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Chemical approach for the structure and function of key compounds in innate immunity

Research Project

Project/Area Number 14380288
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioorganic chemistry
Research InstitutionOsaka University

Principal Investigator

KUSUMOTO Shoichi  Osaka University Graduate School of Science, Professor, 大学院・理学研究科, 教授 (30028253)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥15,200,000 (Direct Cost: ¥15,200,000)
Fiscal Year 2003: ¥4,800,000 (Direct Cost: ¥4,800,000)
Fiscal Year 2002: ¥10,400,000 (Direct Cost: ¥10,400,000)
KeywordsLipopolysaccharide / Endotoxin / Lipid A / Peptidoglycan / Muramylpeptide / Receptor / Bioactivity / Innate immunity / 免疫増強活性 / 複合糖質 / 化学合成
Research Abstract

Bacterial cell wall components have been known as potent immunostimulator for animals. In this research, we investigated to understand the recognition mechanism of the immunostimulation based on the chemical structure of the bacterial cell wall components such as muramyldipeptide (MDP) of peptidoglycan, and lipid A, a glycolipid part of lipopolisaccharide, which we had revealed as the minimal active components for the immunostimulation.
Since the discovery of MDP as the active component, the receptor of MDP have been investigated by many researchers, and we found that N0D2, which was found in animal cells by Inohara at University of Michigan, is the receptor for MDR We demonstrated with synthetic compounds that N0D2 also recognizes the bigger structure having MDP with tetrasaccharide or octasaccharide and it leads to activate the immune system. We also found NODI, which is in cytoplasm of animal cells, is the receptor of peptides containing diaminopimeric acid, a component of gram-negative bacterial peptidoglycan. On the other hand, it was shown that TLR2, a receptor on membrane of animal immune cells, recognizes the peptidoglycan partial structures modified with hydrophobic group.
Lipopolysaccharide and its active moiety lipid A had known as the ligand of TLR4. In order to understand the activation mechanism, we investigated the role of MD2, which is a protein coupled with TLR4, as the collaboration with Miyake at the University of Tokyo, and found TLR4-MD2 complex is a real functional receptor of lipopolysaccharide and lipid A. We also synthesized a series of lipid A analogues that show antagonistic or endotoxic activity, and tried to analyze the structural characteristic of the endotoxic and antagonistic activity with the molecular modeling calculation and observation of the bioactivity.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (57 results)

All Other

All Publications (57 results)

  • [Publications] N.Inohara: "Host recognition of bacterial muramyl dipeptide mediated through NO2."J.Biol.Chem.. 278・8. 5509-5512 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Chamaillard: "An essential role for NOD1 in host recognition of bacterial peptidoglycan containing diaminopimelic acid."Nature Immunol.. 4・7. 702-707 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Z-M.Wang: "Human peptidoglycan recognition protein-L is an N-acetylmuramoyl-L-alanine amidase."J.Biol.Chem.. 278・49. 49044-49052 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Fukase: "Synthesis and biological activities of lipid A analogs possessing b-glycosidic linkage at 1-position."Bull.Chem.Soc.Jpn.. 76・3. 485-500 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Ogawa: "Endotoxic and immunobiological activities of a chemically synthesized lipid A of Helicobacter pylori strain 206-1."FEMS Immunol.Med.Microbiol.. 36. 1-7 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Haase: "A Dominant Role of Toll-Like Receptor 4 in the Signaling of Apoptosis in Bacteria-Faced-Macrophages"J.Immunol.. 171・8. 4294-4303 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Tamai: "Cell activation by monosaccharide lipid A analogues utilizing Toll-like receptor 4."Immunol.. 110・1. 66-72 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Heine: "CD55/decay accelerating factor is part of the lipopolysaccharide-induced receptor complex."Eur.J.Immunol.. 3・5. 1399-1408 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Akashi: "Lipopolysaccharide interaction with cell surface Toll-like receptor 4-MD-2 : Higher affinity than that with MD-2 or CD14."J.Exp.Med.. 198・7. 1035-1042 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Kusumoto: "Structural basis for endotoxic and antagonistic activities : investigation with novel synthetic lipid A analogs"J.Endotoxin Res.. 9・6. 361-366 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Hashimoto: "Structural study on lipid A and the O-specific polysaccharide of thelipopolysaccharide from a clinical isolate of Bacteroides vulgatus from a patient with Crohn's disease"Eur.J.Biochem.. 269. 3715-3721 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Izumi: "Solid-phase synthesis of oligosaccharides using novel alkyne-type linkers : selection of reactive sites on the support by sonogashira reaction."Synlett.. 2002・9. 1409-1416 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Zeuke: "TLR4-mediated inflammatory activation of human coronary artery endothelial cells by LPS."Cardiovase.Res.. 56・1. 126-134 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Izumi: "TMSCI as a mild and effective source of acidic catalysis in fischer glycosidation and use of propargyl glycoside for anomeric protection."Biosci.Biotechnol.Biochem.. 66・1. 211-214 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.-J.Ma: "A direct continuous spectrophotometric assay for glycosidases with 3-nitro-2-pyridyl glycosides by tautomerization of 2-hydroxy-3-nitropyridine."Anal.Biochem.. 302. 291-297 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Wakao: "Chemical synthesis of cyclodextrins by using intramolecular glycosylation."J.Org.Chem.. 67・23. 8182-8190 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Kim: "Structural analyses of lipid A moiety from various Helicobacter pylori strains and their novel immunobiological activities."Acta Med.Hyogo. 27(1). 51-68 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Akamatsu: "New efficient route for solid-phase synthesis of benzimidazole derivatives."J.Comb.Chem.. 4・5. 475-483 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Akamatsu: "Reactivity switching on solid support : solid-phase synthesis of tertiary amines by reduction of tertiary amides with LiAlH_4"Tetrahedron Lett.. 43・49. 8867-8869 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] N.Inohara, Y.Ogura, A.Fontalba, O.Gutierrez, F.Pons, J.Crespo, K.Fukase, S.Inamura, S.Kusumoto, M.Hashimoto, S.J.Foser, A.P.Moran, J.L.Feriiandez-Luna, G.Nunez.: "Host recognition of bacterial muramyl dipeptide mediated through N0D2."J.Biol.Chem.. 278(8). 5509-5512 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Chamaillard, M.Hashimoto, Y.Horie, J.Masumoto, S.M Qiu, L.Saab, Y.Ogura, A.Kawasaki, K.Fukase, S.Kusumoto, M.A.Valvano, S.J.Foster, T.W.Mak, G.Nunez, N.Inohara.: "An essential role for NODI in host recognition of bacterial peptidoglycan containing diaminopimelic acid."Nature Immunol.. 4(7). 702-707 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Z-M.Wang, X.Li, R.R.Cocklin, M.Wang, M.Wang, K.Fukase, S.Inamura, S.Kusumoto, D.Gupta, R.Dziarski.: "Human peptidoglycan recognition protein-L is an N-acetylmuramoyl-L-alanine amidase."J.Biol.Chem.. 278(49). 49044-49052 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] K.Fukase, A.Ueno, Y.Fukase, M.Oikawa, Y.Suda, S.Kusumoto.: "Synthesis and biological activities of lipid A analogs possessing b-glycosidic linkage at 1-position"Bull.Chem.Soc.Jpn.. 76(3). 485-500 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Ogawa, Y.Asai, Y.Sakai, M.Oikawa, K.Fukase, Y.Suda, S.Kusumoto, T.Tamura.: "Endotoxic and immunobiological activities of a chemically synthesized lipid A of Helicobacter pylori strain 206-1."FEMS Immunol.Med.Microbiol.. 36. 1-7 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Haase, C.J.Kirschning, A.Sing, P.Schroettner, K.Fukase, S.Kusumoto, H.Wagner, J.Heesemann, K.Ruckdeschel.: "A Dominant Role of Toll-Like Receptor 4 in the Signaling of Apoptosis in Bacteria-Faced Macrophages."J.Immunol.. 171(8). 4294-4303 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Tamai, Y.Asai, M.Hashimoto, K.Fukase, S.Kusumoto, H.Ishida, M.Kiso, T.Ogawa.: "Cell activation by monosaccharide lipid A analogues utilizing Toll-like receptor 4."Immunol.. 110(1). 66-72 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Heine, V.T.El-Samalouti, C.Notzel, A.Pfeiffer, A.Lentschat, S.Kusumoto, G.Schmitz, L.Hamann, A.J.Ulmer.: "CD55/decay accelerating factor is part of the lipopolysaccharide-induced receptor complex."Eur.J.Immunol.. 3(5). 1399-1408 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Akashi, S.Saitoh, Y.Wakabayashi, T.Kikuchi, N.Takamura, Y.Nagai, Y.Kusumoto, K.Fukase, S.Kusumoto, Y.Adachi, A.Kosugi, K.Miyake.: "Lipopolysaccharide interaction with cell surface Toll-like receptor 4-MD-2: Higher affinity than that with MD-2 or CD14."J.Exp.Med.. 198(7). 1035-1042 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Kusumoto, K.Fukase, Y.Fukase, M.Kataoka, H.Yoshizaki, K.Sato, M.Oikavva, Y.Suda.: "Structural basis for endotoxic and antagonistic activities: investigation with novel synthetic lipid A analogs."J.endotoxin Res.. 9(6). 361-366 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Hashimoto, F.Kirikae, T.Dohi, S.Adachi, S.Kusumoto, Y.Suda, T.Fujita, H.Naoki, T.Kirikae.: "Structural study on lipid A and the O-specific polysaccharide of the lipopolysaccharide from a clinical isolate of Bacteroides vulgatus from a patient with Crohn's disease."Eur.J.Biochem.. 269. 3715-3721 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Izumi, K.Fukase, S.Kusumoto: "Solid-phase synthesis of oligosaccharides using novel alkyne-type linkers: selection of reactive sites on the support by sonogashira reaction."Synlett. 2002(9). 1409-1416

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.Zeuke, S.J.Ulmer, S.Kusumoto, H.A.Katus, H.Heine.: "TLR4-mediated inflammatory activation of human coronary artery endothelial cells by LPS."Cardiovasc.Res.. 56(1). 126-134 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Izumi, K.Fukase, S.Kusumoto.: "TMSCI as a mild and effective source of acidic catalysis in fischer glycosidation and use of propargyl glycbside for anomeric protection."Biosci.Biotechnol.Biochem.. 66(1). 211-214 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] S.-J.Ma, J.Hiratake, Y.Nakai, M.Izumi, K.Fukase, S.Kusumoto, K.Sakata.: "A direct continuous spectrophotometric assay for glycosidases with 3-nitro-2-pyridyl glycosides by tautomerization of 2-hydroxy-3-nitropyridine."Anal.Biochem.. 302. 291-297 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] M.Wakao, K.Fukase, S.Kusumoto.: "Chemical synthesis of cyclodextrins by using intramolecular glycosylation."J.Org.Chem.. 67(23). 8182-8190 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Y.Kim, K.Nagata, Y.Suda, S.Kusumoto, T.Tamura, T.Shimoyama.: "Structural analyses of lipid A moiety from various Helicobacter pylori strains and their novel immunobiological activities."Acta.Med.Hyogo. 27(1). 51-68 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Akamatsu, K.Fukase, S.Kusumoto.: "New efficient route for solid-phase synthesis of benzimidazole derivatives."J.Comb.Chem.. 4(5). 475-483 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Akamatsu, S.Kusumoto, K.Fukase.: "Reactivity switching on solid support: solid-phase synthesis of tertiary amines by reduction of tertiary amides with LiAIH_4."Tetrahedron Lett.. 43(49). 8867-8869 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] N.Inohara: "Host recognition of bacterial muramyl dipeptide mediated through NOD2."J.Biol.Chem.. 278・8. 5509-5512 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] M.Chamaillard: "An essential role for NOD1 in host recognition of bacterial peptidoglycan containing diaminopimelic acid."Nature Immunol.. 4・7. 702-707 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Z-M.Wang: "Human peptidoglycan recognition protein-L is an N-acetylmuramoyl-L-alanine amidase."J.Biol.Chem.. 278・49. 49044-49052 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Fukase: "Synthesis and biological activities of lipid A analogs possessing β-glycosidic linkage at 1-position."Bull.Chem.Soc.Jpn.. 76・3. 485-500 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Ogawa: "Endotoxic and immunobiological activities of a chemically synthesized lipid A of Helicobacter pylori strain 206-1."FEMS Immunol.Med.Microbiol.. 36. 1-7 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] R.Haase: "A Dominant Role of Toll-Like Receptor 4 in the Signaling of Apoptosis in Bacteria-Faced Macrophages."J.Immunol.. 171・8. 4294-4303 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] R.Tamai: "Cell activation by monosaccharide lipid A analogues utilizing Toll-like receptor 4."Immunol.. 110・1. 66-72 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Heine: "CD55/decay accelerating factor is part of the lipopolysaccharide-induced receptor complex."Eur.J.Immunol.. 33・5. 1399-1408 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Akashi: "Lipopolysaccharide interaction with cell surface Toll-like receptor 4-MD-2: Higher affinity than that with MD-2 or CD14."J.Exp.Med.. 198・7. 1035-1042 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] S.Kusumoto: "Structural basis for endotoxic and antagonistic activities : investigation with novel synthetic lipid A analogs."J.Endotoxin Res.. 9・6. 361-366 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] M.Hashimoto: "Structural study on lipid A and the O-specific polysaccharide of the lipopolysaccharide from a clinical isolate of Bacteroides vulgatus from a patient with Crohn's disease"Eur. J. Biochem. 269. 3715-3721 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Izumi: "Solid-Phase synthesis of oligosaccharides using novel alkyne-type linkers : selection of reactive sites on the support by sonogashira reaction"Synlett. 2002 9. 1409-1416 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Izumi: "TMSCI as a mild and effective source of acidic catalysis in fischer glycosidation and use of propargyl glycoside for anomeric protection"Biosci. Biotechnol. Biochem. 66 1. 211-214 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.-J.Ma: "A direct continuous spectrophotometric assay for glycosidases with 3-nitro-2-pyridyl glycosides by tautomerization of 2-hydroxy-3-nitropyridine"Anal. Biochem. 302. 291-297 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] M.Wakao: "Chemical synthesis of cyclodextrins by using intramolecular glycosylation"J. Org. Chem. 2002 67. 8182-8190 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Kim: "Structural analyses of lipid A moiety from various Helicobacter pylori strains and their novel immunobiological activities"Acta Med. Hyogo. 27 1. 51-68 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Akamatsu: "New efficient route for solid-phase synthesis of benzimidazole derivatives"J. Comb. Chem. 2002 4. 475-483 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Akamatsu: "Reactivity switching on solid support : solid-phase synthesis of tertiary amines by reduction of tertiary amides with LiAIH_4"Tetrahedron Lett.. 43 49. 8867-8869 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] S.Kusumoto: "Synthetic chemistry and function of bacterial cell surface glycoconjugates"J. Chin. Chem. Soc.. 49 4. 453-458 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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