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Membrane protein degradation by E. coli FtsH

Research Project

Project/Area Number 11680697
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Cell biology
Research InstitutionKyoto University

Principal Investigator

AKIYAMA Yoshinori  Institute of Virus Research, Kyoto University, Associate Professor, ウイルス研究所, 助教授 (10192460)

Project Period (FY) 1999 – 2001
Project Status Completed (Fiscal Year 2001)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2001: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2000: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1999: ¥800,000 (Direct Cost: ¥800,000)
KeywordsE. coli / FtsH / ATPase / Protein degradation / membrane protein / AAA family / Protein degradation / プロテアーゼ / 膜ポテンシャル / 膜貫通配列
Research Abstract

E. coli FtsH is a membrane-bound and ATP-dependent protease. The N-terminal region of FtsH mediates membrane association as well as homo-oligomeric interaction of this enzyme. Previously we studied in vivo functionality of FtsH derivatives, in which the N-terminal membrane region was either deleted (FtsH(ΔTM)), replaced by a leucine-zipper (Zip-FtsH(ΔTM)), or replaced by a lactose permease transmembrane segment (LacY-FtsH)(1). It was indicated that homo-oligomerization is required for the minimum proteolytic activity, whereas a transmembrane sequence is required for membrane protein degradation. We purified and characterized these proteins in vitro. LacY-FtsH degraded both soluble and membrane proteins, but Zip-FtsH(ΔTM) only degraded soluble proteins. These proteins also exhibited significant ATPase activities. However, FtsH(ΔTM) remained inactive both in ATPase and protease activities, although it retained ATP-binding as well as denatured protein-binding abilities. These results indi … More cates that subunit association is important for the ATP hydrolytic activity of FtsH, and that the transmembrane sequence must exist to degrade a membrane protein even under detergent-solubilized conditions. We showed that this enzyme can also initiate proteolysis at a C-terminal cytosolic tail. This mode of degradation is also processive, which can be aborted by a tightly folded periplasmic domain. These results suggest that a same enzyme can exhibits either N to C or C to N processivity depending. Sequence alignment of FtsH indicates that glutamic acid residues are conserved at the positions corresponding to Glu 479 of E. coli FtsH. Mutations at this position compromised the proteolytic functions of FtsH in vivo. In vitro proteolytic activities of the mutant enzymes were low but significantly stimulated by high concentration of zinc ion. The mutations did not cause gross conformational changes in FtsH. The mutant proteins exhibited reduced zinc contents upon purification. From these results, we conclude that Glu 479 is a zinc-coordinating residue. Less

Report

(4 results)
  • 2001 Annual Research Report   Final Research Report Summary
  • 2000 Annual Research Report
  • 1999 Annual Research Report
  • Research Products

    (25 results)

All Other

All Publications (25 results)

  • [Publications] Koreaki Ito: "A class of integral membrane proteins will be overlooked by the "proteins" study that is based on two-dimensional gel electrophoreses"Molecular Microbiology. 31. 1600-1601 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Akio Kihara: "Dislocation of membrane proteins in FtsH-mediated proteolysis"The EMBO Journal. 18. 2970-2981 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Self-processing of FtsH and its implication for the cleavage specificity of this protease"Biochemistry. 38. 11693-11699 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shinobu Chiba: "Length recognition at the N-terminal tail of membrane proteins as a mode of initiation of FtsH-mediated proteolysis"EMBO Report. 1. 47-52 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Roles of multimerization and meribrane association in the proteorytic functions of FtsH"The EMBO Journal. 19. 3888-3895 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Tatsuta: "Evidence for an active role of the Dnak chaperone system in degradation of σ^<32>"FEBS Letters. 478. 271-275 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Akio Kihara: "Revisiting the lysogenization control of bacteriophage λ: Identification and characterization of a new host component"Journal of Biological Chemistry. 276. 13695-13700 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Roles of the home-oligomerization and membrane association in the ATPase and proteolytic activities of FtsH in vitro"Biochemistry. 40. 7687-7693 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kazue Kanehara: "Characterization of the yaeL gene products and its S2P-protease motifs in Escherchia coli"Gene. 281. 71-79 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Naoya Saikawa: "Identification of Glutamic acid 479 as the Gluzincin coordinator of zinc in FtsH (HfeB)"Biochemistry. 41. 1861-1868 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Ito, K.: "A class of integral membrane proteins will be overlooked by the "proteome" study that is based on two-dimensional gel electrophoresis"Mol. Microbiol.. 31. 1600-1601 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Akio Kihara: "Dislocation of membrane proteins in FtsH-mediated proteolysis"EMBO J.. 18. 2970-2981 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Self-processing of FtsH and its implication for the cleavage specificity of this protease"Biochemistry. 38. 11693-11699 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Shinobu Chiba: "Length recognition at the N-terminal tail of membrane proteins as a mode of initiation of FtsH-mediated proteolysis"EMBO. report 1. 47-52 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Roles of multimerization and membrane association in the proteolytic functions of FtsH (HflB)"EMBO J.. 19. 3888-3895 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Takashi Tatsuta: "Evidence for an active role of the DnaK chaperone system in the degradation of σ^<32>"FEBS Lett.. 478. 271-275 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Akio Kihara: "Revisiting the lysogenization control of bacteriophage λ: identification and characterization of a new host component, HflD"J. Biol Chem.. 276. 13695-13700 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Roles of the homo-oligomerization and membrane association in the ATPase and the proteolytic activities of FtsH in vitro"Biochemistry. 40. 7687-7693 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Kazue Kanehara: "Characterization the yaeL gene product and its S2P-protease motifs in Escherichia coli"Gene. 281. 71-79 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Naoya Saikawa: "Identification of Glutamic Acid 479 as the Gluzincin coordinator of zinc in FtsH (HflB)"Biochemistry. 41. 1861-1868 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2001 Final Research Report Summary
  • [Publications] Yoshinori Akiyama: "Roles of the homo-oligomerization and membrane association in the ATPase and the proteolytic activities of FtsH in vitro"Biochemistry. 40. 7687-7693 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Naoya Saikawa: "Identification of glutamic acid 479 as the gluzincin coordinator of zinc in FtsH (HflB)"Biochemistry. 41. 1861-1868 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kazue Kanehara: "Characterization of the yaeL gene product and its S2P-protease motifs in Escherichia coli"Gene. 281. 71-79 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Akiyama,Y.,and Ito,K.: "Roles of multimerization and membrame association in the proteolytic functions of FtsH"The EMBO Journal. 19. 3888-3895 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Akiyama,Y: "Self-processing of FtsH and its implication for the cleavage specificity of this protease"Biochemistry. 38. 11693-11699 (1999)

    • Related Report
      1999 Annual Research Report

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Published: 1999-04-01   Modified: 2016-04-21  

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