Studies on agronomic genes in rice.
| Project/Area Number |
16380001
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| Research Category |
Grant-in-Aid for Scientific Research (B)
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| Allocation Type | Single-year Grants |
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| Section | 一般 |
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| Research Field |
Breeding science
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| Research Institution | HOKKAIDO UNIVERSITY |
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Principal Investigator |
SANO Yoshio Hokkaido Univ., Research Faculty of Agr., Prof., 大学院農学研究院, 教授 (70109528)
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| Co-Investigator(Kenkyū-buntansha) |
KISHIMA Yuji Hokkaido Univ., Research Faculty of Agr., Asso.Prof., 大学院農学研究院, 助教授 (60192556)
TAKMURE Itsuro Hokkaido Univ., Research Faculty of Agr., Inst., 大学院農学研究院, 助手 (90179557)
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| Project Period (FY) |
2004 – 2006
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| Project Status |
Completed (Fiscal Year 2006)
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| Budget Amount *help |
¥15,600,000 (Direct Cost: ¥15,600,000)
Fiscal Year 2006: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2005: ¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 2004: ¥7,700,000 (Direct Cost: ¥7,700,000)
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| Keywords | Useful traits / Genetic diversification / Local adaptation / Nucleotide diversity / Introgression / Genealogy / Green revolution / Waxy gene / イネ / 食味関連遺伝子 / 遺伝資源 / 半矮性遺伝子 |
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| Research Abstract |
The objective of this study is to examine why genetic diversity, especially in agronomic traits, is maintained in crop species. To understand ongoing micro-evolutionary processes, genetic alterations in response to temperature (cold resistance), photoperiod (flowering time) and biotic environments (competition with weeds) were investigated in wild and cultivated rice. The adaptive mechanism in these traits was not well explained by a few major genes, suggesting that epistasis, genotype x environment (GE) interaction and linked genes were involved in addition to genes with a small additive effect. The results showed that the presence of epistasis and GE interaction play a significant role for the maintenance of genetic diversity in rice. Genetic diversity is also affected both by current patterns of micro-evolutionary forces, such as gene flow and selection, and by the phylogenetic history. Genealogies of agronomic genes provided insight into their history. Unexpectedly, "Green Revolution" gene (sd1) preexisted in the wild ancestor, showing that farmers have selected it to obtain a high yield in response to altered practices in agriculture. In contrast, in the case of C, A and wx genes, it was indicated that variants have generated from landraces through natural or artificial selection. These results lead us to consider that each of the genes has a unique history, which might reflect on different patterns of natural and/or artificial selection. It seems that farmers have mined the sd1 allele from the wild population and have maintained it in different landraces, while farmers have selected newly arisen mutations from landraces in the case of C, wx and A genes consciously or unconsciously. Therefore, landraces are also expected to preserve agronomically valuable genes, even if a reduction in nucleotide diversity was caused by the population bottleneck due to domestication.
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Report
(4 results)
Research Products
(22 results)
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[Journal Article] Multiple Forms of α-Glucosidase in Rice Seeds (Oryza sativa L., var Nipponbare)2006
Author(s)
H.Nakai, T.Ito, M.Hayashi, K.Kamiya, T.Yamamoto, K.Matsubara, Young-Min Kim, W.Jintanart, M.Okuyama, H.Mori, S.Chiba, Y.Sano, A.Kimura.
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Journal Title
Biochimie 89
Pages: 49-62
Description
「研究成果報告書概要(欧文)」より
Related Report
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[Journal Article] Multiple Forms of α-Glucosidase in Rice Seeds (Oryza sativa L., var Nipponbare)2006
Author(s)
H.Nakai, T.Ito, M.Hayashi, K.Kamiya, T.Yamamoto, K.Matsubara, Young-Min Kim, W.Jintanart, M.Okuyama, H.Mori, S.Chiba, Y.Sano, A.Kimura
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Journal Title
Biochimie 89
Pages: 49-62
Related Report
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