Investigation on determinants of substrate specificities of nucleotide-sugar transporters
| Project/Area Number |
15570105
|
|---|
| Research Category |
Grant-in-Aid for Scientific Research (C)
|
| Allocation Type | Single-year Grants |
|---|
| Section | 一般 |
|---|
| Research Field |
Structural biochemistry
|
|---|
| Research Institution | Chiba Institute of Science, Faculty of Risk and Crisis Management (2005)
Tokyo Metropolitan Organization for Medical Research (2003-2004) |
|---|
Principal Investigator |
ISHIDA Nobuhiro Chiba Inst.of Sci., Fac.of Risk and Crisis Manage., Prof., 危機管理学部, 教授 (20291148)
|
|---|
| Project Period (FY) |
2003 – 2005
|
| Project Status |
Completed (Fiscal Year 2005)
|
| Budget Amount *help |
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2005: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2004: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2003: ¥1,500,000 (Direct Cost: ¥1,500,000)
|
|---|
| Keywords | glycoconjugate / nucleotide-sugar / nucleotide-sugar transporter / Golgi apparatus / endoplasmic reticulum / SLC35 / fringe connection / SQV-7 / 糖鎖 / グライコバイオロジー / 糖供与体 / fringe connectio |
|---|
| Research Abstract |
Nucleotide sugar transporters are very hydrophobic proteins ranging from 340 a.a. to 400 a.a. long. They reside in Golgi apparatus and/or ER membrane exposing their C- and N-terminal regions to cytosol, and are highly likely to have ten transmembrane helices. They antiport nucleotide sugars pooled in cytosol into lumen of Golgi apparatus and/or ER lumen with the corresponding nucleoside monophosphates. The transported nucleotide sugars are utilized as sugar donors by glycosyltransferases for synthesis of sugar chains of glycoproteins. glycolipids and polysaccharides.
Nucleotide-sugar transporter genes constitute a gene family that was assigned as SLC (solute carrier)35 family by the HUGO gene nomenclature committee. We carried out data mining of the gene databank, and found 23 human genes which shows significant similarity each others. We classified them into 6 subfamilies, from A to F, based on their similarity, and provided the gene symbol to each of the genes.
We had found hUGTrel8 (S
… More
LC35D2) gene that exhibits around 50% similarity with human SLC35D1 (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter), fruitfly fringe connection (frc) transporter, and nematode SQV-7 transporter, the latter two being involved in developmental and ontological processes. We demonstrated that SLC35D2 was localized in the Golgi apparatus and transported UDP-N-acetylglucosamine. These observations indicate that SLC35D2 is a good candidate for the ortholog of frc transporter.
We also biochemically demonstrated that a Drosophila homolog of the human GDP-fucose transporter, the Golgi GDP-fucose transporter (Gfr), specifically transport GDP-fucose in vitro, and generated null mutants of Gfr in Drosophila. The phenotypes of the Drosophila Gfr mutants were rescued by the human GDP-fucose transporters. Hence, these null mutants are good Drosophila models of CDGIIc patients who have defective GDP-fucose transporter to investigate the possible cause of the developmental defects in the patients. Less
|
Report
(4 results)
Research Products
(21 results)
-
-
[Journal Article] Identification and characterization of human Golgi nucleotide sugar transporter SLC35D2, a novel member of the SLC35 nucleotide sugar transporter family2005
Author(s)
Ishida, N., Kuba, T., Aoki, K., Miyatake, S., Kawakita, M., Sanai, Y.
-
Journal Title
Genomics 85
Pages: 106-116
Description
「研究成果報告書概要(和文)」より
Related Report
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
