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Protein engineering for conferring a biological function on ovalbumin

Research Project

Project/Area Number 15380229
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied molecular and cellular biology
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

HIROSE Masaaki  Kyoto University, The Graduate School of Agriculture, Professor, 農学研究科, 教授 (60026523)

Co-Investigator(Kenkyū-buntansha) TAKAHASHI Nobuyuki  Kyoto University, The Graduate School of Agriculture, Instructor, 農学研究科, 助手 (20252520)
MIZUTANI Kimihiko  Kyoto University, The Graduate School of Agriculture, Instructor, 農学研究科, 助手 (40314281)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥12,000,000 (Direct Cost: ¥12,000,000)
Fiscal Year 2004: ¥5,800,000 (Direct Cost: ¥5,800,000)
Fiscal Year 2003: ¥6,200,000 (Direct Cost: ¥6,200,000)
Keywordsovalbumin / serpin / loop insertion / conformation change / protease inhibition / タンパク質工学 / 卵白タンパク質 / セリンプロティナーゼ
Research Abstract

Ovalbumin is a member of serpin superfamily, but it does not have any proteinase inhibitor activity. We have done site-directed mutagenesis approach to confer serpin function on ovalbumin. We found by X-ray crystallography that an ovalbumin mutant R339T has an ability to undergo a serpin loop insertion after the P1-P1' cleavage by elastase. This was an important finding for the achievement of our aim, but the mutant did still not have an inhibitory activity against a protease. For further mutagenesis approach, we created a different ovalbumin mutant R339T/A352R in which the P1-P1' site is accessible against trypsin. Utilizing the mutant, a reliable HPLC analysis for the determination of the loop insertion rate was established. Because of the structural and functional situations of serpin, increased loop insertion rate should lead to the acquisition of the inhibitory activity. We therefore did further mutagenesis to accelerate the loop insertion rate on the basis of the data of crystal structure. Alternative mutants, K290T/A352R/R339T and R104/A352R/R339t, and the disulfide-reduced form of A352R/R339T, respectively, displayed 1.5, 3.7, and 6.7- fold increase in the loop insertion rate as compared A352R/R339T control. The mutation and disulfide reduction should give a more flexible nature on the distal sheet A structure. We therefore concluded that the transition state of the serpin loop insertion reaction assumes an opened sheet A conformation.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (14 results)

All 2005 2003 Other

All Journal Article (8 results) Book (2 results) Publications (4 results)

  • [Journal Article] Thermostability of refolded ovalbumin and S-ovalbumin.2005

    • Author(s)
      N.Takahashi
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry (発表予定)

    • NAID

      130000030322

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Dynamic mechanism for the serpin loop insertion as revealed by quantitative kinetics.2005

    • Author(s)
      N.Takahashi
    • Journal Title

      Journal of Molecular Biology (発表予定)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Thermostability of refolded ovalbumin and S-ovalbumin.2005

    • Author(s)
      N.Takahashi
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry (in press)

    • NAID

      130000030322

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Dynamic mechanism for the serpin loop insertion as revealed by quantitative kinetics.2005

    • Author(s)
      N.Takahashi
    • Journal Title

      Journal of Molecular Biology (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Refolding mechanism of ovalbumin : Investigation by using a starting urea-denatured disulfide isomer with mispaired Cys367-Cys382.2003

    • Author(s)
      M.Onda
    • Journal Title

      The Journal of Biological Chemistry 278-26

      Pages: 23600-23609

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Crystal structure of S-ovalbumin as a non-loop-inserted thermostabilized serpin form.2003

    • Author(s)
      M.Yamasaki
    • Journal Title

      The Journal of Biological Chemistry 278・37

      Pages: 35524-35530

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Refolding mechanism of ovalbumin : Investigation by using a starting urea-denatured disulfide isomer with mispaired Cys367-Cys382.2003

    • Author(s)
      M.Onda
    • Journal Title

      The Journal of Biological Chemistry 278(26)

      Pages: 23600-23609

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Crystal structure of S-ovalbumin as a non-loop-inserted thermostabilized serpin form.2003

    • Author(s)
      M.Yamasaki
    • Journal Title

      The Journal of Biological Chemistry 278(37)

      Pages: 35524-35530

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Egg white proteins-ovalbumin. in Progress in Biotechnology 23 (Industrial Proteins in Perspective)(ed. Aalbersberg et al.)2003

    • Author(s)
      M.Hirose
    • Total Pages
      4
    • Publisher
      Elsevier
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Progress in Biotechnology 23(Indus-trial Proteins in Perspective, ed. Aalversberg et al.)

    • Author(s)
      M.Hirose
    • Total Pages
      23
    • Publisher
      Egg white proteins-ovalbumin.
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Yasuhiro Arai: "Periplasmic Secretion of Native Ovalbumin without Signal Cleavage in Escherichia coli"Bioscience, Biotechnology, and Biochemistry. 67・2. 368-371 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hiroki Yamamoto: "Thermostabilization of Ovalbumin by Alkaline Treatment : Examination for the Possible Implications of Altered Serpin Loop Structures"Bioscience, Biotechnology, and Biochemistry. 67・4. 830-837 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Maki Onda: "Refolding Mechanism of Ovalbumin"The Journal of Biological Chemistry. 278・26. 23600-23609 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Masayuki Yamasaki: "Crystal structure of S-ovalbumin as a Non-loop-inserted Thermostabilized Serpin Form"The Journal of Biological Chemistry. 278・37. 35524-35530 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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