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Functional genomics approach toward identification of pollen-part factor of self-incompatibility in the rosaceous fruit trees.

Research Project

Project/Area Number 13660011
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionYokohama City University

Principal Investigator

SASSA Hidenori  Kihara Institute for Biological Research, Assistant Professor, 木原生物学研究所, 助手 (50295507)

Project Period (FY) 2001 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2003: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2002: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2001: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordsself-incompatibility / pistil / pollen / RNase / F-box protein / Rosaceae / ubiquitin / almond / 自家不和合成 / コスミド / ナシ
Research Abstract

Pollen-pistil interaction in self-incompatibility (Sl) represents a self-recognition mechanism of flowering plants that lack immune system. The goal of this research is to clarifying the molecular basis of Sl. Sl has been genetically explained by a single S locus with multiple alleles. However, recent findings indicate that Sl reaction of pistil and pollen are controlled by tightly linked different genes, pistil-S and pollen-S genes, respectively. In the three families, Solanaceae, Rosaceae and Scrophulariaceae, the pistil-S gene product is a ribonuclease, S-RNase. Identity of pollen-S gene has long been unknown, and the central issue of this research area.
In this study, the S-locus region of a rosaceous fruit tree almond (Prunus dulcis) was extensively characterized to identify pollen-S gene. Through cloning and sequencing of a the S-locus region, a novel pollen-expressed F-box protein gene with haplotype-specific polymorphism was identified. The gene was named SFB for S-haplotype specific F-box protein gene. The characteristics of SFB, proximal location to the S-RNase gene, high level of sequence diversity among alleles, and pollen-specific expression pattern, suggest that it is the first candidate for the pollen-S gene of the S-RNase-based Sl system. The F-box protein is known as a component of SCF complex, a class of E3 ubiquitin ligase. The finding of a new F-box protein gene as the first candidate of pollen-S gene implicates that ubiquitin/proteasome pathway of protein degradation plays a central role in self-incompatibility reaction.

Report

(4 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • 2001 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Ushijima, K.et al.: "Characterization of the S-locus region of almond (Prunus dulcis) : Analysis of a somaclonal mutant and a cosmid contig for an S haplotype"Genetics. 158. 379-386 (2001)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikeda, K.et al.: "Primary structural features of the S haplotype-specific F-box protein, SFB, in Prunus"Sex.Plant Reprod.. 16. 235-243 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamane, H.et al.: "A pollen-expressed gene for a novel protein with an F-box motif that is very tightly linked to a gene for S-RNase in two species of cherry, Prunus cerasus and P.avium."Plant Cell Physiol. 44. 764-769 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamane, H.et al.: "The use of S haplotype-specific F-box protein gene, SFB, as a molecular marker for S-haplotype and self-compatibility in Japanese apricot (Prunus mume)."Theor Appl Genet. 107. 1357-1361 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ushijima, K.et al.: "Structural and transcriptional analysis of the self-incompatibility locus of almond : Identification of a pollen-expressed F-box gene with haplotype-specific polymorphism"Plant Cell. 15. 771-781 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ushijima, K.et al.: "Structural and transcriptional analysis of the self-incompatibility locus of almond : identification of a pollen-expressed F-box gene with haplotype-specific polymorphism."Plant Cell. 15. 771-781 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikeda, K.et al.: "Primary structural features of the S haplotype-specific F-box protein, SFB, in Prunus."Sex Plant Reprod. 16. 235-243 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamane, H.et al.: "A pollen-expressed gene for a novel protein with an F-box motif that is very tightly linked to a gene for S-RNase in two species of cherry, Prunus cerasus and avium."Plant Cell Physiol. 44. 764-769 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamane, H.et al.: "The use of S haplotype-specific F-box protein gene, SFB, as a molecular marker for S-haplotype and self-compatibility in Japanese apricot (Prunus mume)."Theor Appl Genet. 107. 1357-1361 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Sassa, H.et al.: "A pistil-specific thaumatin/PR5-like protein gene of Japanese pear (Pyrus serotina) : sequence and promoter activity of the 5' region in transgenic tobacco."Plant Mol.Biol.. 50. 371-377 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ushijima, K.et al.: "Characterization of the S-locus region of almond (Prunus dulcis) : analysis of a somaclonal mutant and a cosmid contig for an S haplotype."Genetics. 158. 379-386 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ushijima, K. et al.: "Structural and transcriptional analysis of the self-incompatibility locus of almond : Identificatiou of a pollen-expressed F-box gene with haplotype-specific polymo"Plant Cell. 15. 771-781 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ikeda, K. et al.: "Primary structural features of the S haplotype-specific F-box protein, SFB, in Prunus"Sex.Plant Reprod.. 16. 235-243 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamane, H. et al.: "A pollen-expressed gene for a novel protein with an F-box motif that is very tightly linked to gene for S-RNase in two species of cherry, Prunus cerasus and P.avium"Plant Cell Physiol. 44. 764-769 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamane, H. et al.: "The use of S haplotype-specific F-box protein gene, SFB, as a molecular marker for S-haplotype and self-compatibility in Japanese apricot (Prunus mume)"Theor Appl Genet. 107. 1357-1361 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sassa, H., et al.: "A pistil-specific thaumatin/PR 5-like protein gene of Japanese pear (Pyrus serotina):sequence and promoter activity of the 5' region in transgenic tobacco"Plant Molecular Biology. 50. 371-377 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ushijima, K., et al.: "Structural and transcriptional analysis of the self-incompatibility locus of almond : Identification of a pollen-expressed F-box gene with haplotype-specific polymorphism"Plant Cell. 15. 771-781 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ushijima, K. et al.: "Characterization of the S-locus region of almond (Prunus dulcis): analysis of a somaclonal mutant and cosmid contig for an S haplotype"GENETICS. 158. 379-386 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Oguchi, S. et al.: "OsPAA1, a distinct αl subunit gene for the 205 proteasome in rice (Oryza sativa L.)"Gene. 272. 19-23 (2001)

    • Related Report
      2001 Annual Research Report
  • [Publications] Sassa, H, et al.: "A pistil-specific thaumatin/PR 5-like protein gene of Japanese pear (Pyrus serotina) : sequence and promoter activity of the 5' region in transgenic tobacco"Plant Molecular Biology. (印刷中).

    • Related Report
      2001 Annual Research Report

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Published: 2001-04-01   Modified: 2016-04-21  

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