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Interaction between Metallome and Proteome in the Marine Ecosystem

Research Project

Project/Area Number 16204046
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Geochemistry/Astrochemistry
Research InstitutionKyoto University

Principal Investigator

SOHRIN Yoshiki  Kyoto University, Institute for Chemical Research, Professor, 化学研究所, 教授 (50197000)

Co-Investigator(Kenkyū-buntansha) OKAMURA Kei  Kochi University, Center for Advanced Marine Core Research, Associate Professor, 海洋コア総合研究センター, 助教授 (70324697)
NORISUYE Kazuhiro  Kyoto University, Institute for Chemical Research, Assistant Professor, 化学研究所, 助手 (50335220)
SUZUKI Koji  Hokkaido University, Faculty of Environmental Earth Science, Associate Professor, 大学院地球環境科学研究科, 助教授 (40283452)
HASEGAWA Hiroshi  Kanazawa University, Graduate School of Natural Science and Technology, Associate Professor, 大学院自然科学研究科, 助教授 (90253335)
SOHRIN Rumi  Shizuoka University, Faculty of Science, Assistant Professor, 理学部, 助手 (00343195)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥50,310,000 (Direct Cost: ¥38,700,000、Indirect Cost: ¥11,610,000)
Fiscal Year 2006: ¥11,570,000 (Direct Cost: ¥8,900,000、Indirect Cost: ¥2,670,000)
Fiscal Year 2005: ¥11,310,000 (Direct Cost: ¥8,700,000、Indirect Cost: ¥2,610,000)
Fiscal Year 2004: ¥27,430,000 (Direct Cost: ¥21,100,000、Indirect Cost: ¥6,330,000)
KeywordsOceanography / Analytical chemistry / Biogeochemistry / Trace metals / Phytoplankton / Bacteria / Pacific Ocean / Sulu Sea / ベーリング海 / 生物活性 / 南極海
Research Abstract

1.Development of chemical speciation and in situ determination of bioactive trace metals
(1)Determination of suspended particulate Co, Ni, Cu, Zn, Cd and Pb has been developed.
(2)Determination of dissolved and acid-dissolvable Zr, Hf, Nb, Ta and W has been developed.
(3)In-situ flow analysis of alkalinity and total carbonate has been developed.
2.Development of analytical methods for enzymes and proteins of phytoplankton and bacteria
(1)Detection of Fe-S protein PsaC and PsbA(D1) in photosynthetic system has been developed.
(2)Anti-ferredoxin and anti-flavodoxin antibodies, which cross-react with ferredoxin and flavodoxin of marine diatoms, respectively, have been developed using synthetic peptides in order to estimate their Fe stress.
3.Observation of the variation and relationship of metallome and proteome
(1)Different distributions of Fe, Co, Ni, Cu, Zn and Cd in seawater between the Sulu Sea, South China Sea and Pacific Ocean were observed.
(2)During the second mesoscale iron enrichment experiments in the western subarctic North Pacific (SEEDS-II), the effects of iron enrichment on the phytoplankton community structure and the speciation of bioactive trace metals were examined.
(3)On the basis of analysis of photosynthetic proteins, Fe in seawater has been proved to be a major factor controlling the spring bloom of diatoms in the Oyashio region.
(4)Diurnal dynamics of biomass of nano-flagellates and ciliates in Suruga Bay was investigated.
(5)The effects of trace metals on the activity of extracellular enzymes of microbes have been proved.
4.Study on metal uptake mechanism of phytoplankton in culture
(1) The size distribution of Fe in culture media of phytoplankton was investigated. Fe ligands exuded from phytoplankton were analyzed by LC-MS.
(2)Membrane proteins revealed in red tide forming phytoplankton Prymnesium parvum under Fe deficiency were analyzed.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (28 results)

All 2007 2006 2005 2004 Other

All Journal Article (25 results) Book (3 results)

  • [Journal Article] Distribution of bioactive trace metals (Fe, Co, Ni, Cu, Zn and Cd) in the Sulu Sea and its adjacent seas2007

    • Author(s)
      Norisuye, K. et al.
    • Journal Title

      Deep-Sea Research II 54

      Pages: 14-37

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Determination of iron in phytoplankton cultures by radiochemical analysis with ^<55>Fe2007

    • Author(s)
      Okumura, C. et al.
    • Journal Title

      J. Ecotechnol. Res. (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Distribution of bioactive trace metals (Fe, Co, Ni, Cu, Zn and Cd) in the Sulu Sea and its adjacent seas.2007

    • Author(s)
      K.Norisuye.M.Ezoe, S.Nakatsuka, S.Umetani, Y.Sohrin.
    • Journal Title

      Deep-Sea Res. II54

      Pages: 14-37

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Preconcentration of Zr, Hf, Nb, Ta and W in seawater using solid-phase extraction on TSK-8-hydroxyquinoline resin and determination by inductively coupled plasma-mass spectrometry2007

    • Author(s)
      Lutfi Firdaus, M. et al.
    • Journal Title

      Analytica Chimica Acta 583

      Pages: 296-302

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Size distribution and biomass of nanoflagellates in meso- and bathypelagic layers of the subarctic Pacific.2007

    • Author(s)
      Fukuda, H. et al.
    • Journal Title

      Aquat. Microb. Ecol. 46

      Pages: 203-207

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Impact of high iron concentrations of iron uptake and growth of a coastal diatom Chaetoceros sociale2006

    • Author(s)
      Iwade, S. et al.
    • Journal Title

      Aquat. Microb. Ecol. 43

      Pages: 177-191

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Role of heterotrophic dinoflagellate Gyrodinium sp. in the fate of an iron induced diatom bloom2006

    • Author(s)
      Saito, H. et al.
    • Journal Title

      Geophys. Res. Lett. 33,L09602

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Large volume preconcentration and purification for determining the ^<240>Pu/^<239>Pu isotopic ratio and ^<238>Pu/^<239-240>Pu alpha-activity ratio in seawater2006

    • Author(s)
      Norisuye, K. et al.
    • Journal Title

      Journal of Radioanalytical and Nuclear Chemistry 267

      Pages: 183-193

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Dynamics of trace metals during the subarctic Pacific iron experiment for ecosystem dynamics study (SEEDS2001)2005

    • Author(s)
      Kinugasa, M. et al.
    • Journal Title

      Progress in Oceanography 64

      Pages: 129-147

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Responses of phytoplankton and heterotrophic bacteria in the northwest subarctic Pacific to in situ iron fertilization as estimated by HPLC pigment analysis and flow cytometry2005

    • Author(s)
      Suzuki, K. et al.
    • Journal Title

      Progress in Oceanography 64

      Pages: 167-187

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Seasonal variation in total organic carbon in the Northeast Atlantic in 2000-20012005

    • Author(s)
      Sohrin, R., R.Sempere
    • Journal Title

      Journal of Geophysical Research 110, CIOS90

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Dynamics of trace metals during the subarctic Pacific iron experiment for ecosystem dynamics study (SEEDS2001).2005

    • Author(s)
      M.Kinugasa, T.Ishita, Y.Sohrin, K.Okamura, S.Takeda, J.Nishioka, A.Tsuda.
    • Journal Title

      Prog. Oceanogr. 64

      Pages: 129-147

    • NAID

      130004592153

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Responses of phytoplankton and heterotrophic bacteria in the northwest subarctic Pacific to in situ iron fertilization as estimated by HPLC pigment analysis and flow cytometry.2005

    • Author(s)
      K.Suzuki, A.Hinuma, H.Saito, H.Kiyosawa, H.Liu.T.Saino, A.Tsuda.
    • Journal Title

      Prog. Oceanogr. 64

      Pages: 167-187

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Seasonal variation in total organic carbon in the Northeast Atlantic in 2000-2001.2005

    • Author(s)
      R.Sohrin, R.Sempere.
    • Journal Title

      J. Geophys. Res. 110, CIOS90 doi:10.1029/2004JC002731

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Responses of microzooplankton to in situ iron fertilization in the western subarctic Pacific (SEEDS)2005

    • Author(s)
      Saito, H. et al.
    • Journal Title

      Progress in Oceanography 64

      Pages: 223-236

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Seasonal dynamics of dimethylarsinic acid (DMAA) decomposing bacteria dominated in Lake Kahokugata2005

    • Author(s)
      Maki, T., H.Hasegawa, K.Ueda
    • Journal Title

      Applied Organometallic Chemistry 19

      Pages: 231-238

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Seasonal variation in total organic carbon in the Northeast Atlantic in 2000-20012005

    • Author(s)
      Sohrin, R., R.Sempere
    • Journal Title

      Journal of Geophysical Research 110,C10S90

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 微量金属元素と海洋微生物群集の有機物分解活性の関係2005

    • Author(s)
      宗林留美
    • Journal Title

      月刊海洋 39

      Pages: 79-87

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Distributions of dissolved and acid-dissolvable bioactive trace metals in the North Pacific Ocean2004

    • Author(s)
      Ezoe, Masako et al.
    • Journal Title

      Geochemical Journal 38

      Pages: 535-550

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Distributions of dissolved and acid-dissolvable bioactive trace metals in the North Pacific Ocean.2004

    • Author(s)
      M.Ezoe, T.Ishita.M.Kinugasa, X.Lai.K.Norisuye, Y.Sohrin.
    • Journal Title

      Geochem. J. 38

      Pages: 535-550

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Tungsten enriched in submarine hydrothermal fluids2004

    • Author(s)
      Kishida, Koichi et al.
    • Journal Title

      Earth and Planetary Science Letters 222

      Pages: 819-827

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Development of an in situ manganese analyzer using micro-diaphragm pumps and its application to time-series observations in a hydrothermal field at the Suiyo seamount2004

    • Author(s)
      Okamura, Kei et al.
    • Journal Title

      Geochemical Journal 38

      Pages: 635-642

    • NAID

      10014093390

    • Related Report
      2004 Annual Research Report
  • [Journal Article] キレート配位子存在下の植物プランクトン培養液中における鉄のサイズ分画2004

    • Author(s)
      奥村真子
    • Journal Title

      分析化学 53

      Pages: 1215-1221

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Determination of iron in phytoplankton cultures by radiochemical analysis with ^<55>Fe.

    • Author(s)
      C.Okumura, H.Hasegawa, T.Maki, K.Ueda.
    • Journal Title

      J. Ecotechnol. Res. (in press)

    • NAID

      130004956010

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Responses of phytoplankton and heterotrophic bacteria in the northwest subarctic Pacific to in situ iron fertilization as estimated by HPLC pigment analysis and flow cytometry

    • Author(s)
      Suzuki, Koji et al.
    • Journal Title

      Progress in Oceanography (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Book] 第5版実験化学講座 20-2 環境化学2007

    • Author(s)
      日本化学会編
    • Total Pages
      519
    • Publisher
      丸善
    • Related Report
      2006 Annual Research Report
  • [Book] 海と湖の化学-微量元素で探る2005

    • Author(s)
      藤永太一郎ら
    • Total Pages
      560
    • Publisher
      京都大学学術出版会
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 海と湖の化学-微量元素で探る2005

    • Author(s)
      藤永太一郎
    • Total Pages
      560
    • Publisher
      京都大学学術出版会
    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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