol.31. 193-201 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hanono, Shigeru: "Structure and expression of the tobacco nuclear gene encoding RNA-binding protein RZ-1 : the existence of an intron in the 3'-untranslated region." DNA Res.3. 65-71 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Fujishiro, Tsuneo: "Organization and transcription of a putative gene cluster encoding ribosomal protein S14 and an oligopeptide permease-like protein in the cyanobacterium Synechococcus PCC 6301." DNA Res.3. 165-169 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Sugita, Mamoru: "Regulation of gene expression in chloroplasts of higher plants." Plant Mol.Biol.32. 315-326 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Morguchi, Kazuki: "Structure and subcellular localization of a small RNA-binding protein from tobacco." Plant Journal. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 花野滋: "Isolation of a novel RNA-binding protein and its association with a large ribonucleoprotein particle present in the nucleoplasm of tobacco cells." Plant Molecular Biology. 31. 57-68 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 金子貴一: "Physical and gene maps of the unicellular cyanobacterium Synechococcus sp.strain PCC6301 genome." Plant Molecular Biology. 31. 193-201 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 花野滋: "Structure and expression of the tobacco nuclear gene encoding RNA-binding protein RZ-1 : the existence of an intron in the 3′-untraslated region." DNA Research. 3. 65-71 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 藤城常雄: "Organization and transcription of a putative gene cluster encoding ribosomal protein S14 and an oligopeptide permease-like protein in the cyanobacterium Synechococcus PCC 6301." DNA Research. 3. 165-169 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 杉田護: "Regulation of gene expression in chloroplasts of higher plants." Plant Molecular Biology. 32. 315-326 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 守口和基: "Structure and subcellular localization of a small RNA-binding protein from tobacco." Plant Journal. (印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] 太田 賢: "Three types of nuclear genes encoding chloroplast RNA- binding proteins (cp29,cp31 and cp33) are present in Arabidopsis thaliana : Prsence of cp31 in chloropolasts and its homologue in nuclei/cytoplansms." Plant Molecular Bilogy. 27. 529-539 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 杉田 護: "Structure and expression of the gene encoding ribosomal protein S1 from the cyanobacterium Synechococcus sp.strain PCC 6301 : striking sequence similarity to the choloroplast ribosomal protein CS1." Molecular and General Genetics. 246. 142-147 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 杉田 護: "Genes encoding the group I intron-containing tRNAL eu and subunit L of NADH dehydrogenase from the cyanobacterium Synechococcus RCC 6301." DNA Research. 2. 71-76 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 青野光子: "Decrease in activity of glutathione reductase enhances paraquat sensitivity in transgenic Nicotiana tabacum." Plant Physiology. 107. 654-648 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 金子貴一: "Physical and gene maps of the unicellular cyanobacterium Synechococcus sp. strain PCC6301 genome." Plant Molecular Biology. (印刷中). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 花野滋: "Isolation of a novel RNA-binding protein and its associated with a large ribonucleoprotein particle present in the nucleoplasm of tobacco cells." Plant Molecular Biology. (印刷中). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 杉田 護: "Tracing Biological Evolution in protein and gene structures(Go,M.,Schimmel,P.,eds.)" Elsevier Science B.V., 314 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 杉田 護: "Post-transcriptional control of plant gene expression. (Filipowicz,B.,Hohn,T.,eds.)" Kluwer Academic Publishers(印刷中), (1996)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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