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Studies of neighboring base damage induced by oxidation of synthetic DNAs containing oxidatively damaged bases

Research Project

Project/Area Number 10671979
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemical pharmacy
Research InstitutionOsaka City University (1999)
Hokkaido University (1998)

Principal Investigator

INOUE Hideo  Osaka City University, Faculty of Engineering, department of Bioapplied Chemistry, 工学部, 教授 (80088856)

Project Period (FY) 1998 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 1999: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1998: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsDNAs containing damaged bases / 8-oxoguanine / 8-oxoadenine / KMnOィイD24ィエD2 oxidation / neighboring base damage / reaction mechanism / KMnO_4酸化 / DNA損傷 / 酸化損傷塩基の酸化 / 過マンガン酸カリウム / 5-ヒドロキシウラシル / 5-ヒドロキシシトシン / 損傷塩基近傍の塩基損傷
Research Abstract

Recently we found that KMnOィイD24ィエD2 oxidation of DNA oligomers containing a 7,8-digydro-8-oxoguanine (8-oxo-G) residue induces damage to the neighboring base residues. The present data from several experiments suggested that a redox reaction involving the 8-oxo-G initiates damage: the reactivity of the DNA bases at the site 5'-adjacent to the 8-oxo-G was in the order G > A > T, C, and this preference correlates with the electron donating abilities of the bases. The present study also indicated that other oxidatively damaged bases, 7,8-dihydro-8-oxoadenine (8-oxo-A), 5-hydroxyuracil (5-oh-U) and 5-hydroxycytosine (5-oh-C) show similar behavior in DAN. On the other hand, in order to examine the pathways and the intermediates for the oxidative degradation of 8-oxo-G and 8-oxo-A, we have carried out the KMnOィイD24ィエD2 oxidation using 8-oxo-2'-deoxy-guanosine and -adenosine derivatives as a model. The reactions gave three major products, respectively, and we have determined the structures of the products. Based on the structures, we deduced active oxidation intermediates from the 8-oxo-purines (in DNA) which may be involved in the redox reaction as electron acceptors.

Report

(3 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • Research Products

    (11 results)

All Other

All Publications (11 results)

  • [Publications] Shiro Koizume: "Neighboring base damage induced by permanganate oxidation of 8-oxoguamine in DNA"Nucleic Acids Research. 26. 3599-3607 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Masayoshi Fukuoka: "Isolation and characterization of the products from KMnO4 osidation of an 8-oxo-2-deoxyguanosine derivative"Nucleic Acids Symposium series. 39(号). 233-234 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yuko Terashima: "Father studies of KMnO4 oxidation of syntheric DNAs containing oxidatively damaged bases"Nucleic Acids Symposium Series. 42(号). 35-36 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shiro Koizume, Hideo Inoue, Hiroyuki Kamiya and Eiko Ohtsuka: "Neighboring base damage induced by permanganate oxidation of 8-oxoguanine in DNA"Nucleic Acids Res.. 26・15. 3599-3607 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Masayoshi Fukuoka, Hideo Inoue, Takahiro Yamauchi, Shiro Koizume and Eiko Ohtsuka: "Isolation and characterization of the products from KMnOィイD24ィエD2 oxidation of an 8-oxo-2'-deoxyguanosine derivative"Nucleic Acids Symp.Ser.. No.39. 233-234 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yuko Terashima, Masayoshi Fukuoka, Eiko Ohtsuka and Hideo Inoue: "Further studies of KMnOィイD24ィエD2 oxidation of synthetic DNAs containing oxidatively damaged bases"Nucleic Acids Symp.Ser.. No.42. 35-36 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shiro Koizume: "Neighboring base damage induced by permanganate oxidation of 8-oxoguanine in DNA"Nucleic Acids Research. 26・5. 3599-3607 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Masayoshi Fukuoka: "Isolation and characterization of the products from KMnO_4 oxidation of an 8-oxo-2'-deoxyguanosine derivative"Nucleic Acids Symposium Series. 39. 233-234 (1998)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yuko Terashima: "Further studies of KMnO_4 oxidation of Syntheric DNAs containing oxidatively damaged bases"Nucleic Acids Symposium Series. 42. 35-36 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shiro Koizume et al.: "Neighboring base damage induced by permanganate oxidation of 8-oxoguanine in DNA" Nucleic Acids Research. 26・15. 3599-3607 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Masayoshi Fukuoka et al.: "Isolation and characterization of the products from KMnO4 oxidation of an 8-oxo-2'-deoxyguanosine derivative" Nucleic Acids Symposium Series. No.39. 233-234 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2025-11-20  

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