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Molecular Spin Systems Based on Nucleobases

Research Project

Project/Area Number 15K13681
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Functional solid state chemistry
Research InstitutionOsaka City University

Principal Investigator

SHIOMI Daisuke  大阪市立大学, 大学院理学研究科, 准教授 (40260799)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords核酸 / ラジカル / スピン / 磁性体 / 分子力学法 / 分子力場計算 / DNA
Outline of Final Research Achievements

We propose an approach to rationalized organization of open-shell molecules, which is based on hydrogen-bonded nucleobases as found in DNA. Bio-inspired motifs of the hydrogen bonding lead to controllable organization of spin-labeled nucleobases, giving molecular magnetic systems. An aspect of the bio-inspired magnetics is complexation with single-stranded oligonucleotides (SS-DNA). The closed-shell SS-DNA can be a template for organization of the open-shell molecules, where the spin-labeled nucleobases should be assembled according to the base sequence of DNA. We have designed a series of nitronyl nitroxide radicals substituted with nucleobases such as cytosine (C), guanine (G), adenine (A), thymine (T), diaminotriazine (dAt), and isocytosine (iC). Molecular mechanics calculations have shown that dAt and iC bases give stable complexes with SS-DNA in water. Possibilities of rationalized organization of spin-labeled nucleobases as building blocks of molecular magnets are discussed.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (13 results)

All 2017 2016 2015

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (12 results) (of which Int'l Joint Research: 5 results)

  • [Journal Article] Structural Determination of a DNA Oligomer for a Molecular Spin Qubit Lloyd model of Quantum Computers2017

    • Author(s)
      S. Yamamoto, S. Nakazawa, K. Sugsaki, K. Maekawa, K. Sato, K. Toyota, D. Shiomi and T. Takui
    • Journal Title

      Zeitschrift fuer Physikalische Chemie

      Volume: 231 Issue: 2 Pages: 439-458

    • DOI

      10.1515/zpch-2016-0799

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] マイクロ波フォトンとの強結合系スピンデバイスとなる直結開殻置換基を持つ安定ニトロキシド三重項分子の磁気テンソルと量子化学計算2017

    • Author(s)
      澤田駿,中澤重顕,河盛萌子,杉崎研司,豊田和男,塩見大輔,佐藤和信,尾向宏介,古井孝宜,倉津将人,鈴木修一,小嵜正敏,岡田惠次,工位武治
    • Organizer
      日本化学会第96春季年会
    • Place of Presentation
      慶應義塾大学(神奈川・横浜)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] 量子計算に向けた分子スピン系の最適パルスの研究2016

    • Author(s)
      山本悟, 佐藤和信, 山根健史, 柴田大貴, 杉崎研司, 中澤重顕, 豊田和男,塩見大輔, 工位武治
    • Organizer
      第55回電子スピンサイエンス学会年会
    • Place of Presentation
      大阪市立大学(大阪・大阪)
    • Year and Date
      2016-11-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular Optimization for Molecular-Spin Based Quantum Computers: Simulations of Multiple Quantum Gates by Optimal Microwave Pulses2016

    • Author(s)
      T. Shibata, S. Yamamoto, S. Nakazawa, E. Hosseini, K. Sugisaki, K. Maruyama, K. Toyota, D. Shiomi, K. Sato, T. Takui
    • Organizer
      The 15th International Conference on Molecule-Based Magnets
    • Place of Presentation
      仙台国際センター(宮城・仙台)
    • Year and Date
      2016-09-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Emerging electron spin technology for quantum computing/quantum information processing: Quantum control as indirect implementation of hyperfine-qubit quantum gates2016

    • Author(s)
      T. Shibata, E. Hosseini, S. Nakazawa, S. Yamamoto, K. Sugisaki, K. Maruyama, K. Toyota, D. Shiomi, K. Sato and T. Takui
    • Organizer
      The 49th Annual International Meeting of the ESR Spectroscopy Group of the Royal Society of Chemistry
    • Place of Presentation
      Colchester (UK)
    • Year and Date
      2016-04-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 分子スピン量子コンピュータのための分子最適化: マイクロ波パルスのみによる多量子ゲート操作のシミュレーション2016

    • Author(s)
      柴田大貴・山本悟・中澤重顕・ホセイニエルハム・杉崎研司・丸山耕司・豊田和男・塩見大輔・佐藤和信・工位武治
    • Organizer
      日本化学会第96春季年会
    • Place of Presentation
      同志社大学(京都・京田辺)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Research-status Report
  • [Presentation] ESR/ENDOR法を用いたホスホニウム基を有する安定なナフタレンジイミドラジカルイオンの電子構造の解明2016

    • Author(s)
      巽俊輔・杉崎研司・佐藤和信・豊田和男・塩見大輔・SHARVAN Kumar・SUDHIR Kumar Keshri・PRITAM Mukhopadhyay・工位武治
    • Organizer
      日本化学会第96春季年会
    • Place of Presentation
      同志社大学(京都・京田辺)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Research-status Report
  • [Presentation] Molecular optimization for molecular-spin based quantum computers: Simulations of CNOT/SWAP gates only by microwave pulses2015

    • Author(s)
      T. Shibata, S. Yamamoto, S. Nakazawa, E. H. Lapasar, K.Sugisaki, K. Maruyama, K. Toyota, D. Shiomi, K. Sato and T. Takui
    • Organizer
      The 9th Japanese-Russian Workshop on Open Shell Compounds and Molecular Spin Devices
    • Place of Presentation
      淡路夢舞台国際会議場 (兵庫・淡路)
    • Year and Date
      2015-11-08
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] A Hyperfine ESR Spectrum of Stable Naphthalene Diimide Radical Ion with Phosphonium Groups in Solution2015

    • Author(s)
      S. Tatsumi, K. Sugisaki, K. Sato, K. Toyota, D. Shiomi, S. Kumar, S. K. Keshri, Y. Kumar, P. Mukhopadhyay, and T. Takui
    • Organizer
      The 9th Japanese-Russian Workshop on Open Shell Compounds and Molecular Spin Devices
    • Place of Presentation
      淡路夢舞台国際会議場 (兵庫・淡路)
    • Year and Date
      2015-11-08
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] ホスホニウム基を有する安定なナフタレンジイミドラジカルイオンのESR及びENDOR法による研究2015

    • Author(s)
      巽俊輔、杉崎研司、佐藤和信、豊田和男、塩見大輔、Sharvan Kumar、Sudhir Kumar Keshri、Yogendra Kumar、Pritam Mukhopadhyay、工位武治
    • Organizer
      第54回電子スピンサイエンス学会年会
    • Place of Presentation
      朱鷺メッセ(新潟・新潟)
    • Year and Date
      2015-11-02
    • Related Report
      2015 Research-status Report
  • [Presentation] 分子スピン量子コンピュータのための量子制御:マイクロ波パルスのみによる多量子ゲート操作の実行2015

    • Author(s)
      柴田大貴・山本悟・中澤重顕・ホセイニ エルハム・杉崎研司・丸山耕司・豊田和男・塩見大輔・佐藤和信・工位武治
    • Organizer
      第54回電子スピンサイエンス学会年会
    • Place of Presentation
      朱鷺メッセ(新潟・新潟)
    • Year and Date
      2015-11-02
    • Related Report
      2015 Research-status Report
  • [Presentation] 分子スピン量子コンピュータのための量子制御:超微細相互作用を利用した多量子ビットゲート操作の実行2015

    • Author(s)
      柴田大貴,山本悟,中澤重顕,Hosseini Elham,杉崎研司,丸山耕司,豊田和男,塩見大輔,佐藤和信,工位武治
    • Organizer
      第9回分子科学討論会
    • Place of Presentation
      東京工業大学(東京・大岡山)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
  • [Presentation] Quantum control for molecular spin quantum computers: Indirect implementation of two-qubit quantum gates by an electron spin qubit2015

    • Author(s)
      T. Shibata, S. Yamamoto, S. Nakazawa, E. H. Lapasar, K. Sugisaki, K. Maruyama, K. Toyota, D. Shiomi, K. Sato and T. Takui
    • Organizer
      The 3rd Awaji International Workshop on Electron Spin Science & Technology
    • Place of Presentation
      淡路夢舞台国際会議場 (兵庫・淡路)
    • Year and Date
      2015-06-14
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

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Published: 2015-04-16   Modified: 2018-03-22  

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