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Elucidation of Signal Transduction Mechanisms through Oxygen Sensor Protein FixL

Research Project

Project/Area Number 12680661
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionHosei University

Principal Investigator

IIZUKA Tetsutaro  Hosei University, Department of Materials Chemistry Faculty of Engineering, Professor, 工学部, 教授 (30029475)

Project Period (FY) 2000 – 2002
Project Status Completed (Fiscal Year 2002)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2002: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2001: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2000: ¥2,500,000 (Direct Cost: ¥2,500,000)
KeywordsOxygen sensor protein / FixL / FixJ / Hemoprotein / Nitrogen fixation enzyme / Active oxygen / Active hydrogen / Autoxidation / リン酸化 / 窒素固定遺伝子 / 自己リン酸化 / 分子内情報伝達 / 分子間情報伝達 / レギュレータータンパク質 / 高スピン / 低スピン
Research Abstract

The oxygen sensor protein FixL, which locates in the rhizobium in leguminous root nodules, senses the environmental oxygen tension and transmits the information to the nearby protein FixJ, which regulates the expression of the enzyme system for the nitrogen fixation. Therefore, the protein FixL is the key factor to connect the environment and DNA activation. Since FixL has a heme for oxygen sensing, it belongs to hemoprotein group together with hemoglobin and myoglobin.
In this project between 2000 and 2002, we elucidated (1)structure and function of heme-containing domain of FixL, (2)differences in structure and function between FixL and other hemoproteins, (3)mechanisms for intramolecular signal transmition between heme and kinase domain, (4)mode of interaction between FixL and FixJ, (S)activation mechanism of FixJ and its action on nitrogen fixation genes, by using various molecular spectroscopies, biochemical and molecular biological techniques. In the present stage, we have completed about 90 percent of this project. Remaining problem is the autoxidation phenomenon common to almost all hemoproteins including FixL. We studied the autoxidation mechanism, and proposed "active hydrogen theory" against the traditional "active oxygen theory". Now we have a controversy against one of the referees but it will fix in the near future.

Report

(4 results)
  • 2002 Annual Research Report   Final Research Report Summary
  • 2001 Annual Research Report
  • 2000 Annual Research Report
  • Research Products

    (19 results)

All Other

All Publications (19 results)

  • [Publications] Masahiro Mukai et al.: "Roles of Ile209 and Ile210 on the Heme Pocket Structure and Regulation of Histidine Kinase Activity of Oxygen Sensor FixL from Rhizobium meliloti"Biochemistry. 39. 13810-13816 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hideyuki Miyatake et al.: "Sensory Mechanism of Oxygen Sensor FixL from Phizobium Meliloti : Crystallographic, Mutagenesis and Resonance Raman Spectroscopic Studies"J.Mol.Biol.. 301. 415-431 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takashi Hayashi et al.: "Contribution of Heme-Propionic Side Chains to Structure and Function of Myoglobin : Chemical approach by Artificially Created Prosthetic Groups"J.Inorg.Chem.. 91. 94-100 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 飯塚哲太郎: "「吸収スペクトルからタンパク質の構造を探る」in「光が拓く生命科学」第8巻「夢の光-放射光が拓く生命科学の神秘」(安岡則武・木原裕 編)"共立出版. 171(57-70) (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshitsugu Shiro et al.: ""Physiological Functions and Molecular Structure of New Proteins" in "Molecular Anatomy of Cellular Systems" (I.Endo, I.Yamaguchi, T.Kudo, H.Osada, and T.Shibata, Eds.)"Elsevier. 231(189-204) (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 飯塚哲太郎: "「金属タンパク質の解析」in「新タンパク質科学実験法」第4巻(大島泰郎、鈴木紘一、藤井義明、村松喬 編)"東京化学同人(印刷中). (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Masahiro Mukai et al.: "Roles of Ile209 and Ile210 on the Heme Pocket Structure and Regulation of Histidine Kinase Activity of Oxygen Sensor FixL from Rhizobium meliloti"Biochemistry. 39. 13810-13816 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Hideyuki Miyatake et al.: "Sensory Mechanism of Oxygen Sensor FixL from Rhizobium meliloti: Crystallographic, Mutagenesis and Resonance Raman Spectroscopic Studies"J. Mol. Biol.. 301. 415-431 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Takashi Hayashi et al.: "Contribution of Heme-Propionic Side Chains to Structure and Function of Myoglobin: Chemical approach by Artificially Created Prosthetic Groups"J. Inorg. Chem.. 91. 94-100 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tetsutaro Iizuka: "How to Probe the Protein Structure with Absolution Spectroscopies in "Optics and Biosciences Vol.8 ; A Dream Light, Synchrotron Radiation, Opens the Mystery of Life", N. Yasuoka and Y. Kihara Eds., Book in Japanese"Kyouritu, Tokyo, Japan. 57-70 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Yoshitsugu Shiro et al.: "Physiological Functions and Molecular Structure of New Proteins in "Molecular Anatomy of Cellular Systems", I. Endo, I. Yamaguchi, T. Kudo, H. Osada, and T. Shibata, Eds."Elsevier, the Netherland. 189-204 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] Tetsutaro Iizuka: "Analysis of Metalloproteins in "New Experimental Methods in Protein Science Vol.4", T. Ooshima, K. Suzuki, Y. Hujii, and T. Muramatsu, Eds., Book in Japanese."Tokyo Kagaku Dokin, Tokyo, Japan (in press). (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2002 Final Research Report Summary
  • [Publications] 飯塚哲太郎: "「金属タンパク質の解析」in「新蛋白質科学実験法」(大島泰郎、鈴木紘一、藤井義明、村松喬 編)"東京化学同人(印刷中). (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 飯塚哲太郎: "「生物物理へのインパクト-加速器の進歩から生まれた構造生物学」in「現代物理学の歴史と展望」(荒船次郎、江沢洋、中村孔一、米沢富美子 編)"朝倉書店(印刷中). (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shiro, Y., Iizuka, T.ほか: ""Physiological Functions and Molecular Structure of New Proteins" in "Molecular Anatomy of Cellular Systems" (I. Endo, I. Yamaguchi, T. Kudo, H. Osada, and T. Shibata, Eds.)"Elsevier(印刷中). (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Saito, K. ほか: "Characterization of Functional Residues for transcriptional Activation of FixJ in Rhizobial Oxygen Sensing System"J. Biol. Chem.. (In press). (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Masahiro Mukai: "Roles of Ile209 and Ile210 on the Heme Pocket Structure and Regulation of Histidine Kinase Activity of Oxygen Sensor FixL from Rhizobium meliloti."Biochemistry. 39・45. 13810-13816 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Hideyuki Miyatake: "Sensory Mechanism of Oxygen Sensor FixL from Rhizobium meliloti : Crystallographic, Mutagenesis and Resonance Raman Spectroscopic Studies."J.Mol.Biol.. 301・. 415-431 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 飯塚哲太郎: "「吸収スペクトルからタンパク質の構造を探る」 in 「光が拓く生命科学」第8巻「夢の光-放射光が拓く生命科学の神秘」(安岡則武,木原裕 編)"共立出版. 171(57-70) (2000)

    • Related Report
      2000 Annual Research Report

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Published: 2000-04-01   Modified: 2016-04-21  

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