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Establishment of A New Group of Glycosyl Hydrolase Family 1 Specific to Disaccharide Glycosides in Plant Kingdom

Research Project

Project/Area Number 13460049
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionKyoto University

Principal Investigator

SAKATA Kanzo  Kyoto University, Institute for Chemical Research, Professor, 化学研究所, 教授 (20087563)

Co-Investigator(Kenkyū-buntansha) HIRATAKE Jun  Kyoto University, Institute for Chemical Research, Associate Professor, 化学研究所, 助教授 (80199075)
MIZUTANI Masaharu  Kyoto University, Institute for Chemical Research, Instructor, 化学研究所, 助手 (60303898)
SHIMIZU Bunichi  Kyoto University, Institute for Chemical Research, Instructor, 化学研究所, 助手 (50324695)
KATO Hiroaki  Harima Institute, RIKEN, Membrane Dynamic Research Group, Cheam Leader, 速度論的結晶学研究チーム, チームリーダー (90204487)
SAKATA Kanzo  Kyoto University, Institute for Chemical Research, Professor (20087563)
Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥18,600,000 (Direct Cost: ¥18,600,000)
Fiscal Year 2003: ¥4,000,000 (Direct Cost: ¥4,000,000)
Fiscal Year 2002: ¥4,600,000 (Direct Cost: ¥4,600,000)
Fiscal Year 2001: ¥10,000,000 (Direct Cost: ¥10,000,000)
Keywordsβ-primeverosidase / diglycosidase / disaccharide glycoside specific hydrolase / glycosyl hydrolase family 1 / furcatin hydrolase / vicianin hydrolase / glycosylamidine / affinity adsorbent / カラスノエンドウ / グリコシダーゼファミリー / フルカチン / ムシカリノキ / 生体防御 / 二糖配糖体 / 二糖配糖体加水分解酵素 / コンビナトリアル / 基質特異性
Research Abstract

The following research results have been obtained by this research project.
(A)Clarification of catalytic mechanisms of the diglycosidases and their stereostructures
1)Substrate specificities of diglycosidases such as tea leaf β-primeverosidase (PRD), furcatin hydrolase (FH) in Viburnum furcatum, Vicianin hydrolase (VH) in Vicia angustifolia var. segetalis have been studied with various kinds of synthetic and natural substrates to show that these diglycosdiases are very specific to disaccharide glycosides with β-1,6 linkage.
2)The full-length cDNA of PRD and VH were overexpressed in insect cells and that of. FH in E.coli. The recombinant PRD was obtained at ca. 30 mg/liter of the medium. This allowed us to try crystallization of the protein for X-ray crystallographic analysis.
3)We have developed a new type of glycosidase inhibitors, glycosylamidines, with potent and selective activities. An affinity adsorbent with a ligand of β-primeverosyl has been prepared and was found to be quite effective for purification of PRD as well as the other diglycosidases.
(B)Establishment of a new family of diglycosidases in plant kingdom and clarification of their physiological roles
The anti-PRD antibody prepared with the recombinant PRD was found to be highly selective and sensitive. Application of this- antibody allowed us to know the expression of the PRD gene at higher level in the younger tea leaves and the localization of the PRD in cell membrane or intercellular space.
Distribution of diglycosidases was surveyed by using. β-primeverosidase activity, detection of disaccharide formation with TLC and immunoblotting analysis with the anti-PRD antibody among several kinds of plants most of which are known to contain some disaccharide glycosides. The results strongly suggest wide range of distribution of diglycosidases in plant kingdom.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (29 results)

All 2004 2003 Other

All Journal Article (13 results) Book (1 results) Publications (15 results)

  • [Journal Article] Furcatin hydrolase from Viburnum furcatum Blume is a novel disaccharide-specific acuminosidase in glycosyl hydrolase family 12004

    • Author(s)
      Ahn, Y-O., Mizutani, M., Saino, H., Sakata, K.
    • Journal Title

      J.Biol.Chem. 279(22)

      Pages: 23405-23414

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Glycosylamidines as potent selective and easily accessible glycosidase inhibitors and their application to affinity chromatography2003

    • Author(s)
      Hiratake, J., Sakata, K.
    • Journal Title

      Methods in Enzymology 363

      Pages: 421-444

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Diglycoside-specific glycosidases : Recognition of carbohydrates in biological systems2003

    • Author(s)
      Sakata, K., Mizutani, M., et al.
    • Journal Title

      Methods in Enzymology 363

      Pages: 444-459

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] β-Glycosylamidine as a ligand for affinity chromatography tailored to the glycon substrate specificity of β-glycosidase2003

    • Author(s)
      Inoue, K., Hiratake, J., et al.
    • Journal Title

      Carbohydrate Research 338

      Pages: 1477-1490

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 茶の香気生成機構の研究から植物グリコシダーゼ研究の新展開へ2003

    • Author(s)
      坂田 完三
    • Journal Title

      日本食品新素材研究会誌 5・2

      Pages: 9-17

    • NAID

      40005667069

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] 茶の香気生成とβ-プリメベロシダーゼ2003

    • Author(s)
      坂田完三, 水谷正治
    • Journal Title

      Foods & Food Ingredients Journal of Japan 208・12

      Pages: 991-1033

    • NAID

      80016355636

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Furcation hydrolase from Viburnum furcatum Blume is a novel disaccharide-specific acuminosidase in family 1 of the glycosyl hydrolases2003

    • Author(s)
      Ahn, Y-O, Mizutani, M, Sakata, K.
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 23405-23414

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Glycosylamidines as potent selective and easily accessible glycosidase inhibitors and their application to affinity chromatography : Recognition of carbohydrates in biological systems2003

    • Author(s)
      Hiratake J., Sakata K.
    • Journal Title

      Methods in Enzymology 363

      Pages: 421-444

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Diglycoside-specific glycosidases : Recognition of carbohydrates in biological systems2003

    • Author(s)
      Sakata, K., Mizutani, M., Ma, S-J., Hiratake, J.
    • Journal Title

      Methods in Enzymology 363

      Pages: 444-459

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] β-Glycosylamidine as a ligand for affinity chromatography tailored to the glycon substrate specificity of β-glycosidases2003

    • Author(s)
      Inoue.K., Hiratake, J., Mizutani, M., Takada, M., Yamamoto, M., Sakata, K.
    • Journal Title

      Carbohydrate Research 338

      Pages: 1477-1490

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] New Research Developments of Plant Glycosidases from Studies on Molecular Basis of Aroma Formation During Tea Manufacturing (in Japanese)2003

    • Author(s)
      Sakata, K.
    • Journal Title

      J.Advd.Foodingred 5(2)

      Pages: 9-17

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] β-Primeverosidase and Its Contribution to Formation of Floral Tea Aroma During Oolong and Black Tea Manufacturing (in Japanese)2003

    • Author(s)
      Sakata, K., Mizutani, M.
    • Journal Title

      Foods & Food Ingredients J.Jpn 208, No.12

      Pages: 991-1003

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Plant Volatiles (in Japanese)2003

    • Author(s)
      Watanabe, N., Sakata, K.
    • Journal Title

      Dictionary of Agricultural Chemistry (Ed.by Suzuki, A., Arai.S.)(Asakura Shoten)(Tokyo)

      Pages: 650-653

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Book] 農芸化学の事典(鈴木昭憲・荒井綜一編)分担執筆:植物の香り2003

    • Author(s)
      渡辺修治, 坂田完三
    • Publisher
      朝倉書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hiratake, J., Sakata, K.: "Glycosylamidines as potent selective and easily accessible glycosidase inhibitors and their application to affinity chromatography"Methods in Enzymology. 363. 421-444 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sakata, K., Mizutani, M., et al.: "Diglycoside-specific glycosidases : Recognition of carbohydrates in biological systems"Methods in Enzymology. 363. 444-459 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sakata, K., Mizutani, M., et al.: "β-Glycosylamidine as a ligand for affinity chromatography tailored to the glyconsubstrate specificity of β-glycosidase"Carbohydrate Research. 338. 1477-1490 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 坂田完三: "茶の香気生成機構の研究から植物グリコシダーゼ研究の新展開へ"日本食品新素材研究会誌. 5・2. 9-17 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 坂田完三, 水谷正治: "茶の香気生成とβ-プリメベロシダーゼ"Foods & Food Ingredients Journals of Japan. 208・12. 991-1033 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ahn, Y-O, Mizutani, M, Sakata, K.: "Furcatin hydrolase from Viburnum furcatum Blume is a novel disaccharide-specific acuminosidase in family 1 of the glycosyl hydrolases"Journal of Biological Chemistry. 279(in press). (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 渡辺修治, 坂田完三: "農芸化学の事典 分担執筆:植物の香り"鈴木昭憲・荒井綜一編:朝倉書店. 650-653 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Mizutani, M., et al.: "Cloning of 15-primeverosidase, a key enzyme in tea aroma formation from Camellia sinensis var. sinensis cv. Yabukita"Plant Physiology. 130. 2164-2176 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 平竹潤, 坂田完三: "選択的β-グリコシダーゼ阻害剤の分子設計とその応用…テーラーメードにグリコシダーゼを狙い撃ちできるか?"化学と生物. 40・6. 352-354 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 坂田完三: "茶の香気生成機構の研究から植物グリコシダーゼ研究の新展開へ"日本食品新素材研究会誌. 5・2. 9-17 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakata, K., Mizutani, M., et al.: "Diglycoside-specific, glycosidases : Recognition of Carbohydrates in Biological Systems"Methods in Enzymology. 363(in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hiratake, J., Sakata, K.: "Glycosylamidines as potent selective and easily accessible glycosidase inhibitors and their application to affinity chromatography"Methods in Enzymology. 363(in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ma, S.-J., Mizutani, M., et al.: "Substrate specificity of b-primeverosidase, a key enzyme in aroma formation during oolong tea and black tea manufacturing"Biosci. Biotechnol. Bichem.. 65・12. 2719-2729 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Mizutani, M., Nakanishi, H., et al.: "β-Primeverosidase: A unique diglycosidase concerned with the floral aroma formation during tea manufacturing"Proceedings of 2001 International Conference on O-CHA (Tea) Culture and Science. Session II. 15-20 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Ma, S-J., Mizutani, et al.: "Substrate specificity of b-Primeverosidase, a key enzyme in aroma formation during oolong tea and black tea manufacturing"Proceedings of 2001 International Conference on O-CHA (Tea) Culture and Science. Session II. 120-124 (2001)

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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