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Elucidation of the maintenance mechanism of coral populations in the Kuroshio region by seascape genetics and genomics

Research Project

Project/Area Number 16H05621
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Environmental dynamic analysis
Research InstitutionOkinawa Institute of Science and Technology Graduate University

Principal Investigator

NAKAJIMA Yuichi  沖縄科学技術大学院大学, 海洋生態物理学ユニット, 研究員 (50581708)

Co-Investigator(Kenkyū-buntansha) 中村 雅子  東海大学, 海洋学部, 准教授 (50580156)
酒井 一彦  琉球大学, 熱帯生物圏研究センター, 教授 (50153838)
御手洗 哲司  沖縄科学技術大学院大学, 海洋生態物理学ユニット, 准教授 (80567769)
Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥11,960,000 (Direct Cost: ¥9,200,000、Indirect Cost: ¥2,760,000)
Fiscal Year 2019: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Fiscal Year 2018: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2017: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2016: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Keywords海洋生態 / 海洋保全 / 環境
Outline of Final Research Achievements

Degradation of reef-building coral populations has been reported in various regions of the world. In Japan, several coral species inhabit the northern limit of the coral-distribution area. Therefore, even slight environmental disturbances can cause the local extinction of coral populations. Here, we conducted seascape genetic and genomic analyses of coral populations in the Northwest Pacific region, including Japan, to understand the mechanism of coral population maintenance. We focused on reproductive characteristics and the relationship between genotypes and phenotypes at small geographic scales. We constructed a molecular phylogenetic tree using the RAD-Seq data to assess species diversity and proposed the necessity for further research on coral taxonomy. Furthermore, we conducted a population genomic analysis to clarify the population genetic structure among the regions and elucidated the recruitment patterns of coral larvae with the results of ocean current simulation analysis.

Academic Significance and Societal Importance of the Research Achievements

本研究では人為的撹乱によりサンゴの消失が懸念されている北西太平洋域において、サンゴの集団遺伝学、集団ゲノム学解析を中心に研究を進めた。異なる空間的、時間的スケールに着目したことで、サンゴの集団遺伝学に留まらず、繁殖生態学、分類学、海洋物理学など、多岐にわたる分野に関連する成果を得ることができた。これらの成果はサンゴ個体群の動向を予測する上で重要であることから、沿岸生態系において喫緊の課題となっているサンゴの保全にも貢献することが期待される。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Annual Research Report
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (21 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (6 results) Journal Article (3 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (12 results) (of which Int'l Joint Research: 6 results)

  • [Int'l Joint Research] University of Guam(米国)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Ramkamhaeng University(タイ)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Queensland/Curtin University(オーストラリア)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] KAUST(サウジアラビア)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Guam/National Marine Sanctuary American Samoa(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Academia Sinica(台湾)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Metacommunity ecology of Symbiodiniaceae hosted by the coral Galaxea fascicularis2020

    • Author(s)
      Wepfer PH, Nakajima Y, Hui FKC, Mitarai S, Economo EP
    • Journal Title

      Marine Ecology Progress Series

      Volume: 633 Pages: 71-87

    • DOI

      10.3354/meps13177

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] First evidence of asexual recruitment of Pocillopora acuta in Okinawa Island using genotypic identification2018

    • Author(s)
      Nakajima Y, Chuang P-S, Ueda N, Mitarai S
    • Journal Title

      PeerJ

      Volume: 6 Pages: e5915-e5915

    • DOI

      10.7717/peerj.5915

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Microsatellite markers for multiple Pocillopora genetic lineages offer new insights about coral populations2017

    • Author(s)
      Nakajima Y, Wepfer PH, Suzuki S, Zayasu Y, Shinzato C, Satoh N, Mitarai S
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 6729-6729

    • DOI

      10.1038/s41598-017-06776-x

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Spatial genetic structure and phenotypes of Galaxea corals in the Ryukyu Archipelago2020

    • Author(s)
      Nakajima Y, Wepfer PH, Mitarai S
    • Organizer
      2020 Ocean Sciences Meeting
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 琉球列島のアザミサンゴ属の遺伝子型と表現型の関連性2020

    • Author(s)
      中島祐一・Wepfer PH・御手洗哲司
    • Organizer
      日本生態学会第67回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 琉球列島のアザミサンゴの遺伝子型と表現型の関連性2019

    • Author(s)
      中島祐一・Wepfer PH・御手洗哲司
    • Organizer
      沖縄生物学会第56回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 高緯度域サンゴ群集の現状と維持機構の検討2019

    • Author(s)
      中村雅子・福崎扶美・佐野聡・中島祐一・御手洗哲司・目崎拓真
    • Organizer
      2019年日本ベントス学会・日本プランクトン学会合同大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 琉球列島のアザミサンゴ属の局所的空間遺伝構造と表現型2019

    • Author(s)
      中島祐一・Wepfer PH・御手洗哲司
    • Organizer
      日本サンゴ礁学会第22回大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 琉球列島のアザミサンゴ属の局所集団遺伝構造2019

    • Author(s)
      中島祐一・Wepfer PH・御手洗哲司
    • Organizer
      日本生態学会第66回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] The phylogeography of Galaxea2018

    • Author(s)
      Wepfer PH, Nakajima Y, Sutthacheep M, Radice V, Richards Z, Ang P, Fujimura A, Sudek M, Reimer J, Chen A, Teraneo TI, Toonen R, Mikheyev AS, Economo EP, Mitarai S
    • Organizer
      4th Asia-Pacific Coral Reef Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Species composition of pocilloporid recruitment in the southwestern coast of Shikoku island, Japan: the first step for estimating local connectivity relationship2018

    • Author(s)
      Sano S, Nakajima Y, Mezaki T, Nakamura M
    • Organizer
      4th Asia-Pacific Coral Reef Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 屋外水槽で飼育されたホソエダハナヤサイサンゴPocillopora acutaの繁殖特性2018

    • Author(s)
      中島祐一・Chuang P-S・上田延朗・御手洗哲司
    • Organizer
      日本サンゴ礁学会第21回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Dispersal patterns of the coral Galaxea fascicularis across the northwestern Pacific Ocean2018

    • Author(s)
      Wepfer PH, Nakajima Y, Economo EP, Mikheyev A, Mitarai S
    • Organizer
      2018 Ocean Science Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fine-scale variation in the Symbiodinium community composition between Galaxea fascicularis colonies2017

    • Author(s)
      Wepfer PH, Nakajima Y, Economo EP, Mitarai S
    • Organizer
      European Coral Reef Symposium 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Coral recruitment in subtropical and temperate coral communities in Japan: implications for community sustainability2017

    • Author(s)
      Nakamura M, Sakai K, Nakajima Y, Mitarai S, Kohno H, Mezaki T, Nomura K, Yokochi H
    • Organizer
      European Coral Reef Symposium 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research

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Published: 2016-04-21   Modified: 2022-08-19  

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