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Molecular Mechanisms Controlling Embryo and Meristem Formation

Research Project

Project/Area Number 10182101
Research Category

Grant-in-Aid for Scientific Research on Priority Areas (A)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

OKADA Kiyotaka  Kyoto Univ., Grad.Sch.Science, Professor, 大学院・理学研究科, 教授 (50101093)

Co-Investigator(Kenkyū-buntansha) FUKUDA Hiroo  Univ. Tokyo, Grad.Sch.Science, Professor, 大学院・理学系研究科, 教授 (10165293)
MATUOKA Makoto  Nagoya Univ., Bioscience Center, Professor, 生物分子応答研究センター, 教授 (00270992)
SUGIYAMA Munetaka  Univ. Tokyo, Grad.Sch.Science, Assoc. Professor, 大学院・理学系研究科, 講師 (50202130)
ARAKI Takashi  Kyoto Univ., Grad.Sch.Science, Assoc. Professor, 大学院・理学研究科, 助教授 (00273433)
SHINOZAKI Kazuo  Riken Institures, Lab. Plant Molec. Biol., Professor, 理化学研究所, 主任研究員 (20124216)
Project Period (FY) 1998 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥309,800,000 (Direct Cost: ¥309,800,000)
Fiscal Year 2001: ¥76,800,000 (Direct Cost: ¥76,800,000)
Fiscal Year 2000: ¥77,600,000 (Direct Cost: ¥77,600,000)
Fiscal Year 1999: ¥78,000,000 (Direct Cost: ¥78,000,000)
Fiscal Year 1998: ¥77,400,000 (Direct Cost: ¥77,400,000)
KeywordsEMBRYO GENESIS / MERISTEM / REGULATORY GENE / PLANT ORGANOGENESIS / ARABIDOPSIS / ORYZA / ZINNIA / MUTANT
Research Abstract

This project aimed to understand the genetic regulatory systems which contribute to make up multi-cellular body of plants, especially in the embryo development and in the meristem formation and maintenance. The major results are as follows.
1. Okada group : Analysis of a root meristem-defective mutant, hlr, showed that it has a mutation in a subunit of proteosome complex. This is a novel observation showing that programmed protein degradation is required for maintaining structure and function of the root meristem. This group also examined FTR gene controlling polarized cell elongation, CPC gene controlling epidermal cell specification, KOM gene controlling male gametophyte, and DAD1 gene controlling jasmonic acid synthesis and anther opening. 2. Araki group studied FAS1 and 2 genes responding to the formation of shoot apical meristem (SAM). The genes encode subunits of chromatin assembly factor (CAF). The group also analyzed a key flowering gene, FT, and identified new genes suppressing … More or enhancing the effect of overexpressing FT. 3. Kakimoto group identified isopentenyl transferases are the key enzyme in the cytokinin biosynthesis. The group also studied cytokinin receptors and their downstream signaling pathways. 4. Shinozaki group : The group constructed a large number of transposon-tagged Arabidopsis lines, and studied a set of mutants showing male sterile, embryo lethal, leaf malmorphology. 5. Sugiyama group studied a set of mutnats showing temperature-dependent defects in the shoot and root regeneration process from callus. They cloned one of the genes, SRD2, and shown the gene is related to the transcriptional activation of snRNAs. 6. Tasaka group examined gene regulatory network controlling SAM formation in embryogenesis. They studied CUC1 and 2 genes and shown they regulate other SAM genes such as STM and KNOX. 7. Fukuda group : By using synchronized cell culture system of Xinnia and the tip-procedure, a large number of genes were identified which are required for vascular cell formation from leaf cells. Genes required for cell autolysis were also cloned. 8. Matsuoka group studied a variety of rice embryo pattern mutants showing many shoots, no shoots, aberrant organ form, and abberant orientation of meristem. The studies above were reported in journals or at international or national symposiums. Less

Report

(6 results)
  • 2002 Final Research Report Summary
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (57 results)

All Other

All Publications (57 results)

  • [Publications] N.Matsumoto et al.: "A homeobox gene, PRESSED FLOWER, regulates lateral axis-dependent development of Arabidopsis flowers"Genes & Development. 15. 3355-3364 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Ishiguro et al.: "SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functiornal CLAVATA protein"EMBO Journal. 21. 898-903 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T.Sakamoto et al.: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes & Development. 15. 581-590 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S.Takada et al.I: "The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation"Development. 128. 1127-1135 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] R.Motohashi et al.: "An essential role of a TatC homologue of a pH-dependent protein transporter in thylakoid membrane formation during chloroplast develonment in Arabidopsis thaliana"Proc.Nat.Acad.Sci.USA. 98. 10499-10504 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K.Obara et al.: "Direct evidence of active and rapid nuclear degradation triggered by vacuole rupture during programmed cell death in Zinnia"Plant Physiol.. 125. 615-626 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 福田 裕穂 他: "朝倉植物生理学講座4 成長と分化"朝倉書店. 202 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Matsumoto et al.: "A homeobox gene, PRESSED FLOWER, regulates lateral axis-dependent development of Arabidopsis flowers"Genes & Development. 15. 3355-3364 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S. Ishiguro et al.: "SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functional CLAVATA protein"EMBO J.. 21. 898-903 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] T. Sakamoto et al.: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes & Development. 15. 581-590 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S. Takada et al.: "The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation"Development. 128. 1127-1135 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] R. Motohashi et al.: "An essential role of a TatC homologue of a pH-dependent protein transporter in thylakoid membrane formation during chloroplast development in Arabidopsis thaliana"Proc. Nat. Acad.Sci. USA. 98. 10499-10504 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] K. Obara et al.: "Direct evidence of active and rapid nuclear degradation triggered by vacuole rupture during programmed cell death in Zinnia"Plant Physiol.. 125. 615-626 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] H. Nagasaki, et al.: "Functional analysis of the conserved domains of a rice KNOZ homeodomain protein, OSH15"The Plant Cell. 13. 2085-2098 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] S. Ishiguro, et al.: "The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phopholipase A1catalyzing the initial, step of Jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis"The Plant Cell. 13. 2191-2209 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] N.Matsumoto et al.: "A homeobox gene,PRESSED FLOWER,regulates lateral axis-dependent development of Arabidopsis flowers"Genes & Development. 15. 3355-3364 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Ishiguro et al.: "SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functional CLAVATA protein"EMBO Journal. 21. 898-903 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T.Sakamoto et al.: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes & Development. 15. 581-590 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S.Takada et al.: "The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation"Development. 128. 1127-1135 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] R.Motohashi et al.: "An essential role of a TatC homologue of a pH-dependent protein transporter in thylakoid membrane formation during chloroplast development in Arabidopsis thaliana"Proc.Nat.Acad.Sci.USA. 98. 10499-10504 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K.Obara et al.: "Direct evidence of active and rapid nuclear degradation triggered by vacuole rupture during programmed cell death in Zinnia"Plant Physiol.. 125. 615-626 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] 福田 裕穂 他: "朝倉植物生理学講座4 成長と分化"朝倉書店. 202 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] N.Matsumoto et al.: "A homeobox gene, PRESSED FLOWER, regulates lateral axis-dependent development of Arabidopsis flowers"Genes & Development. 15. 3355-3364 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Ishiguro et al.: "SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functional CLAVATA protein"EMBO J. 21. 898-903 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] T. Sakamoto et al.: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes & Development. 15. 581-590 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Takada et al.: "The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation"Development. 128. 1127-1135 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] R. Motohashi et al.: "An essential role of a TatC homologue of a pH-dependent protein transporter in thylakoid membrane formation during chloroplast development in Arabidopsis thaliana"Proc. Nat. Acad.Sci. USA 98. 10499-10504 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] K. Obara et al.: "Direct evidence of active and rapid nuclear degradation triggered by vacuole rupture during programmed cell death in Zinnia"Plant Physiol.. 125. 615-626 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] H. Nagasaki, et al.: "Functional analysis of the conserved domains of a rice KNOZ homeodomain protein, OSH15"The Plant Cell. 13. 2085-2098 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] S. Ishiguro, et al.: "The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phopholipase A1 catalyzing the initial step of Jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis"The Plant Cell. 13. 2191-2209 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Matsumoto et al.: "A homeobox gene, PRESSED FLOWER, regulates lateral axis-dependent development of Arabidopsis flowers"Genes and Development. 15. 3355-3364 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ishiguro et al.: "The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis"Plant Cell. 13. 2191-2209 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Seki et al.: "Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses using a full-length cDNA microarray"Plant Cell. 13. 61-72 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Iwamoto et al.: "Elimination of POR expression correlates with red leaf formation in Amaranthus tricolor"Plant Journal. 27. 275-284 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] K.Obara et al.: "Direct evidence of active and rapid nuclear degradation triggered by vacuole rupture during programmed cell death in Zinnia"Plant Physiology. 125. 615-626 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Sakamoto et al.: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes and Development. 15. 581-590 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] 福田 裕穂 他: "朝倉植物生理学講座4 成長と分化"朝倉書店. 202 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] T.Kagawa: "Arabidopsis NPL1 : A phototropin homologue controlling the chloroplst high-light avoidance response "Science. 291. 2138-2141 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] H.Kaya: "FASCIATA genes for chromatin assembly factor-1 in Arabidopsis maintain the cellular organization of apical meristems"Cell. 104. 131-142 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Inoue: "Identification of CRE1 as a cytokinin receptor from Arabidopsis"Nature. 409. 1060-1063 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] K.Koizumi: "A series of novel mutants of Arabidopsis thaliana that are defective in the formation of continuous vascular network"Development. 127. 3197-3204 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S.Takada: "The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation"Development. 128. 1127-1135 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] T.Sakamoto: "KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem"Genes & Development. 15. 581-590 (2001)

    • Related Report
      2000 Annual Research Report
  • [Publications] 岡田清孝 他: "植物細胞工学シリーズ13植物の形を決める分子機構"秀潤社. 287 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 岡田清孝 他: "モデル植物ラボマニュアル"Springer-Verlag Tokyo. 275 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] S. Sawa: "FILAMENTOUS FLOWER controls formation and development of inflorescence and floral meristem of Arabidopsis thaliana"Plant Cell. 11. 69-86 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] S. Sawa: "Molecular Characterization of a meristem and organ identity gene of Arabidopsis, FILAMENTOUS FLOWER, encoding a zinc-finger and a HMG related domains"Gene & Development. 13. 1079-1088 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Y. Kobayashi: "A pair of related genes with antagonistic roles in mediating flowering signals"Science. 286. 1960-1962 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Kasuga, M.: "Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor"Nature Bio. Tech.. 17. 287-291 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tokuji, Y.: "A rapid method for transformation of carrot (Daucus carota L.) by using direct somatic embryogenesis"Biosci. Biothchnol. Biochem.. 63. 519-523 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Sato, Y.: "Loss-of function mutations in the rice homebox gene, OSHI5, affect the architecture of internodes resulting in dwarf plants"EMBO J.. 18. 992-1002 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shinozaki,K.: "Molecular responses to water stress in Arabidopsis thaliana." J.Plant Res.111. 720 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kakimoto,T.: "Genes involved in cytokinin signal transduction." J.Plant Res.111. 261-265 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] S.Sawa: "FILAMENTOUS FLOWER controls formation and development of inflorescence and floral meristem of Arabidopsis thaliana." Plant Cell. 11. 69-86 (1999)

    • Related Report
      1998 Annual Research Report
  • [Publications] Ozawa,S.: "Organogenic responses in tissue cultures of srd mutants of Arabidopsis thaliana." Development. 125. 135-142 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kusaba,S.: "Alteration of hormone levels in transgenic tobacco plants overexpressing the rice homeobox gene OSH1." Plant Phvsiol.116. 471-476 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Tanaka-Ueguchi,M.: "Over-expression of a tobacco homeobox gene, NTH15, decreases the expression of a gibberellin biosynthetic gene encoding GA20-oxidase." Plant J.15. 391-400 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2018-03-28  

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