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Analysis of structure-function correlation of oryzacystatin and development of new functional foods

Research Project

Project/Area Number 13460054
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 食品科学・栄養科学
Research InstitutionThe University of Tokyo

Principal Investigator

TANOKURA Masaru  The University of Tokyo, Graduate School of Agricultural and Life Sciences, Professor, 大学院・農学生命科学研究科, 教授 (60136786)

Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥5,900,000 (Direct Cost: ¥5,900,000)
Fiscal Year 2003: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2002: ¥3,300,000 (Direct Cost: ¥3,300,000)
Keywordscystatin / protease inhibitor / dimer-monomer conversion / structure-function correlation / nuclear magnetic resonance (NMR) / X-ray crystallography / new functional food / オリザシスタチン / システインプロテアーゼ / プロテアーゼ阻害剤 / モネリン / 甘味タンパク質 / キメラタンパク質 / 結晶化 / 二量体化 / 発光細菌 / 発光反応 / 発光関連酵素 / フラビン還元酵素
Research Abstract

Oryzacystatin (OC) contained within rice (Oryza sativa) is the protein, which inhibits cysteine protease (CP) specifically. It inhibits papain stoichiometrically and has a great thermostability, its activity still remain even if under the conditions of cooking rice, and also is stable with acid and alkali. It regulates the metabolism of seed by controlling the activity of CP, which is concerned with protein degradation in seed. OC also recognizes the CP that exists in foreigners or sources of infection like insect, bacteria and virus as an extrinsic target enzyme and inhibits their activity, so it is said to play an important role in biological defense.
This study is focused on function-structure correlation analysis of OC using biochemical method and three-dimensional structural analysis. We succeeded in conversion between dimer and monomer of OC freely by controlling the temperature and pH of solution or concentration of protein or by addition of denaturing agent. We revealed that dimer has less inhibitory activity than monomer. This result suggests that OC acts as a regulator, which regulates protease activity by its conformational change depending on various environmental changes in the stages of development of rice. Solution NMR structure of OC revealed the conformational change occurred with the regions of the first loop and the second loop, which are important for inhibition activity, when it is dimerized. This change would be the cause of the decrease of inhibition activity. In addition, we succeeded in crystallization with homodimer of OC and diffraction data was collected to 2.9 A.
OC is applicable to drug medicine and functional food. It became clear that the activity of OC could be regulated by change the solution condition in this study, so we can use this mechanism for construction of nanomachine controlled by pH, and have resistance to acid and heat.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] Kato, Y., Ito, M., Kawai, K., Nagata, K., Tanokura, M.: "Determinants of ligand specificity in groups I and IV WW domains as studied by surface plasmon resonance and model building."J.Biol.Chem.. 277. 10173-10177 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sawano, Y., Muramatsu, T., Hatano, K., Nagata, K., Tanokura, M.: "Characterization of genomic sequence coding for bromelain inhibitors in pineapple and expression of its recombinant isoform."J.Biol.Chem.. 277. 28222-28227 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Iwasaki, W., Sasaki, H., Nakamura, A., Kohama' K., Tanokura, M.: "Metal-free and Ca^<2+>-bound structures of a multidomain EF-hand protein, CBP40, from the lower eukaryote, Physarum polycephalum."Structure. 11. 75-85 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katayama, H., Nagata, K., Ohira, T., Yumoto, F., Tanokura, M., Nagasawa, H.: "The solution structure of molt-inhibiting hormone from the kuruma prawn Marsupenaeus japonicus."J.Biol.Chem.. 278. 9620-9623 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato, Y., Nagata, K., Takahashi, M., Lian, L., Herrero J., Sudol, M., Tanokura, M.: "Common mechanism of ligand recognition by Group-II/III WW domains-redefining their functional classification."J.Biol.Chem. (in press). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 田之倉優, 伊東孝祐: "ナノバイオテクノロジーの最前線(植田充美 監修)、X線結晶構造解析からみるナノバイオテクノロジー"シーエムシー出版. 11 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato, Y., Ito, M., Kawai, K., Nagata, K, Tanokura, M.: "Determinants of ligand specificity in groups I and IV WW domains as studied by surface plasmon resonance and model building."J.Biol.Chem.. 277. 10173-10177 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sawano, Y., Muramatsu, T., Hatano, K., Nagata, K., Tanokura, M.: "Characterization of genomic sequence coding for bromelain inhibitors in pineapple and expression of its recombinant isoform."J.Biol.Chem.. 11. 28222-28227 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Iwasaki, W., Sasaki, H., Nakamura, A., Kohama, K., Tanokura, M.: "Metal-free and Ca^<2+>-bound structures of a multidomain EF-hand protein, CBP40, from the lower eukaryote, Physarum polycephalum."Structure. 11. 75-85 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Katayama, H., Nagata, K., Ohira, T., Yumoto, F., Tanokura, M., Nagasawa, H.: "The solution structure of molt-inhibiting hormone from the kuruma prawn Mars upenaeus japonicus."J.Biol.Chem.. 278. 9620-9623 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Kato, Y., Nagata, K., Takahashi, M., Lian, L., H t, J., Sudol, M., Tanokura, M.: "Common mechanism of ligand recognition by Group-II/III WW domains-redefining their functional classification."J.Biol.Chem.. (in press). (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Tanokura, M., Itoh, K.: "Frontiers of nanobiotechnology (Veda, M., ed.) Nanobiotechnology from the viewpoint of X-ray crystallography.(In Japanese)"CMC publishing Co., Ltd.. 10 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Iwasaki, W., Sasaki, H., Nakamura, A., Kohama, K., Tanokura, M.: "Metal-free and Ca^<2+>-bound structures of a multidomain EF-hand protein, CBP40, from the lower eukaryote, Physarum polycephalum."Structure. 11. 75-85 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hatano, K., Kojima, M., Tanokura, M., Takahashi, K.: "Nuclear magnetic resonance studies on the pK_a values and interactions of ionizable groups in bromelain inhibitor VI from pineapple stem."Biol.Chem.. 384. 93-104 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ito, M., Kato, Y., Nagata, K., Oda, Y., Yamagoe, S., Suzuki, K., Tanokura, M.: "Expression, oxidative refolding and characterization of six-histidine-tagged recombinant human LECT2, a 16-kDa chemotactic protein with three disulfide bonds."Protein Express.Purif.. 27. 272-278 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Katayama, H., Nagata, K., Ohira, T., Yumoto, F., Tanokura, M., Nagasawa, H.: "The solution structure of molt-inhibiting hormone from the kuruma prawn Marsupenaeus japonicus."J.Biol.Chem.. 278. 9620-9623 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Suzuki, R., Nagata, K., Yumoto, F., Kawakami, M., Nemoto, N., Furutani, M., Adachi, K., Maruyama, T., Tanokura, M.: "Three-dimensional solution structure of an archaeal FKBP with a dual function of peptidyl prolyl cis-trans isomerase and chaperone-like activities."J.Mol.Biol.. 328. 1149-1160 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kamagata, K., Sawano, Y., Tanokura, M., Kuwajima, K.: "Multiple parallel-pathway folding of proline-free Staphylococcal nuclease."J.Mol.Biol.. 332. 1143-1153 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 田之倉優, 伊東孝祐: "ナノバイオテクノロジーの最前線(植田充美監修)、X線結晶構造解析からみるナノバイオテクノロジー"シーエムシー出版. 11 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kato, Y., Ito, M., Kawai, K., Nagata, K., Tanokura, M.: "Determinants of ligand specificity in groups I and IV WW domains as studied by surface plasmon resonance and model building"Journal of Biological Chemistry. 277・12. 10173-10177 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sawano, Y., Muramatsu, T., Hatano, K., Nagata, K., Tanokura, M.: "Characterization of genomic sequence coding for bromelain inhibitors in pineapple and expression of its recombinant isoform"Journal of Biological Chemistry. 277・31. 28222-28227 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Iwasaki, W., Sasaki, H., Nakamura, A., Kohama, K., Tanokura, M.: "Metal-free and Ca^<2+>-bound structures of a multidomain EF-hand protein, CBP40, from the lower eukaryote, Physarum polycephalum"Structure. 11・1. 75-85 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hatano, K., Kojima, M., Tanokura, M., Takahashi, K.: "Nuclear magnetic resonance studies on the pK_a values and interactions of ionizable groups in bromelain inhibitor VI from pineapple stem"Biological Chemistry. 384・1. 93-104 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Maeda, M., Takeuchi, K., Kojima, M., Tanokura, M., Kimura, K., Amemiya, Y., Kihara, H., Takahashi, K.: "Kinetic studies of unfolding process of aspergillopepsinn II by pH-jump methods"Biochemical and Biophysical Research communications. 301・3. 745-750 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Katayama, H., Nagata, K., Ohira, T., Yumoto, F., Tanokura, M., Nagasawa, H.: "The solution structure of molt-inhibiting hormone from the kuruma prawn Marsupenaeus japonicus"Journal of Biological Chemistry. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 田之倉優, 阿久津秀雄, 村松知成: "生化学キーノート(Hammes, B.D., Hooper, N.M. 著)"シュプリンガーフェアラーク東京. 464 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 田之倉優, 村松知成, 八木澤 仁: "分子生物学キーノート (Turner, P.C., McLennan, A.G., Bates, A.D., White, M.R.H. 著)"シュプリンガーフェアラーク東京. 398 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sakai, N., Yao, M., Itou, H., Watanabe, N., Yumoto, F., Tanakura, M., Tanaka, I.: "The three-dimensional structure of septum site-determining protein MinD from Pyrococcus horikoshii OT3 in complex with Mg-ADP"Structure. 9・9. 817-826 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Yumoto, F., Nara, M., Kagi, H., Iwasaki, W., Ojima, T., Nishita, K., Nagata, K., Tanokura, M.: "Coordination structures of Ca^<+2> and Mg^<2+> in Akazara scallop troponin C in Solution : FTIR spectroscopy of side-chain COO^- Groups"European Journal of Biochemistry. 268. 6284-6290 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Tanaka, S., Ataka, M., Kubota, T., Soga, T., Homma, K., Lee, W.C., Tanokura, M.: "The effect of amphiphillic additives on the growth and morphology of Aspergillus niger acid proteinase A crystals"Journal of Crystal Growth. 234. 247-254 (2002)

    • Related Report
      2001 Annual Research Report
  • [Publications] Kato, Y., Ito, M., Kawai, K., Nagata, K., Tanokura, M.: "Determinants of ligand specificity in groups I and IV WW domains as studied by surface plasmon resonance and model building"Journal of Biological Chemistry. 277(in press). (2002)

    • Related Report
      2001 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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