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Development of production process of useful compounds from cyanide.

Research Project

Project/Area Number 09556018
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section展開研究
Research Field 応用微生物学・応用生物化学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

OGAWA Jun (1998)  Kyoto Univ.Agr.Assistant Prof., 農学研究科, 助手 (70281102)

小林 達彦 (1997)  京都大学, 農学研究科, 講師 (70221976)

Co-Investigator(Kenkyū-buntansha) FURUYA Yuji  Ikeda Toka Industries, Researcher, 研究室, 次長(研究職)
EMDO Ryuichi  Nitto Chemical Industries, Researcher, 中央研究所, 首席主任研究員
SHIMIZU Sakoyu  Kyoto Univ.Agr.Prof., 農学研究科, 教授 (70093250)
KOBAYASHI Michihiko  Kyoto Univ.Agr.Senior Lecturer, 農学研究科, 講師 (70221976)
古谷 裕治  池田糖化工業(株), 研究室, 次長(研究職)
小川 順  京都大学, 農学研究科, 助手 (70281102)
Project Period (FY) 1997 – 1998
Project Status Completed (Fiscal Year 1998)
Budget Amount *help
¥8,700,000 (Direct Cost: ¥8,700,000)
Fiscal Year 1998: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1997: ¥6,200,000 (Direct Cost: ¥6,200,000)
KeywordsCyanide / C1 compound / nitrile hydratase / beta-cyanoalanine synthase / nitrilase / beta-oyanoalanine / Cl化合物 / Pseudomonas ovalis / PLP
Research Abstract

The final purpose of this project is the establishment of bioconversion process for the production of useful compounds from nitriles or that of nitriles from cyanide. Various types of microorganisms that metabolize cyanide were obtained from soil by an enrichment culture technique. They have been found to contain enzymes that synthesize nitriles from various amino acids and cyanide. beta-Cyanoalanine synthases were purified and characterized from Pseudomonas ovalis. The amino acid sequences of N-terminal and internal peptide fragments of the beta-cyanoalanine synthase from P.ovalis were determined in order to prepare synthetic oligonucleotides as primers of the polymerase chain reaction. A 700-bp DNA fragment thus amplified was used as the probe to clone a 3.0-kb BcII fragment coding for the partial beta-cyanoalanine synthase, and the 680-bp EcoRI-BcII from 3.0-kb BcII fragment was used as the probe to clone a 2.2-kb BssHII-EcoRI fragment coding for the whole beta-cyanoalanine synthase. The beta-cyanoalanine synthase gene modified in the sequence upstream of the presumed ATG start codon was expressed to about 40% of the total soluble protein in E, coli. The P.ovalis beta-cyanoalanine synthase and Rhodococcus rhodochrous K22 nitrilase were co-expressed in E.coli. The cell-free extracts were used for the production of aspartic acid from KCN.beta-cyanoalanine was produced from KCN and O-acetyl-serine immediately, and the resultant beta-cyanoalanine was transformed into aspartic acid. On the other hand, P.ovalis beta-cyanoalanine synthase and R.rhodochrous J1 nitrile hydratase were co-expressed in R.rhodochrous ATCC12674. The cell-free extracts were used in the production of asparagine. beta-Cyanoalanine was produced immediately, and the resultant beta-cyanoalanine was converted into asparagine.

Report

(3 results)
  • 1998 Annual Research Report   Final Research Report Summary
  • 1997 Annual Research Report
  • Research Products

    (26 results)

All Other

All Publications (26 results)

  • [Publications] Kobayashi et al.: "Identification of active sites in amidase : Evolutionary relationship between amide bond- and peptide bond-cleaving." Proc.Natl.Acad.Sci.USA. 94. 11986-11991 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Characterization and distribution of IS1164 that exists in the high molecula mass nitrile hydratase gene cluster of Rhodococcus." Proc.Jaapn Acad.73B. 104-108 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Komeda et al.: "A novel transporter involved in cobalt uptake." Proc.Natl.Acad.Sci.USA. 94. 36-41 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "The catalytic mechanism of amidase also involves nitrile hydrolysis." FEBS Lett.439. 325-328 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Nitrilase catalyzes amide hydrolysis as well as nitrile hydrolysis." Biochem.Biophys.Res.Commun.253. 662-666 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Metalloenzyme nitrile hydratase : Structure, regulation, and application to biotech." Nature Biotechnol.16. 733-736 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Shimizu et al.: "Advances in Biochemical Engineering/Biotechnology, 58" Springer-Verlag, Berlin, 239 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Identification of active sites in amidase : Evolutionary relationship between amide bond- and peptide bond-cleaving enzymes." Proc.Natl.Acad.Sci.USA. 94. 11986-11991 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Characterization and distribution of IS1164 that exists in the high molecular mass nitrile hydratase gene cluster of the industrial microbe Rhodococcus rhodochrous." Proc.Japan Acad.73B. 104-108 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Komeda et al.: "A novel transporter involved in cobalt uptake." Proc.Natl.Acad.Sci.USA. 94. 36-41 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "The catalytic mechanism of amidase also involves nitrile hydrolysis." FEBS Lett.439. 325-328 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Nitrilase catalyzes amide hydrolysis as well as nitrile hydrolysis." Biochem.Biophys.Res.Commun.253. 662-666 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi et al.: "Metalloenzyme nitrile hydratase : Structure, regulation, and application to biotechnology." Nature Biotechnol.16. 733-736 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Shimizu et al.: "Screening of novel microbial enzymes for the production of biologically and chemically useful compounds." Advances in Biochemical Engineering/Biotechnolgy. 58. 45-87 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1998 Final Research Report Summary
  • [Publications] Kobayashi,M. & Shimizu,S.: "Metalloenzyme nitrile hydratase : Structure,regulation,and application to biotechnology" Nature Biotechnol.16. 733-736 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi,M.et al.: "The catalytic mechanism of amidase also involves nitrile hydrolysis" FEBS Lett.439. 325-328 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi,M.et al.: "Nitrilase catalyzes amide hydrolysis as well as nitrile hydrolysis" Biochem.Biophys.Res.Commun.253. 662-666 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi,M.et al.: "Lactone-ring-cleaving enzyme : Genetic analysis,novel RNA editing,and evolutionary implications" Proc.Natl.Acad.Sci.USA. 95. 12787-12792 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] M.Kobayashi et al.: "Characterization and distribution of IS1164 that exists in the high molecular mass nitrile hydratase gene cluster." Proc.Japan Acad.73B(6). 104-108 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] M.Kobayashi et al.: "Identification of active sites in amidase : Evolutionary relationship between amide bon-and peptide bond-cleaving enzymes." Proc.Natl.Acad.Sci.USA. 94(22). 11986-11991 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] H.Komeda et al.: "A novel transporter in cobalt uptake." Proc.Natl.Acad.Sci.USA. 94(1). 36-41 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小林 達彦: "重金属コバルトによるスーパー酵素の誘導" バイオサイエンスとインダストリー. 55(3). 208-209 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小林 達彦: "ニトリル変換酵素の物質生産への機能開発" 農化誌. 71(12). 1243-1252 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 小林 達彦: "Rhodococcusのニトリルヒドラターゼとトランスポーター" 日本応用酵素協会誌. 32. 1-7 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] S.Shimizu et al.: "Advances in Biochemical Engineering/Biotechnology,vol.58" Springer-Verlag,Berlin, 42 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] 清水 昌: "高純度化技術大系.第3巻" フジ・テクノシステム,東京, 11 (1997)

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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