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Study on structure and function of force-generating proteins in ion-driven flagellar motor

Research Project

Project/Area Number 13308038
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

HOMMA Michio  Nagoya University, Graduate School of Science, professor, 大学院・理学研究科, 教授 (50209342)

Co-Investigator(Kenkyū-buntansha) KAWAGISHI Ikuro  Nagoya University, Graduate School of Science, assistant professor, 大学院・理学研究科, 助教授 (80234037)
YAKUSHI Toshiharu  Nagoya University, Graduate School of Science, assistant professor, 大学院・理学研究科, 助手 (30324388)
Project Period (FY) 2001 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥52,650,000 (Direct Cost: ¥40,500,000、Indirect Cost: ¥12,150,000)
Fiscal Year 2004: ¥8,970,000 (Direct Cost: ¥6,900,000、Indirect Cost: ¥2,070,000)
Fiscal Year 2003: ¥8,710,000 (Direct Cost: ¥6,700,000、Indirect Cost: ¥2,010,000)
Fiscal Year 2002: ¥12,350,000 (Direct Cost: ¥9,500,000、Indirect Cost: ¥2,850,000)
Fiscal Year 2001: ¥22,620,000 (Direct Cost: ¥17,400,000、Indirect Cost: ¥5,220,000)
Keywordsion channel / energy transduction / Vibrio / flagella / motor / Sodium motive force / 細菌べん毛 / 運動 / 静電相互作用
Research Abstract

The bacterial flagellar motor is the molecule machine which changes ionic inflow into the rotational power, and it is divided into the Na^+-and H^+-driven type by the coupling ions. Four components of PomA, PomB, MotX and MotY are necessary for the polar flagella driven by Na^+ in the oceano bacteria, Vibrio alginolyticus. We made chimera proteins between the H^+-driven type MotAB of E.coli and the Na^+-driven type PomAB of Vibrio alginolyticus, and die functions of these chimera proteins were analyzed. MotXY are not necessary for the function of the chimera motor that consists of the extracelluler region of the H^+-driven type MotB protein and the transmembrane region of the Na^+-driven type PomB protein. This chimera motor is functional even in E.coli cells as Na^+-driven type. Furthermore, we could isolate the temperature sensitivity mutant whose mutation site is determined in the motor proteins. This kind of mutant had not been isolated. From the analysis about this temperature sen … More sitivity, it was clarified that the neighborhood area of the transmembrane regions (TM2 and TM3) connected to the cytoplasmic region of PomA is important for the motor function. Using the PomA and PomB proteins fused to GFP, we investigated the assemble process of the stator proteins which is essential for the energy transduction. We could observe the fluorescent dots at the cell poles accompanied with the flagellar structure. The stator proteins formed a complex in the inner membrane. From the results using this GFP experimental system, we could propose the model that the motor proteins are incorporated as the complex into the flagellar motor. Finally, we found the motor protein, MotY, was localized in the periplasmic space without MotX and its overexpression system was constructed. The large amount of MotY could be prepared to examine the conditions for the crystal formation of MotY. As the result, we could have the crystals with hexagonal pillar, and get the diffraction pattern with the 2.7Å resolution. We are going to determine its phase and to make the molecular modeling of the MotY structure. Less

Report

(5 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (20 results)

All 2005 2004 Other

All Journal Article (8 results) Book (3 results) Publications (9 results)

  • [Journal Article] Deletion analysis of the carboxyl terminal region of the PomB component of the Vibrio alginolyticus polar flagellar motor. alginolyticus polar flagellar motor.2005

    • Author(s)
      Yakushi, T., Hattori, N., Homma, M.
    • Journal Title

      J.Bacteriol. 187(2)

      Pages: 778-784

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Deletion analysis of the carboxyl terminal region of the PomB component of the Vibrio alginolyticus polar flagellar motor, alginolyticus polar flagellar motor.2005

    • Author(s)
      Yakushi, T., Hattori, N., Homma, M.
    • Journal Title

      J.Bacteriol. 187(2)

      Pages: 778-784

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] イオン駆動型べん毛の回転機構:回転力はどこで発生しているのだろう?2005

    • Author(s)
      福岡創, 薬師寿治, 本間道夫
    • Journal Title

      生物物理 45(1)

      Pages: 22-27

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Concerted effects of amino acid substitutions in conserved charged residues and other residues in the cytoplasmic domain of PomA, a stator component of Na^+-driven flagella.2004

    • Author(s)
      Fukuoka, H., Yakushi, T., Homma, M.
    • Journal Title

      J.Bacteriol. 186(20)

      Pages: 6749-6758

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Isolation of Vibrio alginolyticus sodium-driven flagellar motor complex composed of PomA and PomB solubilized by sucrose monocaprate.2004

    • Author(s)
      Yakushi, T., Kojima, M., Homma, M.
    • Journal Title

      Microbiology 150

      Pages: 911-920

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Multimeric structure of the PomA/PomB channel complex in the Na^+-driven flagellar motor of Vibrio alginolyticus.2004

    • Author(s)
      Yorimitsu, T., Kojima, M., Yakukshi, T., Homma, M.
    • Journal Title

      J.Biochem.(Tokyo) 135(1)

      Pages: 43-51

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Interaction of PomB with the third transmembrane segment of PomA in the Na^+-driven polar flagellum of Vibrio alginolyticus.2004

    • Author(s)
      Yakushi, T., Maki, S., Homma, M.
    • Journal Title

      J.Bacteriol. 186(16)

      Pages: 5281-5291

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Multimeric structure of the PomA/PomB channel complex in the Na^+-driven flagellar motor of Vibrio alginolyticus.2004

    • Author(s)
      Yorimitsu, T., Kojima, M., Yakukshi, T.
    • Journal Title

      J.Biochem.(Tokyo) 135(1)

      Pages: 43-51

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Bacterial Flagellar Motor in Reflexive Polymers and Hydrogels(Yui N., Mrsny RJ., and Park K., edit.)2004

    • Author(s)
      Homma, M., Yakushi, T.
    • Publisher
      CRC Press LLC, Washington, D.C.
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Bacterial Flagellar Motor in Reflexive Polymers and Hydrogels(Yui N., Mrsny RJ., and Park K., edit)2004

    • Author(s)
      Homma, M., Yakushi, T.
    • Publisher
      CRC Press LLC, Washington, D.C.
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Bacterial Flagellar Motor in Reflexive Polymers and Hydrogels(Yui N., Mrsny R.J., Park K., edit.)2004

    • Author(s)
      Homma, M., Yakushi, T.
    • Publisher
      CRC Press LLC, Washington, D.C.
    • Related Report
      2004 Annual Research Report
  • [Publications] Yakushi, T., Kojima, M., Homma, M.: "Isolation of Vibrio alginolyticus sodium-driven flagellar motor complex composed of PomA and PomB solubilized by sucrose monocaprate"Microbiology. 150. 911-920 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yorimitsu, T., Kojima, M., Yakukshi, T., Homma, M.: "Multimeric structure of the PomA/PomB channel complex in the Na^+-driven flagellar motor of Vibrio alginolyticus"J.Biochem.(Tokyo). 135. 43-51 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yorimitsu, T., Mimaki, A., Yakushi, T., Homma, M.: "The conserved charged residues of the C-terminal region of FliG, a rotor component of Na^+-driven flagellar motor"J.Mol.Biol.. 334. 567-583 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sowa, Y., Hotta, H., Homma, M., Ishijima, A.: "Torque-speed relationship of the Na^+-driven flagellar motor of Vibrio alginolyticus"J.Mol.Biol.. 327. 1043-1051 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Asai, Y. et al.: "Ion-coupling determinants of Na^+-driven and H^+-driven flagellar motors"J.Mol.Biol.. 327. 453-463 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shiomi, D. et al.: "Dual recognition of the bacterial chemoreceptor by chemotaxis-specific cbmains of the CheR methyltransferase"J.Biol.Chem. 277. 42325-42333 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yorimitsu, T. et al.: "The systematic substitutions around the conserved charged residues of the cytoplasmic loop of Na^+-driven flagellar motor component PomA"J.Mol.Biol.. 320. 403-413 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Umemura, T., Matsumoto, Y., Ohnishi, K., Homma, M., Kawagishi, I.: "Sensing of cytoplasmic pH by bacterial chemoreceptors involves the linker region that connects the membrane-spanning and the signal-modulating"J Biol Chem.. 277(2). 1593-1598 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yorimitsu, T., M.Homma.: "Na^+-driven flagellar motor of Vibrio"Biochem.Biophys.Acta-Bioenergetics.. 1505. 82-93 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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